| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
Click here to switch to the map view.
The map label for this gene is 218929115
Identifier: 218929115
GI number: 218929115
Start: 2277593
End: 2278435
Strand: Reverse
Name: 218929115
Synonym: YPO2005
Alternate gene names: NA
Gene position: 2278435-2277593 (Counterclockwise)
Preceding gene: 218929119
Following gene: 218929111
Centisome position: 48.96
GC content: 45.91
Gene sequence:
>843_bases ATGCGTTTCTTTTTTCTGTTTACACTGGCTGGAGTGATTTCTGTTAGTGCTGTAACGAATTCACACGCAGCCAATAGTGC CGAACGTCGCTGTGGCTGGTTTGAAAACCCGACTCCAGTTAATGCTACGCTGACTGATCGTGATGGCATGTGGGAAATCG GTACTCAAGGCGGCTATCAGGCGAAAGGTGACTGGCCTGGATTTAGTCCTGCCCAATGGGTTCGTACCGGGAATGGAAAC TATGGTTATGGCTGTGCCTGCATCACTGCGGATACAGACCCCACGACACAGCGCATGAATAATCTGACTAAAGCAACGGC TCGTCCTCTAAGTGCCTGCCGTACAGATAAATCACTCAAAGAACCAGAAAATCCGTTAGCAGAGATGCGACAGATAGCCT TATATCAGGGCAATGGTTTCAGCTTCAGTTATCCAAGCACTTGGTCAGTCAAAAAAGAAAAGCAATGCGTCAGTCTCAAT CAGCCAGAACGGGTGACTGAGGAAGAATACACGTTAAATATTTGTGTTCAGCATGGCACTCTGGAACAGGCGACAGACAG TATGATTTTTTATAACGATAACGGTGTCTGGATGCGGGAAGCGGGAATGGATGCCCCTAGCCCTGTCGATATAATTAAAG GGCCAGGCTGGAAAGGGATGCAGACTACGCAGACGTGTGGCGTCAGTGATGAAGAAACTGGTTTTCATGCCGCGGGTGGC ACCTGTTTTATGGCAATTGTTTATGATGCTAAAACACAATTATTGTTTGATACGGTTGGTTTTTACCAGAATTTTGATGT CATCAACATGATTGTTCAGTCTGTTAAATTTACCGAAAAATAA
Upstream 100 bases:
>100_bases CTGCTGTCTCATGAAGTTTCACTGAATTTCATAAAAATCGAAAAAACCGATAAAATCCACGTGCTTGCGTGGATTTTTTG TTTTCATATAAGGATATTTC
Downstream 100 bases:
>100_bases TGTTTATACCGCAATAATAAGCCGTGAAAGTTTTTTTTTGTTTTCATAACATCTTAGGTGGTAAGCGAATCGCCACGCGG CATGAGTAAAAAACTTAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MRFFFLFTLAGVISVSAVTNSHAANSAERRCGWFENPTPVNATLTDRDGMWEIGTQGGYQAKGDWPGFSPAQWVRTGNGN YGYGCACITADTDPTTQRMNNLTKATARPLSACRTDKSLKEPENPLAEMRQIALYQGNGFSFSYPSTWSVKKEKQCVSLN QPERVTEEEYTLNICVQHGTLEQATDSMIFYNDNGVWMREAGMDAPSPVDIIKGPGWKGMQTTQTCGVSDEETGFHAAGG TCFMAIVYDAKTQLLFDTVGFYQNFDVINMIVQSVKFTEK
Sequences:
>Translated_280_residues MRFFFLFTLAGVISVSAVTNSHAANSAERRCGWFENPTPVNATLTDRDGMWEIGTQGGYQAKGDWPGFSPAQWVRTGNGN YGYGCACITADTDPTTQRMNNLTKATARPLSACRTDKSLKEPENPLAEMRQIALYQGNGFSFSYPSTWSVKKEKQCVSLN QPERVTEEEYTLNICVQHGTLEQATDSMIFYNDNGVWMREAGMDAPSPVDIIKGPGWKGMQTTQTCGVSDEETGFHAAGG TCFMAIVYDAKTQLLFDTVGFYQNFDVINMIVQSVKFTEK >Mature_280_residues MRFFFLFTLAGVISVSAVTNSHAANSAERRCGWFENPTPVNATLTDRDGMWEIGTQGGYQAKGDWPGFSPAQWVRTGNGN YGYGCACITADTDPTTQRMNNLTKATARPLSACRTDKSLKEPENPLAEMRQIALYQGNGFSFSYPSTWSVKKEKQCVSLN QPERVTEEEYTLNICVQHGTLEQATDSMIFYNDNGVWMREAGMDAPSPVDIIKGPGWKGMQTTQTCGVSDEETGFHAAGG TCFMAIVYDAKTQLLFDTVGFYQNFDVINMIVQSVKFTEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31004; Mature: 31004
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFFFLFTLAGVISVSAVTNSHAANSAERRCGWFENPTPVNATLTDRDGMWEIGTQGGYQ CEEEHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCEEEECCCCCEEECCCCCCC AKGDWPGFSPAQWVRTGNGNYGYGCACITADTDPTTQRMNNLTKATARPLSACRTDKSLK CCCCCCCCCHHHHEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHC EPENPLAEMRQIALYQGNGFSFSYPSTWSVKKEKQCVSLNQPERVTEEEYTLNICVQHGT CCCCHHHHHHHEEEEECCCEEECCCCCCCCCCCCHHCCCCCCCCCCCCCEEEEEEEECCC LEQATDSMIFYNDNGVWMREAGMDAPSPVDIIKGPGWKGMQTTQTCGVSDEETGFHAAGG HHHCCCCEEEECCCCEEEEECCCCCCCCCCEEECCCCCCCCCHHCCCCCCCCCCEECCCC TCFMAIVYDAKTQLLFDTVGFYQNFDVINMIVQSVKFTEK EEEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MRFFFLFTLAGVISVSAVTNSHAANSAERRCGWFENPTPVNATLTDRDGMWEIGTQGGYQ CEEEHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCEEEECCCCCEEECCCCCCC AKGDWPGFSPAQWVRTGNGNYGYGCACITADTDPTTQRMNNLTKATARPLSACRTDKSLK CCCCCCCCCHHHHEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHC EPENPLAEMRQIALYQGNGFSFSYPSTWSVKKEKQCVSLNQPERVTEEEYTLNICVQHGT CCCCHHHHHHHEEEEECCCEEECCCCCCCCCCCCHHCCCCCCCCCCCCCEEEEEEEECCC LEQATDSMIFYNDNGVWMREAGMDAPSPVDIIKGPGWKGMQTTQTCGVSDEETGFHAAGG HHHCCCCEEEECCCCEEEEECCCCCCCCCCEEECCCCCCCCCHHCCCCCCCCCCEECCCC TCFMAIVYDAKTQLLFDTVGFYQNFDVINMIVQSVKFTEK EEEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA