| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218929093
Identifier: 218929093
GI number: 218929093
Start: 2251817
End: 2252971
Strand: Direct
Name: 218929093
Synonym: YPO1983
Alternate gene names: NA
Gene position: 2251817-2252971 (Clockwise)
Preceding gene: 218929092
Following gene: 218929094
Centisome position: 48.39
GC content: 48.14
Gene sequence:
>1155_bases ATGATTTACCTCGCGGCCATCTGGCTGGGCATCTTGTTGTTTAAGCTGATTTTTACGCTACGAATGATGAAGAGAGGGAC GCAGGCAGGGTGTGGCGTACCACAAGCCACCGCCACGATATTGCAACCTGTGTTGAGCGGTGATCCACAATTGGCAACCG TGCTGGAGGCAAACGTCGTTGCACTAAAACAGGCACGTTTTTTTTGGCTTATTGACGATGATGATACGGTGGCAAGAGAG ATAGCCATCAGTATTCAGTCGCGTTATCCCGACAGGGAAATTAAGGCAAGCTATTTCCCCCCAGCGCCTGAAGGGGTTAA TCCTAAAGTTTTCAAGCTCGAACAGGCCTGGCGGGAGGTGGCGAGTGACATCTTATTGGTATTGGACGACGATGCGTTTT TGTCAGCAGAGTCTTTCGGGACGCTATTGAACCAGATTGAAGAGGGCGCATTAGTGACCGCGCTTCCTTATTATTGTGCC GATAGCAATGGGTACTCCCGGCTATTGGCGCAATTCGTTAATGATAATTCCGGTTTCACCTACCTGCCCTTGTTGCCGTT TTCACCCCCCTTAACCATCAATGGGATGTGTTATGCGATATCCGTCAATACGTTGGCTCAAGTGGGGGGCTTTGCCGCTA TTCTACACGACCTGGCCGATGATCTGGCGTTGGCAACCCTGCTCAGACAACATCATATTCGTCTAATACAATCCACCGCC CCAGTAAGGGTTCAAACCAGTCTTTCTTCTGGCAAAAAGTATATACAACAAATGCATCGTTGGTTTTTGTTTGCCACGCT ACTGTTGCGTGAAAAAACAGTGCTGATAAAACTGATTATATTTCTGCTACAGGGGCTGCATCCTTTACTCATGTGGGCGA TGTTACTCACTGTTGGATGGGAGTGGGTGACGGCGGCCCACGGCATCACAGGGATTAACCTGGGCATTATTGCGGCTTGT TTGCTGATACGCCATGCTGCCCTCCGTCACGTTCAGCAGGCCATTGCCCCTGATATCCGTTCAAATCCTATTTTTTCGCT GTTATCTGAATTAATGCAACCGTTACATTTATTACATGCGTTGTGTAACCGAACGATTTACTGGCGTACGCGGCGCTATC GTGTTTTGAGTAATAAAAAGTTTAATTCACTATGA
Upstream 100 bases:
>100_bases CATTGGATGTGAGTGCGGCTATACACGATTTTGGTTCGCCATCCCGTTCCCTTTCTCAAGGGCTAGATGCCTTTATTCGC TGGTACAAGGAACAGAAATA
Downstream 100 bases:
>100_bases ATAAGATAACCTTACAGATAGCTTATATTACCGGCCGTAGCTCGCCAGAAAGCGGCAGTTTAAGCCCGGTTCAATTAGCC TTTATCAAAAAATTAGCTCA
Product: putative glycosyl transferase
Products: NA
Alternate protein names: Nucleoside-Diphosphate-Sugar Epimerase; Cell Wall Biosynthesis Glycosyltransferase-Like Protein
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MIYLAAIWLGILLFKLIFTLRMMKRGTQAGCGVPQATATILQPVLSGDPQLATVLEANVVALKQARFFWLIDDDDTVARE IAISIQSRYPDREIKASYFPPAPEGVNPKVFKLEQAWREVASDILLVLDDDAFLSAESFGTLLNQIEEGALVTALPYYCA DSNGYSRLLAQFVNDNSGFTYLPLLPFSPPLTINGMCYAISVNTLAQVGGFAAILHDLADDLALATLLRQHHIRLIQSTA PVRVQTSLSSGKKYIQQMHRWFLFATLLLREKTVLIKLIIFLLQGLHPLLMWAMLLTVGWEWVTAAHGITGINLGIIAAC LLIRHAALRHVQQAIAPDIRSNPIFSLLSELMQPLHLLHALCNRTIYWRTRRYRVLSNKKFNSL
Sequences:
>Translated_384_residues MIYLAAIWLGILLFKLIFTLRMMKRGTQAGCGVPQATATILQPVLSGDPQLATVLEANVVALKQARFFWLIDDDDTVARE IAISIQSRYPDREIKASYFPPAPEGVNPKVFKLEQAWREVASDILLVLDDDAFLSAESFGTLLNQIEEGALVTALPYYCA DSNGYSRLLAQFVNDNSGFTYLPLLPFSPPLTINGMCYAISVNTLAQVGGFAAILHDLADDLALATLLRQHHIRLIQSTA PVRVQTSLSSGKKYIQQMHRWFLFATLLLREKTVLIKLIIFLLQGLHPLLMWAMLLTVGWEWVTAAHGITGINLGIIAAC LLIRHAALRHVQQAIAPDIRSNPIFSLLSELMQPLHLLHALCNRTIYWRTRRYRVLSNKKFNSL >Mature_384_residues MIYLAAIWLGILLFKLIFTLRMMKRGTQAGCGVPQATATILQPVLSGDPQLATVLEANVVALKQARFFWLIDDDDTVARE IAISIQSRYPDREIKASYFPPAPEGVNPKVFKLEQAWREVASDILLVLDDDAFLSAESFGTLLNQIEEGALVTALPYYCA DSNGYSRLLAQFVNDNSGFTYLPLLPFSPPLTINGMCYAISVNTLAQVGGFAAILHDLADDLALATLLRQHHIRLIQSTA PVRVQTSLSSGKKYIQQMHRWFLFATLLLREKTVLIKLIIFLLQGLHPLLMWAMLLTVGWEWVTAAHGITGINLGIIAAC LLIRHAALRHVQQAIAPDIRSNPIFSLLSELMQPLHLLHALCNRTIYWRTRRYRVLSNKKFNSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4507811, Length=377, Percent_Identity=22.0159151193634, Blast_Score=69, Evalue=7e-12, Organism=Caenorhabditis elegans, GI25147526, Length=394, Percent_Identity=20.8121827411168, Blast_Score=75, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42988; Mature: 42988
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYLAAIWLGILLFKLIFTLRMMKRGTQAGCGVPQATATILQPVLSGDPQLATVLEANVV CEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH ALKQARFFWLIDDDDTVAREIAISIQSRYPDREIKASYFPPAPEGVNPKVFKLEQAWREV HEECCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH ASDILLVLDDDAFLSAESFGTLLNQIEEGALVTALPYYCADSNGYSRLLAQFVNDNSGFT HHCEEEEECCCCHHHHHHHHHHHHHHHCCCEEEECHHHHCCCCCHHHHHHHHHCCCCCEE YLPLLPFSPPLTINGMCYAISVNTLAQVGGFAAILHDLADDLALATLLRQHHIRLIQSTA EEEECCCCCCCEECCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PVRVQTSLSSGKKYIQQMHRWFLFATLLLREKTVLIKLIIFLLQGLHPLLMWAMLLTVGW CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH EWVTAAHGITGINLGIIAACLLIRHAALRHVQQAIAPDIRSNPIFSLLSELMQPLHLLHA HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH LCNRTIYWRTRRYRVLSNKKFNSL HHCCEEEEEHHHHHHHCCCCCCCC >Mature Secondary Structure MIYLAAIWLGILLFKLIFTLRMMKRGTQAGCGVPQATATILQPVLSGDPQLATVLEANVV CEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH ALKQARFFWLIDDDDTVAREIAISIQSRYPDREIKASYFPPAPEGVNPKVFKLEQAWREV HEECCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH ASDILLVLDDDAFLSAESFGTLLNQIEEGALVTALPYYCADSNGYSRLLAQFVNDNSGFT HHCEEEEECCCCHHHHHHHHHHHHHHHCCCEEEECHHHHCCCCCHHHHHHHHHCCCCCEE YLPLLPFSPPLTINGMCYAISVNTLAQVGGFAAILHDLADDLALATLLRQHHIRLIQSTA EEEECCCCCCCEECCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PVRVQTSLSSGKKYIQQMHRWFLFATLLLREKTVLIKLIIFLLQGLHPLLMWAMLLTVGW CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH EWVTAAHGITGINLGIIAACLLIRHAALRHVQQAIAPDIRSNPIFSLLSELMQPLHLLHA HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH LCNRTIYWRTRRYRVLSNKKFNSL HHCCEEEEEHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA