| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218929062
Identifier: 218929062
GI number: 218929062
Start: 2210008
End: 2210319
Strand: Direct
Name: 218929062
Synonym: YPO1948
Alternate gene names: NA
Gene position: 2210008-2210319 (Clockwise)
Preceding gene: 218929061
Following gene: 218929063
Centisome position: 47.49
GC content: 45.83
Gene sequence:
>312_bases ATGAAAATATTGCTGTTAGTGGCGAGTATGGGAGTGTTCAGCGTAGCCGTACAAGCTGCTGACGGTGAACATATCTATAA GCAAACATGCTCAAGTTGTCACGGGCGTTCGGCAGATAGGAAAGGCCTTGATAAAGCACCGCCATTGATTTCATTATCCA GAGATGAAATTGTTGATGGCTTGACGGCGCGGCGTGATGGCAAGATTATTGGCCGAGGCAATAAGGCCAAAGCTCATCTT AGTGATGATGATATTCAACAGTTGGCTGACCACATTCAGCATCTGAAAACCGCGAAACCTAAAACTCCCTAA
Upstream 100 bases:
>100_bases TGATTGACCGCAATGGCAAGGTCATTGAATGGCATCAGGGTGTGCGTAATGAGCAGGAACTGACCGCTTTATTTAAACAG AAGGTGTCAGAGAAACAATG
Downstream 100 bases:
>100_bases TACACCTCGTTAAAGTATTATCCTCACAATACTTAGTGCAGTGAACATCAGGGGACAGGCCATCAACAGCACATTTTCCC TTGTATGATTTAGCGACTTC
Product: putative cytochrome
Products: NA
Alternate protein names: Cytochrome C-
Number of amino acids: Translated: 103; Mature: 103
Protein sequence:
>103_residues MKILLLVASMGVFSVAVQAADGEHIYKQTCSSCHGRSADRKGLDKAPPLISLSRDEIVDGLTARRDGKIIGRGNKAKAHL SDDDIQQLADHIQHLKTAKPKTP
Sequences:
>Translated_103_residues MKILLLVASMGVFSVAVQAADGEHIYKQTCSSCHGRSADRKGLDKAPPLISLSRDEIVDGLTARRDGKIIGRGNKAKAHL SDDDIQQLADHIQHLKTAKPKTP >Mature_103_residues MKILLLVASMGVFSVAVQAADGEHIYKQTCSSCHGRSADRKGLDKAPPLISLSRDEIVDGLTARRDGKIIGRGNKAKAHL SDDDIQQLADHIQHLKTAKPKTP
Specific function: Unknown
COG id: COG2863
COG function: function code C; Cytochrome c553
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11126; Mature: 11126
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILLLVASMGVFSVAVQAADGEHIYKQTCSSCHGRSADRKGLDKAPPLISLSRDEIVDG CEEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCHHHHHHH LTARRDGKIIGRGNKAKAHLSDDDIQQLADHIQHLKTAKPKTP HHCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKILLLVASMGVFSVAVQAADGEHIYKQTCSSCHGRSADRKGLDKAPPLISLSRDEIVDG CEEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCHHHHHHH LTARRDGKIIGRGNKAKAHLSDDDIQQLADHIQHLKTAKPKTP HHCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA