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The map label for this gene is ybjZ [C]

Identifier: 218929059

GI number: 218929059

Start: 2207641

End: 2208804

Strand: Direct

Name: ybjZ [C]

Synonym: YPO1945

Alternate gene names: 218929059

Gene position: 2207641-2208804 (Clockwise)

Preceding gene: 218929058

Following gene: 218929060

Centisome position: 47.44

GC content: 49.23

Gene sequence:

>1164_bases
ATGGCCGGTAATCATCATAAAGGCAATGATGGCATGAAAGGCAATGATAGTATGTTTTGGCGGTTGGTGCTGCGTGCGCT
TCGTTTACGTATGCAACGTGTCAGTGTCGTCTTTGCCGCACTGACCGTTGGCGCGGCGATTGTTACCGCAATGTCGGCAG
TCTATTTCGATATTAATGCCAAAATGAGTCAGGAATTACGGACATTCGGCGCTAATTTTTATATTGGCCCAGGCCAGGGT
AGTACCTTTGAACAGCAGACTTTTCAACCCATTATTGATTCCGCGCCGAAAGGTCTGATTAATGCTTCCAGTCCCTATAT
TTATGGTATGGCTCGTACCGAGCTGGAAAAAGTGGTTTTGATGGGCGTCTGGTTTGAATCCTTGCAACAGTTAGTCCCCT
ATTGGCAGGTAACCGGCAATTGGATCGGGGTCAGTTTTGATGATCGCAATGCGATGATCGGTGCCAAACTGGCGGAACGT
TTGCATGTCAATGTAGGCGATACCCTAACATTGGTGGGCGAAGGGACCCGCCAACGCTTACAAATAAAAGGTATTGTTGA
AGCAGGTGACGCGACCGATAACATGTTGATCGTCAATTTGGAGCTGGCGCAAAAGTGGCTCAATCAACCTGAGCGGATCA
GTAATGCATTACTGAGTGTCAGCAATGATGTTGGGCAGGTAGAAACCTTTGCCAGTCATCTACGCGAACAATATCCAGAT
CTGGAAATTCGCCCAATTCGCAAAGTATCTGCCTCTGAGGGGCAGGTTCTTGACAAGATAAAAGGGTTGATGGGGCTGGT
CTCGGTGGTCATCCTCATTCTCTCCTCTCTGTGTGTCAATACCACGTTGATGGCGATAGTGGGTGAACGTTCGAAAGAGT
TTGCGTTGCAAAAAGCACTGGGTGCCAGTGGGCGTGACATTATCCGCCAAATGTTGACTGAAACGATGATTATTTCGCTA
GCCGCCGCGGTCTGTGGTGCTGTGTTAGGGTATTTGCTGGCTCAGGTCTTGGGGCAGGCGGTGTTCAGTGCGGCAATTAC
ATTGCGTGCACCGGTATTGCCGCTAACCTTGGTGCTTTCGTTGTTTGTTGCCGCTGTGGCGGCGATTGTTCCCACCCGAC
GGGCTATTCATATTGAACCCGCTAAAGTTCTTAAAGGAGAGTAG

Upstream 100 bases:

>100_bases
GTCGTGCCTTGTGTGTTGGTGCTATCGGTATTGATAGCCGTGTTTGGCACCTGGTTCCCCGCTCGTCGTATTACTCGCCT
CTACCCGGTGGAGGTGCTAT

Downstream 100 bases:

>100_bases
CGAATGACCTCGTCAATCATAGGGATGAAACCTGAACATCTGGCTGATGCCGTTATTGAAACCCGACATTTGTATAAGCG
CTTTGGTCAAGTTACGGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: ABC Transporter Permease; ABC Transporter Membrane Protein; ABC Transporter Permease Protein; ABC Efflux Pump Inner Membrane Subunit; Integral Membrane Protein; Efflux ABC Transporter Permease; Lipoprotein ABC Transporter Permease; Permease Domain-Containing Protein; Efflux ABC Transporter Permease Protein; Integral Membrane Protein Putative Permease; Integral Membrane Protein-Permease Component; Hydrogenase 4 Membrane Subunit; ABC-Type Transport System Permease Component; ABC Transporter; Outer Membrane Protein Putative Permease

Number of amino acids: Translated: 387; Mature: 386

Protein sequence:

>387_residues
MAGNHHKGNDGMKGNDSMFWRLVLRALRLRMQRVSVVFAALTVGAAIVTAMSAVYFDINAKMSQELRTFGANFYIGPGQG
STFEQQTFQPIIDSAPKGLINASSPYIYGMARTELEKVVLMGVWFESLQQLVPYWQVTGNWIGVSFDDRNAMIGAKLAER
LHVNVGDTLTLVGEGTRQRLQIKGIVEAGDATDNMLIVNLELAQKWLNQPERISNALLSVSNDVGQVETFASHLREQYPD
LEIRPIRKVSASEGQVLDKIKGLMGLVSVVILILSSLCVNTTLMAIVGERSKEFALQKALGASGRDIIRQMLTETMIISL
AAAVCGAVLGYLLAQVLGQAVFSAAITLRAPVLPLTLVLSLFVAAVAAIVPTRRAIHIEPAKVLKGE

Sequences:

>Translated_387_residues
MAGNHHKGNDGMKGNDSMFWRLVLRALRLRMQRVSVVFAALTVGAAIVTAMSAVYFDINAKMSQELRTFGANFYIGPGQG
STFEQQTFQPIIDSAPKGLINASSPYIYGMARTELEKVVLMGVWFESLQQLVPYWQVTGNWIGVSFDDRNAMIGAKLAER
LHVNVGDTLTLVGEGTRQRLQIKGIVEAGDATDNMLIVNLELAQKWLNQPERISNALLSVSNDVGQVETFASHLREQYPD
LEIRPIRKVSASEGQVLDKIKGLMGLVSVVILILSSLCVNTTLMAIVGERSKEFALQKALGASGRDIIRQMLTETMIISL
AAAVCGAVLGYLLAQVLGQAVFSAAITLRAPVLPLTLVLSLFVAAVAAIVPTRRAIHIEPAKVLKGE
>Mature_386_residues
AGNHHKGNDGMKGNDSMFWRLVLRALRLRMQRVSVVFAALTVGAAIVTAMSAVYFDINAKMSQELRTFGANFYIGPGQGS
TFEQQTFQPIIDSAPKGLINASSPYIYGMARTELEKVVLMGVWFESLQQLVPYWQVTGNWIGVSFDDRNAMIGAKLAERL
HVNVGDTLTLVGEGTRQRLQIKGIVEAGDATDNMLIVNLELAQKWLNQPERISNALLSVSNDVGQVETFASHLREQYPDL
EIRPIRKVSASEGQVLDKIKGLMGLVSVVILILSSLCVNTTLMAIVGERSKEFALQKALGASGRDIIRQMLTETMIISLA
AAVCGAVLGYLLAQVLGQAVFSAAITLRAPVLPLTLVLSLFVAAVAAIVPTRRAIHIEPAKVLKGE

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42047; Mature: 41916

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGNHHKGNDGMKGNDSMFWRLVLRALRLRMQRVSVVFAALTVGAAIVTAMSAVYFDINA
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCH
KMSQELRTFGANFYIGPGQGSTFEQQTFQPIIDSAPKGLINASSPYIYGMARTELEKVVL
HHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHH
MGVWFESLQQLVPYWQVTGNWIGVSFDDRNAMIGAKLAERLHVNVGDTLTLVGEGTRQRL
HHHHHHHHHHHCCHHEECCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHEE
QIKGIVEAGDATDNMLIVNLELAQKWLNQPERISNALLSVSNDVGQVETFASHLREQYPD
EEEEEEECCCCCCCEEEEEHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
LEIRPIRKVSASEGQVLDKIKGLMGLVSVVILILSSLCVNTTLMAIVGERSKEFALQKAL
CCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
GASGRDIIRQMLTETMIISLAAAVCGAVLGYLLAQVLGQAVFSAAITLRAPVLPLTLVLS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
LFVAAVAAIVPTRRAIHIEPAKVLKGE
HHHHHHHHHHCCCCEEEECHHHHCCCC
>Mature Secondary Structure 
AGNHHKGNDGMKGNDSMFWRLVLRALRLRMQRVSVVFAALTVGAAIVTAMSAVYFDINA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCH
KMSQELRTFGANFYIGPGQGSTFEQQTFQPIIDSAPKGLINASSPYIYGMARTELEKVVL
HHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHH
MGVWFESLQQLVPYWQVTGNWIGVSFDDRNAMIGAKLAERLHVNVGDTLTLVGEGTRQRL
HHHHHHHHHHHCCHHEECCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHEE
QIKGIVEAGDATDNMLIVNLELAQKWLNQPERISNALLSVSNDVGQVETFASHLREQYPD
EEEEEEECCCCCCCEEEEEHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
LEIRPIRKVSASEGQVLDKIKGLMGLVSVVILILSSLCVNTTLMAIVGERSKEFALQKAL
CCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
GASGRDIIRQMLTETMIISLAAAVCGAVLGYLLAQVLGQAVFSAAITLRAPVLPLTLVLS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
LFVAAVAAIVPTRRAIHIEPAKVLKGE
HHHHHHHHHHCCCCEEEECHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA