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The map label for this gene is alpA [C]

Identifier: 218929019

GI number: 218929019

Start: 2138715

End: 2138996

Strand: Reverse

Name: alpA [C]

Synonym: YPO1904

Alternate gene names: 218929019

Gene position: 2138996-2138715 (Counterclockwise)

Preceding gene: 218929020

Following gene: 218929018

Centisome position: 45.96

GC content: 43.62

Gene sequence:

>282_bases
TTGCATCCCTTATTTAGGGCTCACCAGCTTTCTCTCAGGCTTCCACTGTGTTTTTTTATTCTCCGGCCACCGTTTATTTC
AGTCACAGGAGGATATATGACATCTTATCAGTTACTACGCCTCAGACAGGTTGAGCAAAAAACAGGGCTGAAGCGTTCAC
AGATATACCTTTATATGAAAGAGGGTGCATTTCCCCGTTCAATAAAAATAGGCCCTGCTAGTGTTGCCTGGCTCGAGTCT
GAGATTGACGAGTGGATCAACAAAAAGTTATCTGACCGATAA

Upstream 100 bases:

>100_bases
ACACTGAAAAATGCGCTGAAGCGTGGTTCGCCATCTTCGACATCCTTATCCGGCTAATACCATCCCCATTTGTAATGGCC
GACAACCCTAAATAAGGGTT

Downstream 100 bases:

>100_bases
AGACGCAATGAGGAGAAGATGATGAACATTAATATCCCGGCACTCATAAACTTCGATCCTGCAGGTATAAAAAAAAGCAC
CTGCATGTATATTTCAGACC

Product: putative transcriptional regulator

Products: NA

Alternate protein names: Phage Transcriptional Regulator; Transcriptional Regulator AlpA Family; Transcriptional Regulator; Prophage Regulatory Protein

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MHPLFRAHQLSLRLPLCFFILRPPFISVTGGYMTSYQLLRLRQVEQKTGLKRSQIYLYMKEGAFPRSIKIGPASVAWLES
EIDEWINKKLSDR

Sequences:

>Translated_93_residues
MHPLFRAHQLSLRLPLCFFILRPPFISVTGGYMTSYQLLRLRQVEQKTGLKRSQIYLYMKEGAFPRSIKIGPASVAWLES
EIDEWINKKLSDR
>Mature_93_residues
MHPLFRAHQLSLRLPLCFFILRPPFISVTGGYMTSYQLLRLRQVEQKTGLKRSQIYLYMKEGAFPRSIKIGPASVAWLES
EIDEWINKKLSDR

Specific function: Positive Regulator Of The Expression Of The Slpa Gene. [C]

COG id: COG3311

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10912; Mature: 10912

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHPLFRAHQLSLRLPLCFFILRPPFISVTGGYMTSYQLLRLRQVEQKTGLKRSQIYLYMK
CCCCCCHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCHHEEEEEC
EGAFPRSIKIGPASVAWLESEIDEWINKKLSDR
CCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MHPLFRAHQLSLRLPLCFFILRPPFISVTGGYMTSYQLLRLRQVEQKTGLKRSQIYLYMK
CCCCCCHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCHHEEEEEC
EGAFPRSIKIGPASVAWLESEIDEWINKKLSDR
CCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA