| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
Click here to switch to the map view.
The map label for this gene is flgI
Identifier: 218928926
GI number: 218928926
Start: 2049570
End: 2050679
Strand: Direct
Name: flgI
Synonym: YPO1806
Alternate gene names: 218928926
Gene position: 2049570-2050679 (Clockwise)
Preceding gene: 218928925
Following gene: 218928927
Centisome position: 44.04
GC content: 54.59
Gene sequence:
>1110_bases ATGCGTAAACAGTCACTTGTCACTCTACTTATGGTCCTGCTCTCGCTGGTTTGGCTACCGGCCTCGGCGGAGCGTATCCG CGATTTGGTGACCGTTCAAGGGGTGCGTGATAACGCGCTGATTGGTTATGGGCTTGTGGTTGGGCTAGATGGCTCCGGTG ACCAAACCATGCAAACCCCGTTTACCACGCAAAGCTTGAGCAATATGTTGTCGCAGTTGGGGATCACCGTCCCCCCCGGC ACCAATATGCAACTTAAAAACGTGGCGGCGGTGATGGTTACTGCCAAGTTACCGGCCTTCTCCCGCGCAGGGCAAACCAT TGATGTCGTGGTTTCCTCAATGGGTAACGCGAAGAGTATCCGTGGTGGCACGTTGTTAATGACCCCACTGAAAGGGGTGG ATAATCAGGTTTACGCGTTGGCGCAGGGTAACGTACTGGTTGGGGGCGCAGGTGCCGCCGCCGGTGGCAGCAGTGTTCAG GTGAACCAATTGGCGGGTGGCCGTATCAGCAACGGCGCGACGATCGAACGTGAATTACCGACCACTTTTGGCACCGATGG CATCATTAACCTGCAATTGAATAGTGAAGATTTCACGTTGGCCCAGCAAGTCAGTGATGCCATTAACCGCCAGCGCGGTT TCGGTTCAGCGACAGCCATTGATGCGCGCACCATTCAGGTGCTGGTGCCACGTGGCGGCAGTTCACAGGTCCGTTTTCTG GCGGATATCCAGAACATCCCGATCAATGTGGATCCGGGCGACGCCAAAGTGATTATCAACTCCCGGACGGGCTCTGTGGT GATGAACCGCAATGTGGTGTTGGACTCCTGTGCGGTGGCGCAAGGGAATCTGTCAGTGGTGGTGGATAAACAGAATATTG TCAGCCAACCGGATACGCCGTTTGGTGGTGGTCAGACCGTGGTGACGCCGAATACCCAAATTTCTGTTCAGCAACAGGGC GGGGTCTTACAGCGGGTTAATGCCAGTCCAAACCTGAATAATGTGGTCCGTGCGCTGAATTCGTTGGGGGCGACACCAAT AGATTTGATGTCCATCTTGCAAGCCATGGAGAGTGCTGGTTGCTTGCGGGCTAAATTGGAAATTATCTAA
Upstream 100 bases:
>100_bases TCGAGTATGTGGGGAATGGGTATATCAATGAAGCGCAAACCATGGGCTGGTTACAGCGGTTCTTCCTTAATGTTTCGCCG TACTAAGAAGAGGCGTCCAA
Downstream 100 bases:
>100_bases TGAGTGATTTACTGGCGATGTCCGGGGCGGCGTATGACGCCCAGTCATTGGAGGCCCTGAAACGGGATGCAGCACGGGAT CCCGAAGGCAATCTGAAGCA
Product: flagellar basal body P-ring protein
Products: NA
Alternate protein names: Basal body P-ring protein 1
Number of amino acids: Translated: 369; Mature: 369
Protein sequence:
>369_residues MRKQSLVTLLMVLLSLVWLPASAERIRDLVTVQGVRDNALIGYGLVVGLDGSGDQTMQTPFTTQSLSNMLSQLGITVPPG TNMQLKNVAAVMVTAKLPAFSRAGQTIDVVVSSMGNAKSIRGGTLLMTPLKGVDNQVYALAQGNVLVGGAGAAAGGSSVQ VNQLAGGRISNGATIERELPTTFGTDGIINLQLNSEDFTLAQQVSDAINRQRGFGSATAIDARTIQVLVPRGGSSQVRFL ADIQNIPINVDPGDAKVIINSRTGSVVMNRNVVLDSCAVAQGNLSVVVDKQNIVSQPDTPFGGGQTVVTPNTQISVQQQG GVLQRVNASPNLNNVVRALNSLGATPIDLMSILQAMESAGCLRAKLEII
Sequences:
>Translated_369_residues MRKQSLVTLLMVLLSLVWLPASAERIRDLVTVQGVRDNALIGYGLVVGLDGSGDQTMQTPFTTQSLSNMLSQLGITVPPG TNMQLKNVAAVMVTAKLPAFSRAGQTIDVVVSSMGNAKSIRGGTLLMTPLKGVDNQVYALAQGNVLVGGAGAAAGGSSVQ VNQLAGGRISNGATIERELPTTFGTDGIINLQLNSEDFTLAQQVSDAINRQRGFGSATAIDARTIQVLVPRGGSSQVRFL ADIQNIPINVDPGDAKVIINSRTGSVVMNRNVVLDSCAVAQGNLSVVVDKQNIVSQPDTPFGGGQTVVTPNTQISVQQQG GVLQRVNASPNLNNVVRALNSLGATPIDLMSILQAMESAGCLRAKLEII >Mature_369_residues MRKQSLVTLLMVLLSLVWLPASAERIRDLVTVQGVRDNALIGYGLVVGLDGSGDQTMQTPFTTQSLSNMLSQLGITVPPG TNMQLKNVAAVMVTAKLPAFSRAGQTIDVVVSSMGNAKSIRGGTLLMTPLKGVDNQVYALAQGNVLVGGAGAAAGGSSVQ VNQLAGGRISNGATIERELPTTFGTDGIINLQLNSEDFTLAQQVSDAINRQRGFGSATAIDARTIQVLVPRGGSSQVRFL ADIQNIPINVDPGDAKVIINSRTGSVVMNRNVVLDSCAVAQGNLSVVVDKQNIVSQPDTPFGGGQTVVTPNTQISVQQQG GVLQRVNASPNLNNVVRALNSLGATPIDLMSILQAMESAGCLRAKLEII
Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation
COG id: COG1706
COG function: function code N; Flagellar basal-body P-ring protein
Gene ontology:
Cell location: Periplasm. Bacterial flagellum basal body (By similarity)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flgI family
Homologues:
Organism=Escherichia coli, GI1787320, Length=358, Percent_Identity=79.3296089385475, Blast_Score=517, Evalue=1e-148,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): FLGI1_YERPS (Q66BT8)
Other databases:
- EMBL: BX936398 - RefSeq: YP_070206.1 - ProteinModelPortal: Q66BT8 - GeneID: 2955575 - GenomeReviews: BX936398_GR - KEGG: yps:YPTB1679 - HOGENOM: HBG321070 - OMA: NAVAQMN - ProtClustDB: PRK05303 - BioCyc: YPSE273123:YPTB1679-MONOMER - HAMAP: MF_00416 - InterPro: IPR001782 - PRINTS: PR01010
Pfam domain/function: PF02119 FlgI
EC number: NA
Molecular weight: Translated: 38465; Mature: 38465
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKQSLVTLLMVLLSLVWLPASAERIRDLVTVQGVRDNALIGYGLVVGLDGSGDQTMQTP CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCCCEECC FTTQSLSNMLSQLGITVPPGTNMQLKNVAAVMVTAKLPAFSRAGQTIDVVVSSMGNAKSI CCHHHHHHHHHHCCEECCCCCCEEHHCEEEEEEEECCCCHHHCCCCHHHHHHCCCCCCCC RGGTLLMTPLKGVDNQVYALAQGNVLVGGAGAAAGGSSVQVNQLAGGRISNGATIERELP CCCEEEEECCCCCCCEEEEEEECCEEEECCCCCCCCCCEEEEECCCCCCCCCCEEEEECC TTFGTDGIINLQLNSEDFTLAQQVSDAINRQRGFGSATAIDARTIQVLVPRGGSSQVRFL CCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEECCEEEEEEEECCCCCCEEEE ADIQNIPINVDPGDAKVIINSRTGSVVMNRNVVLDSCAVAQGNLSVVVDKQNIVSQPDTP EECCCCCEEECCCCEEEEEECCCCCEEEECCEEEECEEECCCCEEEEEECHHHCCCCCCC FGGGQTVVTPNTQISVQQQGGVLQRVNASPNLNNVVRALNSLGATPIDLMSILQAMESAG CCCCEEEECCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCC CLRAKLEII CEEEEEEEC >Mature Secondary Structure MRKQSLVTLLMVLLSLVWLPASAERIRDLVTVQGVRDNALIGYGLVVGLDGSGDQTMQTP CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCCCEECC FTTQSLSNMLSQLGITVPPGTNMQLKNVAAVMVTAKLPAFSRAGQTIDVVVSSMGNAKSI CCHHHHHHHHHHCCEECCCCCCEEHHCEEEEEEEECCCCHHHCCCCHHHHHHCCCCCCCC RGGTLLMTPLKGVDNQVYALAQGNVLVGGAGAAAGGSSVQVNQLAGGRISNGATIERELP CCCEEEEECCCCCCCEEEEEEECCEEEECCCCCCCCCCEEEEECCCCCCCCCCEEEEECC TTFGTDGIINLQLNSEDFTLAQQVSDAINRQRGFGSATAIDARTIQVLVPRGGSSQVRFL CCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEECCEEEEEEEECCCCCCEEEE ADIQNIPINVDPGDAKVIINSRTGSVVMNRNVVLDSCAVAQGNLSVVVDKQNIVSQPDTP EECCCCCEEECCCCEEEEEECCCCCEEEECCEEEECEEECCCCEEEEEECHHHCCCCCCC FGGGQTVVTPNTQISVQQQGGVLQRVNASPNLNNVVRALNSLGATPIDLMSILQAMESAG CCCCEEEECCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCC CLRAKLEII CEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA