| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is yecJ [H]
Identifier: 218928863
GI number: 218928863
Start: 1983477
End: 1983716
Strand: Direct
Name: yecJ [H]
Synonym: YPO1738
Alternate gene names: 218928863
Gene position: 1983477-1983716 (Clockwise)
Preceding gene: 218928861
Following gene: 218928865
Centisome position: 42.62
GC content: 41.25
Gene sequence:
>240_bases ATGTCTGAAATGTTAACTAATGACCAAGAATTAGTCTCTGATCTGGTCGCTTGCCAACTGGTCATCAAACAGATTCTTGA TGTTATCGATATCATCGCGCCTACCGAAGTGCGTGATAAAATGTCGCATCAACTCAATACTATCGATTTCTCAACACATC CAGCGGGGGCAGATCCAGTGACCAAAAGAGCAATCGAGAAGGCTATTGCACTGATTGATCTGAAATTTACACAAAAATAG
Upstream 100 bases:
>100_bases GTATAATGCCTCCATGGGATAGCAATTGACAGACTAAAGAAATTTGCAAATAGTCGTGATAGTATTATTCAATATTATTA CTATCTTTAAGGTTTTTTCT
Downstream 100 bases:
>100_bases CGTGATCGATAAGAAAATATCACACTGTGAAGCATGATGACCACATGGCTGAAAAGAGAGAGAACTTATTTTGCTCAATC AGTTGATGAATCATTCAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 79; Mature: 78
Protein sequence:
>79_residues MSEMLTNDQELVSDLVACQLVIKQILDVIDIIAPTEVRDKMSHQLNTIDFSTHPAGADPVTKRAIEKAIALIDLKFTQK
Sequences:
>Translated_79_residues MSEMLTNDQELVSDLVACQLVIKQILDVIDIIAPTEVRDKMSHQLNTIDFSTHPAGADPVTKRAIEKAIALIDLKFTQK >Mature_78_residues SEMLTNDQELVSDLVACQLVIKQILDVIDIIAPTEVRDKMSHQLNTIDFSTHPAGADPVTKRAIEKAIALIDLKFTQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081998, Length=77, Percent_Identity=76.6233766233766, Blast_Score=121, Evalue=9e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020262 - ProDom: PD060536 [H]
Pfam domain/function: PF10964 DUF2766 [H]
EC number: NA
Molecular weight: Translated: 8790; Mature: 8659
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEMLTNDQELVSDLVACQLVIKQILDVIDIIAPTEVRDKMSHQLNTIDFSTHPAGADPV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCHH TKRAIEKAIALIDLKFTQK HHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SEMLTNDQELVSDLVACQLVIKQILDVIDIIAPTEVRDKMSHQLNTIDFSTHPAGADPV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCHH TKRAIEKAIALIDLKFTQK HHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]