| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218928755
Identifier: 218928755
GI number: 218928755
Start: 1841411
End: 1841980
Strand: Direct
Name: 218928755
Synonym: YPO1619
Alternate gene names: NA
Gene position: 1841411-1841980 (Clockwise)
Preceding gene: 218928754
Following gene: 218928756
Centisome position: 39.57
GC content: 39.65
Gene sequence:
>570_bases ATGAGTGCTGGAGAGTCTTCGAATAGCAAGCGAAACTTGGGAGATTATTATGATGTAAAATATTCACAAGGAATGCTAGG GATGAAAAGGAAAGTTTCTATTTCCCGAATGATCAAATGGCGAATAAAGAGAGGAAGGCATCTTCACGAGAGATACAGTA TAGCTCTCGCGATGATGATGAGGGTGGCACGGCAATTTGAGTCTATGCAAGCATCATTCCCTTTCAATTTAGTGACTGAT AGTGGTTTTAGCGGAGAAGATTTAGTATCTGACCTGTTGGGTTTTTATCGAGTTTTTTCCATCCCAAGTCCGTTCGAGAT ATTGCGCCCAGTGAGCAAAGAAGAAGCGTTAAAACGTTGGGATTACTACGGTCCCATAGGTTCGTATAAAAATGAAAATT TTCTGTCATTGTTATTCCCAGATCCAGAAAAATTTCGTAATAGCAAACCCCGTTTGGGATATCTTCCATCATTTATGCAA ACAGTAATACCTTACAATAATTTCAAATCGGGAAATGTGGGGATTGCCTCACAAGATGGTGTTGAAGTTGATACCCATTT CTTAGGATAG
Upstream 100 bases:
>100_bases AGCGCGAATTTCAACGCATGGATGAGTATATACTGAGGTTCTGGGGTGGATAGATTTAGGCCATGCACAGGGAGACGATA TCAGGAACATTCTCCGACAA
Downstream 100 bases:
>100_bases TCGTACAATGAAAAAAGTAGCTATAATTTTTATCGTGTTAATATTAATTGTGGCATTGCCAATGATATATTTTTGGCCGA CGATAAAAGTATTAACGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MSAGESSNSKRNLGDYYDVKYSQGMLGMKRKVSISRMIKWRIKRGRHLHERYSIALAMMMRVARQFESMQASFPFNLVTD SGFSGEDLVSDLLGFYRVFSIPSPFEILRPVSKEEALKRWDYYGPIGSYKNENFLSLLFPDPEKFRNSKPRLGYLPSFMQ TVIPYNNFKSGNVGIASQDGVEVDTHFLG
Sequences:
>Translated_189_residues MSAGESSNSKRNLGDYYDVKYSQGMLGMKRKVSISRMIKWRIKRGRHLHERYSIALAMMMRVARQFESMQASFPFNLVTD SGFSGEDLVSDLLGFYRVFSIPSPFEILRPVSKEEALKRWDYYGPIGSYKNENFLSLLFPDPEKFRNSKPRLGYLPSFMQ TVIPYNNFKSGNVGIASQDGVEVDTHFLG >Mature_188_residues SAGESSNSKRNLGDYYDVKYSQGMLGMKRKVSISRMIKWRIKRGRHLHERYSIALAMMMRVARQFESMQASFPFNLVTDS GFSGEDLVSDLLGFYRVFSIPSPFEILRPVSKEEALKRWDYYGPIGSYKNENFLSLLFPDPEKFRNSKPRLGYLPSFMQT VIPYNNFKSGNVGIASQDGVEVDTHFLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21710; Mature: 21579
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAGESSNSKRNLGDYYDVKYSQGMLGMKRKVSISRMIKWRIKRGRHLHERYSIALAMMM CCCCCCCCCCCCCCCHHCCHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH RVARQFESMQASFPFNLVTDSGFSGEDLVSDLLGFYRVFSIPSPFEILRPVSKEEALKRW HHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHH DYYGPIGSYKNENFLSLLFPDPEKFRNSKPRLGYLPSFMQTVIPYNNFKSGNVGIASQDG HCCCCCCCCCCCCEEEEECCCHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCC VEVDTHFLG CCCCCCCCC >Mature Secondary Structure SAGESSNSKRNLGDYYDVKYSQGMLGMKRKVSISRMIKWRIKRGRHLHERYSIALAMMM CCCCCCCCCCCCCCHHCCHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH RVARQFESMQASFPFNLVTDSGFSGEDLVSDLLGFYRVFSIPSPFEILRPVSKEEALKRW HHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHH DYYGPIGSYKNENFLSLLFPDPEKFRNSKPRLGYLPSFMQTVIPYNNFKSGNVGIASQDG HCCCCCCCCCCCCEEEEECCCHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCC VEVDTHFLG CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA