Definition Yersinia pestis CO92 chromosome, complete genome.
Accession NC_003143
Length 4,653,728

Click here to switch to the map view.

The map label for this gene is 218928755

Identifier: 218928755

GI number: 218928755

Start: 1841411

End: 1841980

Strand: Direct

Name: 218928755

Synonym: YPO1619

Alternate gene names: NA

Gene position: 1841411-1841980 (Clockwise)

Preceding gene: 218928754

Following gene: 218928756

Centisome position: 39.57

GC content: 39.65

Gene sequence:

>570_bases
ATGAGTGCTGGAGAGTCTTCGAATAGCAAGCGAAACTTGGGAGATTATTATGATGTAAAATATTCACAAGGAATGCTAGG
GATGAAAAGGAAAGTTTCTATTTCCCGAATGATCAAATGGCGAATAAAGAGAGGAAGGCATCTTCACGAGAGATACAGTA
TAGCTCTCGCGATGATGATGAGGGTGGCACGGCAATTTGAGTCTATGCAAGCATCATTCCCTTTCAATTTAGTGACTGAT
AGTGGTTTTAGCGGAGAAGATTTAGTATCTGACCTGTTGGGTTTTTATCGAGTTTTTTCCATCCCAAGTCCGTTCGAGAT
ATTGCGCCCAGTGAGCAAAGAAGAAGCGTTAAAACGTTGGGATTACTACGGTCCCATAGGTTCGTATAAAAATGAAAATT
TTCTGTCATTGTTATTCCCAGATCCAGAAAAATTTCGTAATAGCAAACCCCGTTTGGGATATCTTCCATCATTTATGCAA
ACAGTAATACCTTACAATAATTTCAAATCGGGAAATGTGGGGATTGCCTCACAAGATGGTGTTGAAGTTGATACCCATTT
CTTAGGATAG

Upstream 100 bases:

>100_bases
AGCGCGAATTTCAACGCATGGATGAGTATATACTGAGGTTCTGGGGTGGATAGATTTAGGCCATGCACAGGGAGACGATA
TCAGGAACATTCTCCGACAA

Downstream 100 bases:

>100_bases
TCGTACAATGAAAAAAGTAGCTATAATTTTTATCGTGTTAATATTAATTGTGGCATTGCCAATGATATATTTTTGGCCGA
CGATAAAAGTATTAACGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MSAGESSNSKRNLGDYYDVKYSQGMLGMKRKVSISRMIKWRIKRGRHLHERYSIALAMMMRVARQFESMQASFPFNLVTD
SGFSGEDLVSDLLGFYRVFSIPSPFEILRPVSKEEALKRWDYYGPIGSYKNENFLSLLFPDPEKFRNSKPRLGYLPSFMQ
TVIPYNNFKSGNVGIASQDGVEVDTHFLG

Sequences:

>Translated_189_residues
MSAGESSNSKRNLGDYYDVKYSQGMLGMKRKVSISRMIKWRIKRGRHLHERYSIALAMMMRVARQFESMQASFPFNLVTD
SGFSGEDLVSDLLGFYRVFSIPSPFEILRPVSKEEALKRWDYYGPIGSYKNENFLSLLFPDPEKFRNSKPRLGYLPSFMQ
TVIPYNNFKSGNVGIASQDGVEVDTHFLG
>Mature_188_residues
SAGESSNSKRNLGDYYDVKYSQGMLGMKRKVSISRMIKWRIKRGRHLHERYSIALAMMMRVARQFESMQASFPFNLVTDS
GFSGEDLVSDLLGFYRVFSIPSPFEILRPVSKEEALKRWDYYGPIGSYKNENFLSLLFPDPEKFRNSKPRLGYLPSFMQT
VIPYNNFKSGNVGIASQDGVEVDTHFLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21710; Mature: 21579

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAGESSNSKRNLGDYYDVKYSQGMLGMKRKVSISRMIKWRIKRGRHLHERYSIALAMMM
CCCCCCCCCCCCCCCHHCCHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
RVARQFESMQASFPFNLVTDSGFSGEDLVSDLLGFYRVFSIPSPFEILRPVSKEEALKRW
HHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHH
DYYGPIGSYKNENFLSLLFPDPEKFRNSKPRLGYLPSFMQTVIPYNNFKSGNVGIASQDG
HCCCCCCCCCCCCEEEEECCCHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCC
VEVDTHFLG
CCCCCCCCC
>Mature Secondary Structure 
SAGESSNSKRNLGDYYDVKYSQGMLGMKRKVSISRMIKWRIKRGRHLHERYSIALAMMM
CCCCCCCCCCCCCCHHCCHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
RVARQFESMQASFPFNLVTDSGFSGEDLVSDLLGFYRVFSIPSPFEILRPVSKEEALKRW
HHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHH
DYYGPIGSYKNENFLSLLFPDPEKFRNSKPRLGYLPSFMQTVIPYNNFKSGNVGIASQDG
HCCCCCCCCCCCCEEEEECCCHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCC
VEVDTHFLG
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA