Click here to switch to the map view.

The map label for this gene is rhbF [H]

Identifier: 218928673

GI number: 218928673

Start: 1742758

End: 1744602

Strand: Direct

Name: rhbF [H]

Synonym: YPO1532

Alternate gene names: 218928673

Gene position: 1742758-1744602 (Clockwise)

Preceding gene: 218928672

Following gene: 218928680

Centisome position: 37.45

GC content: 46.94

Gene sequence:

>1845_bases
ATGATGATGGACTTATCAGCGCCTCTCTCCCCGCACCAGAGTTTGGAACTCCCCCATTTGCAGCCGGTACTGTGGCAAAA
AGTGAATCGCTTGCACTTGTGTAAAGCTATTTCTGAGTTTTCCCACGAGTGCTTGTTGGCTCCCCAACGGATGACAGATC
ACCCTGATAGTGAGGGATATGATTACTATCAGTTGGTGGCGGCGGCGGCGGACAAGCCGGCGAACTATGTTTTTCGTGCT
CGTCGCTTGGCACTGGATCACTGGTTGATTGACCCAGATTCGTTGCATAAAACCGTTAATGAAAAGAGCACAGATTTAGA
TTTACTGTTATTTATCATTGAGTTCAAGCGGCAATTGAGCATCAGTGAGCGAGTATTGCCGACCTATTTGGAGGAAATTA
CCAGCACGTTGTACAGCAGCGCATTTAAACACTGCCGCACAGGGATAAGTGCTACCGCCTTGGTGAATGCCAGCTTTCAG
ATAATAGAAAAGGAAATGATGGAGGGGCATCCTTCCTTTGTCGCTAATAATGGGCGTATTGGTTTTGATGCTCAGGACTT
TCAGAGATTTAGCCCGGAAGCCGCATCAGATGTGCATCTGGTCTGGCTCGCCGCCCATAAAAGTAAGGCGCATTTTGCCT
GCATTGAACAACTCGATTACGCGAAGTTGATGGAACAGGAACTCGGGGCGGAGGTACTGGCCGAATTTGAACAGCAATTA
ATAGCCAGAGACTGTAATCCTCAGGATTATGTGCTGATGCCGGTGCATCCGTGGCAGTGGCAGAATAAACTGACTTCGAT
ATTCGCGGCTGATATTGCTAATCAAAGGTTGGTATTTTTGGGGCAGGGCAAAGATGCTTATCAGGCACAGCAATCTATTC
GTACTTTCTTTAATCGCAGCCACCCGCAGCGATATTACGTAAAAATGGCGTTATCGATCCTGAATATGGGGTTTATGCGC
GGTTTATCACCCTACTATATGGCAACGACACCAGGAATTAACGAATGGCTGTTTGACTTGGTTGAAGGCGATGAAATATT
GCAAGCGTATGATTTCAAGATTTTGCGTGAAGTGGCCAGTATTGGTTTTCGCAATAGCTATTATGAGCAGGCGATCACCG
GGGATTCAGCATATAAAAAGATGGCCGCTGCACTGTGGCGGGAGAATCCGCTGCAATTAATTCAACCCGGTCAGCAACTG
ATGACGATGGCCGCCTTGTTACATTTGGATCAAGAAGGGAAAGCGCTACTGCCTGCGTTGATTGATGCATCCGGGTTATC
CACTCAGCAATGGCTGGAACGTTATTTGCGTAGCTATTTGTCACCGCTATTACATTGTTTATATGTTTACGATTTGATGT
TTATGCCCCACGGTGAAAATATCATTTTGGTTCTACAGAATGCCGTGCCGCAACATATTTTCATGAAAGATCTGGCGGAA
GAAATTTTGGTGCTGAACACTGAGGCTGATTTGCCGGAGAAAGCCCGGCGCATCATCGTGGATATGCCCGATGAGATGAA
AACCCTGACGATCCTCAGTGATGTGTTCGACGGTGTATTCCGCTATTTAGCCGCAGTCTTGGATCAACAAGGGGATTATC
CTGAGCGCTATTTCTGGGCGGATGTTGCGGCCTGTATCCGCCAGTACCAGCAGCAGTATCCTGAATTAGCCGCTAAATTT
GCGAGCTATCCGTTGTTTACACCCAAAATTAAACGCTGTTGTTTGAACCGCTTACAGCTCAACAATAACCAGCACATGCT
GGATTTAGCTGACCCTGTGCAAAGTTTTCAGTTTGCTGATGATTTGATCAATCCGTTGGTAGAATTCGAGGTATCAGCGG
GTTAG

Upstream 100 bases:

>100_bases
GTTTTGTCTATCAACAGCAACTGACATTACCCCATAAAACCGCTTGGTTGGCGTTTTGCACCCGGGAACAATATCGCCTT
GCCTTACAAAAGGAGCATCA

Downstream 100 bases:

>100_bases
CGCTTAATAAATTAGTCGGTCGTTAATAAACCAATAGACCGTTATAAGCAGTCGACCGTTATAAACCAATAGACCGGCAC
CGTTGAGGAGCCTTTCAGGG

Product: putative siderophore biosynthetic enzyme

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 614; Mature: 614

Protein sequence:

>614_residues
MMMDLSAPLSPHQSLELPHLQPVLWQKVNRLHLCKAISEFSHECLLAPQRMTDHPDSEGYDYYQLVAAAADKPANYVFRA
RRLALDHWLIDPDSLHKTVNEKSTDLDLLLFIIEFKRQLSISERVLPTYLEEITSTLYSSAFKHCRTGISATALVNASFQ
IIEKEMMEGHPSFVANNGRIGFDAQDFQRFSPEAASDVHLVWLAAHKSKAHFACIEQLDYAKLMEQELGAEVLAEFEQQL
IARDCNPQDYVLMPVHPWQWQNKLTSIFAADIANQRLVFLGQGKDAYQAQQSIRTFFNRSHPQRYYVKMALSILNMGFMR
GLSPYYMATTPGINEWLFDLVEGDEILQAYDFKILREVASIGFRNSYYEQAITGDSAYKKMAAALWRENPLQLIQPGQQL
MTMAALLHLDQEGKALLPALIDASGLSTQQWLERYLRSYLSPLLHCLYVYDLMFMPHGENIILVLQNAVPQHIFMKDLAE
EILVLNTEADLPEKARRIIVDMPDEMKTLTILSDVFDGVFRYLAAVLDQQGDYPERYFWADVAACIRQYQQQYPELAAKF
ASYPLFTPKIKRCCLNRLQLNNNQHMLDLADPVQSFQFADDLINPLVEFEVSAG

Sequences:

>Translated_614_residues
MMMDLSAPLSPHQSLELPHLQPVLWQKVNRLHLCKAISEFSHECLLAPQRMTDHPDSEGYDYYQLVAAAADKPANYVFRA
RRLALDHWLIDPDSLHKTVNEKSTDLDLLLFIIEFKRQLSISERVLPTYLEEITSTLYSSAFKHCRTGISATALVNASFQ
IIEKEMMEGHPSFVANNGRIGFDAQDFQRFSPEAASDVHLVWLAAHKSKAHFACIEQLDYAKLMEQELGAEVLAEFEQQL
IARDCNPQDYVLMPVHPWQWQNKLTSIFAADIANQRLVFLGQGKDAYQAQQSIRTFFNRSHPQRYYVKMALSILNMGFMR
GLSPYYMATTPGINEWLFDLVEGDEILQAYDFKILREVASIGFRNSYYEQAITGDSAYKKMAAALWRENPLQLIQPGQQL
MTMAALLHLDQEGKALLPALIDASGLSTQQWLERYLRSYLSPLLHCLYVYDLMFMPHGENIILVLQNAVPQHIFMKDLAE
EILVLNTEADLPEKARRIIVDMPDEMKTLTILSDVFDGVFRYLAAVLDQQGDYPERYFWADVAACIRQYQQQYPELAAKF
ASYPLFTPKIKRCCLNRLQLNNNQHMLDLADPVQSFQFADDLINPLVEFEVSAG
>Mature_614_residues
MMMDLSAPLSPHQSLELPHLQPVLWQKVNRLHLCKAISEFSHECLLAPQRMTDHPDSEGYDYYQLVAAAADKPANYVFRA
RRLALDHWLIDPDSLHKTVNEKSTDLDLLLFIIEFKRQLSISERVLPTYLEEITSTLYSSAFKHCRTGISATALVNASFQ
IIEKEMMEGHPSFVANNGRIGFDAQDFQRFSPEAASDVHLVWLAAHKSKAHFACIEQLDYAKLMEQELGAEVLAEFEQQL
IARDCNPQDYVLMPVHPWQWQNKLTSIFAADIANQRLVFLGQGKDAYQAQQSIRTFFNRSHPQRYYVKMALSILNMGFMR
GLSPYYMATTPGINEWLFDLVEGDEILQAYDFKILREVASIGFRNSYYEQAITGDSAYKKMAAALWRENPLQLIQPGQQL
MTMAALLHLDQEGKALLPALIDASGLSTQQWLERYLRSYLSPLLHCLYVYDLMFMPHGENIILVLQNAVPQHIFMKDLAE
EILVLNTEADLPEKARRIIVDMPDEMKTLTILSDVFDGVFRYLAAVLDQQGDYPERYFWADVAACIRQYQQQYPELAAKF
ASYPLFTPKIKRCCLNRLQLNNNQHMLDLADPVQSFQFADDLINPLVEFEVSAG

Specific function: Unknown

COG id: COG4264

COG function: function code Q; Siderophore synthetase component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iucC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007310
- InterPro:   IPR022770 [H]

Pfam domain/function: PF06276 FhuF; PF04183 IucA_IucC [H]

EC number: NA

Molecular weight: Translated: 70416; Mature: 70416

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMMDLSAPLSPHQSLELPHLQPVLWQKVNRLHLCKAISEFSHECLLAPQRMTDHPDSEGY
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHCCCCCCCCC
DYYQLVAAAADKPANYVFRARRLALDHWLIDPDSLHKTVNEKSTDLDLLLFIIEFKRQLS
HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
ISERVLPTYLEEITSTLYSSAFKHCRTGISATALVNASFQIIEKEMMEGHPSFVANNGRI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCC
GFDAQDFQRFSPEAASDVHLVWLAAHKSKAHFACIEQLDYAKLMEQELGAEVLAEFEQQL
CCCHHHHHHCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IARDCNPQDYVLMPVHPWQWQNKLTSIFAADIANQRLVFLGQGKDAYQAQQSIRTFFNRS
HHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCC
HPQRYYVKMALSILNMGFMRGLSPYYMATTPGINEWLFDLVEGDEILQAYDFKILREVAS
CCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH
IGFRNSYYEQAITGDSAYKKMAAALWRENPLQLIQPGQQLMTMAALLHLDQEGKALLPAL
CCCCHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHCCCCCCHHHHHH
IDASGLSTQQWLERYLRSYLSPLLHCLYVYDLMFMPHGENIILVLQNAVPQHIFMKDLAE
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHH
EILVLNTEADLPEKARRIIVDMPDEMKTLTILSDVFDGVFRYLAAVLDQQGDYPERYFWA
HHEEECCCCCCCHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
DVAACIRQYQQQYPELAAKFASYPLFTPKIKRCCLNRLQLNNNQHMLDLADPVQSFQFAD
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHH
DLINPLVEFEVSAG
HHHHHHHHHCCCCC
>Mature Secondary Structure
MMMDLSAPLSPHQSLELPHLQPVLWQKVNRLHLCKAISEFSHECLLAPQRMTDHPDSEGY
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHCCCCCCCCC
DYYQLVAAAADKPANYVFRARRLALDHWLIDPDSLHKTVNEKSTDLDLLLFIIEFKRQLS
HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
ISERVLPTYLEEITSTLYSSAFKHCRTGISATALVNASFQIIEKEMMEGHPSFVANNGRI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCC
GFDAQDFQRFSPEAASDVHLVWLAAHKSKAHFACIEQLDYAKLMEQELGAEVLAEFEQQL
CCCHHHHHHCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IARDCNPQDYVLMPVHPWQWQNKLTSIFAADIANQRLVFLGQGKDAYQAQQSIRTFFNRS
HHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCC
HPQRYYVKMALSILNMGFMRGLSPYYMATTPGINEWLFDLVEGDEILQAYDFKILREVAS
CCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH
IGFRNSYYEQAITGDSAYKKMAAALWRENPLQLIQPGQQLMTMAALLHLDQEGKALLPAL
CCCCHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHCCCCCCHHHHHH
IDASGLSTQQWLERYLRSYLSPLLHCLYVYDLMFMPHGENIILVLQNAVPQHIFMKDLAE
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHH
EILVLNTEADLPEKARRIIVDMPDEMKTLTILSDVFDGVFRYLAAVLDQQGDYPERYFWA
HHEEECCCCCCCHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
DVAACIRQYQQQYPELAAKFASYPLFTPKIKRCCLNRLQLNNNQHMLDLADPVQSFQFAD
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHH
DLINPLVEFEVSAG
HHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11274118; 11481432 [H]