Definition Yersinia pestis CO92 chromosome, complete genome.
Accession NC_003143
Length 4,653,728

Click here to switch to the map view.

The map label for this gene is 218928628

Identifier: 218928628

GI number: 218928628

Start: 1687596

End: 1688084

Strand: Direct

Name: 218928628

Synonym: YPO1487

Alternate gene names: NA

Gene position: 1687596-1688084 (Clockwise)

Preceding gene: 218928627

Following gene: 218928629

Centisome position: 36.26

GC content: 55.01

Gene sequence:

>489_bases
TTGTTGCTCAGTGGCTGCGGGCTGACGCAAGCCGTGACCGATAGCACCGTGTCGGCCACAAAATCACTGTTTTATAAGCA
GATAAAGGTGCTGCATCTGGACTTTACCGCCCGTGAAGCCCTGAATACCGATGCGCACGAGGCGAACTCGTCATCGGAGC
CGGTAATGGTGCGGGTTTATCAGTTACGTGATGATAAAACCTTCCTCAAAACGGTGTATCAACAACTGGCAAGCGACGGG
GAGGCGGCGCTTAAAGATGACCTGCTGGCCAGCCGCAGTGTGGTGGTGAAACCGGGCGGGGCGGTAACACTGGATATGCC
GATGGAAAAAGAGACCCAGTTTGTGGCAGTGGTGGCGCTGTTCCGTCATCCGGATATGGCCAAAGACCACTGGCGTCTGA
TACTCACGCTGGACGACCTGCATCCCGATAAGCCCCGTACCCTTGAGTTGGGTAATAACAGCCTGACCCTGCGGACGGAG
AAAAAATAA

Upstream 100 bases:

>100_bases
AACCGACGTGTTAACTACCGTTTGGAAAAATAAAACCTGTACTTCGAAACATAAAAGCTGGGCCGCCTGGAAAAATAAAA
TCTGCATCCCCGCACTGGTC

Downstream 100 bases:

>100_bases
TGCCGGATACCTCCTCGCCGTCACTGTATGAGCAATTGCTGGGCAATTTCACCGGCGGGCTTGACCTGCATCAGGTCAGT
GACGAAAACCAGGTCATTCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MLLSGCGLTQAVTDSTVSATKSLFYKQIKVLHLDFTAREALNTDAHEANSSSEPVMVRVYQLRDDKTFLKTVYQQLASDG
EAALKDDLLASRSVVVKPGGAVTLDMPMEKETQFVAVVALFRHPDMAKDHWRLILTLDDLHPDKPRTLELGNNSLTLRTE
KK

Sequences:

>Translated_162_residues
MLLSGCGLTQAVTDSTVSATKSLFYKQIKVLHLDFTAREALNTDAHEANSSSEPVMVRVYQLRDDKTFLKTVYQQLASDG
EAALKDDLLASRSVVVKPGGAVTLDMPMEKETQFVAVVALFRHPDMAKDHWRLILTLDDLHPDKPRTLELGNNSLTLRTE
KK
>Mature_162_residues
MLLSGCGLTQAVTDSTVSATKSLFYKQIKVLHLDFTAREALNTDAHEANSSSEPVMVRVYQLRDDKTFLKTVYQQLASDG
EAALKDDLLASRSVVVKPGGAVTLDMPMEKETQFVAVVALFRHPDMAKDHWRLILTLDDLHPDKPRTLELGNNSLTLRTE
KK

Specific function: Unknown

COG id: COG3521

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18042; Mature: 18042

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLSGCGLTQAVTDSTVSATKSLFYKQIKVLHLDFTAREALNTDAHEANSSSEPVMVRVY
CEECCCCCCHHHCCHHHHHHHHHHHHHHEEEEECCHHHHHCCCCCCCCCCCCCCEEEEEE
QLRDDKTFLKTVYQQLASDGEAALKDDLLASRSVVVKPGGAVTLDMPMEKETQFVAVVAL
EECCCHHHHHHHHHHHHCCCCHHHHHHHHHCCEEEECCCCEEEEECCCCCCHHHHEEHHH
FRHPDMAKDHWRLILTLDDLHPDKPRTLELGNNSLTLRTEKK
HHCCCCCCCCEEEEEEEECCCCCCCCEEEECCCEEEEEECCC
>Mature Secondary Structure
MLLSGCGLTQAVTDSTVSATKSLFYKQIKVLHLDFTAREALNTDAHEANSSSEPVMVRVY
CEECCCCCCHHHCCHHHHHHHHHHHHHHEEEEECCHHHHHCCCCCCCCCCCCCCEEEEEE
QLRDDKTFLKTVYQQLASDGEAALKDDLLASRSVVVKPGGAVTLDMPMEKETQFVAVVAL
EECCCHHHHHHHHHHHHCCCCHHHHHHHHHCCEEEECCCCEEEEECCCCCCHHHHEEHHH
FRHPDMAKDHWRLILTLDDLHPDKPRTLELGNNSLTLRTEKK
HHCCCCCCCCEEEEEEEECCCCCCCCEEEECCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA