| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218928619
Identifier: 218928619
GI number: 218928619
Start: 1671662
End: 1673845
Strand: Direct
Name: 218928619
Synonym: YPO1476
Alternate gene names: NA
Gene position: 1671662-1673845 (Clockwise)
Preceding gene: 218928618
Following gene: 218928620
Centisome position: 35.92
GC content: 44.37
Gene sequence:
>2184_bases ATGATAATCAGCCCTCCTTTCTTGCGCGCAAAAATGTCGTCACAACCCGATGAAGAATGGGTAAGCAGCATGATGCCGGC AGATCCACAGCGTGGTTACCCTATCAGCAACAGCCAGGCATGGCACGGTGGCATCCATATCAAACATACCGACCACACAG GCGTGCCGGAGCAAGTGCGTGCCATTGCCGACGGCACTGTTTTTTCAGTACGTCAACCGAGTCTGCAGAAGCGAGACTTG CTGCCGTTGAACTACAATGGCCCCACCGATTGCGGTTATGTATTGATTAAGCATGAAACAGAAATTGGCAGCGATGAGGG TGGCAAGGTCGCCTACTGGTCGTTGTATATGCACATGAAAAGCATTGGCAGCACAGTTTCACCAGGTTCAGTTGTCTACC GAAAAGATCCGTTAGGAACCGTCGGCATGGTGGATGGTCAGAACGCCATTCATTTTCAAATATTCTGCGATGACGCCAAT ATCAAAAAGCTGACGGGTCGTGAAACGCCGGAACTTGATTTAGCAAATAATGGCCGGACCGATGTCGTCTATGGAGACAT TCACTTTTATTTGCCTGCCGGAACGCCTGTTTATGACTCGATGCCTAAAGACAACACGCCGGTGTCTTTAATGGCAAATG GTCCGGTGCCCCGCACAAAGTCTGATTTATTTGTGACGATGCGTTTTCATCAGGGAAGTTGCACGATGACAACCTTGCAT AAAGCCGTTTTTAGCTCAATGTATCTGGAAGTGGGTGAGCCCCTAACGGATGCCGATGGCGCAGATTATGAATACAACCT TTACAGCAAAGCTTTAACTTTGTACCCGAACAGTCCAAGTGCAGGATATGAACTGCTGCGGTTTGGTCGCGTTATTAATA CAGATAATGAAACCTTATCACCTGCCGGTGCACCTTTGTGGCGAACGATTAATTATCCGGAGGGGAAAGGGGTAGTTAAC CTTGCGGCAGCGTCAGTAAAAGTATTCAGTGATGCTGATTTCCCCCACTGGATGGGATGGCAACTGGTTGATGATGATAC GGATACGAATAGCCAGTGTAATTCACCCACAATTACTTTGCGGTGTAAGACTGGGGTGGACTTAAGCGGGATGATTTGTC ATTTCCCGCTGGAATGGGATAAAACGACAGTAGATAACCGCTTCCAGTGGCTGGCGAAAGAAAATGATGTTCTGCCGGAG CCTATGGAGCTTTGTGATTTAGGGCCCCTGACCGATCACGCAAAGGCGCTTTGTTTAGCTGAGAATCCACTACCTTCGGG TAGAGTATGGCATTTTGAACCAACGAGGTTTATTGAGCATTTTAGGAAGTGTGGGTGGTTGAGTAATAAGGAAATGAAAC AATTAATCCCAACTAAAGCACTCTCCAACGGACAATGGCAAACCATACCTGACCGATATGGTGATACATCTGTGCTAGCT CGACACTATTCCAGAATAAATAAGGTATTACGAAAATATTTAATCAACACACCATTCCGAATGGCCTGTTTTTTTGGTAA TGCAATACAGGAGACTGCTTGGCTTACCACTACGCATGAAGGTTATGTGTATACTGAAAGAAATCAACGAACACGCGCAA TAATCAGACATTACAATATTTGGTATTACCCGTGGTATGGGCGCGGTTTTTTGCAATTAACTAGCCCTGGGAATTACTAT AAATATTTTAAATACCGTGGGTATACTTATGATGAAACAGTTAAAATAAAATTGGAAAATGAATATAACCGTTTATATAG GAATGGTTCCATAAGATATTCTGAAAATCATCTTGATGACACTAGCAATCCTGAATTATCCGCAGAAATTCTCAACTGGA GAAATAGCCTTGAAACTGGAGATTATGAACCAGCCGATAGTGCAGGATTTTATTGGTGCACTACACAGATGGCAAAATAC GCAGACCCAGAACATATTCTTGAACGGCAAGTGTCAGCGAACCATATTTACTATCGAAGCCCTTCATTTTGGCAAGCCAG TGCAACTGTTAATTTACCGGGAGCAAGGCAGCGAACTAATTATTCAGGGTTAAATGGTTTTATCGAGAGATGCTACGTTT ACGGGAGCGCCCTTGCGGTTCTAACAGAATTGAAATTTCCAGACTCGCAAGGAACATATTCTTTAGAAAAACCTGAAGAA AATAATTTAAGGAGAACATTATGA
Upstream 100 bases:
>100_bases AGTGGATAAGGCGAAATTGGAGACAGTAGTGCCAACATTAGCCGTTAAAGCTAAACCACCCACTCAGAAGTATCCATTTT CTTAATTAAAGGATTAATCA
Downstream 100 bases:
>100_bases ATATAAAAAAATAATTTCGGCAATATTAATAATTTGTTTTTCCGCAAAGGCAGAGATACAACCAAAACCAGAAGAAAATA TAGATTCAAAAAACATAACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 727; Mature: 727
Protein sequence:
>727_residues MIISPPFLRAKMSSQPDEEWVSSMMPADPQRGYPISNSQAWHGGIHIKHTDHTGVPEQVRAIADGTVFSVRQPSLQKRDL LPLNYNGPTDCGYVLIKHETEIGSDEGGKVAYWSLYMHMKSIGSTVSPGSVVYRKDPLGTVGMVDGQNAIHFQIFCDDAN IKKLTGRETPELDLANNGRTDVVYGDIHFYLPAGTPVYDSMPKDNTPVSLMANGPVPRTKSDLFVTMRFHQGSCTMTTLH KAVFSSMYLEVGEPLTDADGADYEYNLYSKALTLYPNSPSAGYELLRFGRVINTDNETLSPAGAPLWRTINYPEGKGVVN LAAASVKVFSDADFPHWMGWQLVDDDTDTNSQCNSPTITLRCKTGVDLSGMICHFPLEWDKTTVDNRFQWLAKENDVLPE PMELCDLGPLTDHAKALCLAENPLPSGRVWHFEPTRFIEHFRKCGWLSNKEMKQLIPTKALSNGQWQTIPDRYGDTSVLA RHYSRINKVLRKYLINTPFRMACFFGNAIQETAWLTTTHEGYVYTERNQRTRAIIRHYNIWYYPWYGRGFLQLTSPGNYY KYFKYRGYTYDETVKIKLENEYNRLYRNGSIRYSENHLDDTSNPELSAEILNWRNSLETGDYEPADSAGFYWCTTQMAKY ADPEHILERQVSANHIYYRSPSFWQASATVNLPGARQRTNYSGLNGFIERCYVYGSALAVLTELKFPDSQGTYSLEKPEE NNLRRTL
Sequences:
>Translated_727_residues MIISPPFLRAKMSSQPDEEWVSSMMPADPQRGYPISNSQAWHGGIHIKHTDHTGVPEQVRAIADGTVFSVRQPSLQKRDL LPLNYNGPTDCGYVLIKHETEIGSDEGGKVAYWSLYMHMKSIGSTVSPGSVVYRKDPLGTVGMVDGQNAIHFQIFCDDAN IKKLTGRETPELDLANNGRTDVVYGDIHFYLPAGTPVYDSMPKDNTPVSLMANGPVPRTKSDLFVTMRFHQGSCTMTTLH KAVFSSMYLEVGEPLTDADGADYEYNLYSKALTLYPNSPSAGYELLRFGRVINTDNETLSPAGAPLWRTINYPEGKGVVN LAAASVKVFSDADFPHWMGWQLVDDDTDTNSQCNSPTITLRCKTGVDLSGMICHFPLEWDKTTVDNRFQWLAKENDVLPE PMELCDLGPLTDHAKALCLAENPLPSGRVWHFEPTRFIEHFRKCGWLSNKEMKQLIPTKALSNGQWQTIPDRYGDTSVLA RHYSRINKVLRKYLINTPFRMACFFGNAIQETAWLTTTHEGYVYTERNQRTRAIIRHYNIWYYPWYGRGFLQLTSPGNYY KYFKYRGYTYDETVKIKLENEYNRLYRNGSIRYSENHLDDTSNPELSAEILNWRNSLETGDYEPADSAGFYWCTTQMAKY ADPEHILERQVSANHIYYRSPSFWQASATVNLPGARQRTNYSGLNGFIERCYVYGSALAVLTELKFPDSQGTYSLEKPEE NNLRRTL >Mature_727_residues MIISPPFLRAKMSSQPDEEWVSSMMPADPQRGYPISNSQAWHGGIHIKHTDHTGVPEQVRAIADGTVFSVRQPSLQKRDL LPLNYNGPTDCGYVLIKHETEIGSDEGGKVAYWSLYMHMKSIGSTVSPGSVVYRKDPLGTVGMVDGQNAIHFQIFCDDAN IKKLTGRETPELDLANNGRTDVVYGDIHFYLPAGTPVYDSMPKDNTPVSLMANGPVPRTKSDLFVTMRFHQGSCTMTTLH KAVFSSMYLEVGEPLTDADGADYEYNLYSKALTLYPNSPSAGYELLRFGRVINTDNETLSPAGAPLWRTINYPEGKGVVN LAAASVKVFSDADFPHWMGWQLVDDDTDTNSQCNSPTITLRCKTGVDLSGMICHFPLEWDKTTVDNRFQWLAKENDVLPE PMELCDLGPLTDHAKALCLAENPLPSGRVWHFEPTRFIEHFRKCGWLSNKEMKQLIPTKALSNGQWQTIPDRYGDTSVLA RHYSRINKVLRKYLINTPFRMACFFGNAIQETAWLTTTHEGYVYTERNQRTRAIIRHYNIWYYPWYGRGFLQLTSPGNYY KYFKYRGYTYDETVKIKLENEYNRLYRNGSIRYSENHLDDTSNPELSAEILNWRNSLETGDYEPADSAGFYWCTTQMAKY ADPEHILERQVSANHIYYRSPSFWQASATVNLPGARQRTNYSGLNGFIERCYVYGSALAVLTELKFPDSQGTYSLEKPEE NNLRRTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 82712; Mature: 82712
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIISPPFLRAKMSSQPDEEWVSSMMPADPQRGYPISNSQAWHGGIHIKHTDHTGVPEQVR CCCCCCHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEECCEEEEECCCCCCHHHHH AIADGTVFSVRQPSLQKRDLLPLNYNGPTDCGYVLIKHETEIGSDEGGKVAYWSLYMHMK HHHCCCEEEECCCCCHHCCCEEECCCCCCCCCEEEEEECCCCCCCCCCCEEEEEHHHHHH SIGSTVSPGSVVYRKDPLGTVGMVDGQNAIHFQIFCDDANIKKLTGRETPELDLANNGRT HHCCCCCCCEEEEECCCCCEEEEECCCCEEEEEEEECCCCCEECCCCCCCCEEECCCCCC DVVYGDIHFYLPAGTPVYDSMPKDNTPVSLMANGPVPRTKSDLFVTMRFHQGSCTMTTLH EEEEEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEECCCCHHHHHH KAVFSSMYLEVGEPLTDADGADYEYNLYSKALTLYPNSPSAGYELLRFGRVINTDNETLS HHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEEEECCCCCHHHHHHHHCCEECCCCCCCC PAGAPLWRTINYPEGKGVVNLAAASVKVFSDADFPHWMGWQLVDDDTDTNSQCNSPTITL CCCCCEEEEECCCCCCCEEEEEEEEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCEEEE RCKTGVDLSGMICHFPLEWDKTTVDNRFQWLAKENDVLPEPMELCDLGPLTDHAKALCLA EECCCCCCCCEEEEECCCCCCCCCCCHHHHHHCCCCCCCCCHHHHCCCCCCCCCEEEEEE ENPLPSGRVWHFEPTRFIEHFRKCGWLSNKEMKQLIPTKALSNGQWQTIPDRYGDTSVLA CCCCCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHCCHHHCCCCCCEECCCCCCCHHHHH RHYSRINKVLRKYLINTPFRMACFFGNAIQETAWLTTTHEGYVYTERNQRTRAIIRHYNI HHHHHHHHHHHHHHHCCCCEEEEHHCCHHHHCEEEEEECCCEEEECCCCHHHHHHEECEE WYYPWYGRGFLQLTSPGNYYKYFKYRGYTYDETVKIKLENEYNRLYRNGSIRYSENHLDD EEEEEECCEEEEECCCCCEEEEEEECCCEECCEEEEEECCCHHHHHCCCCEEECCCCCCC TSNPELSAEILNWRNSLETGDYEPADSAGFYWCTTQMAKYADPEHILERQVSANHIYYRS CCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHCCCHHHHHHHHHCCCEEEECC PSFWQASATVNLPGARQRTNYSGLNGFIERCYVYGSALAVLTELKFPDSQGTYSLEKPEE CCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCC NNLRRTL CCCCCCC >Mature Secondary Structure MIISPPFLRAKMSSQPDEEWVSSMMPADPQRGYPISNSQAWHGGIHIKHTDHTGVPEQVR CCCCCCHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEECCEEEEECCCCCCHHHHH AIADGTVFSVRQPSLQKRDLLPLNYNGPTDCGYVLIKHETEIGSDEGGKVAYWSLYMHMK HHHCCCEEEECCCCCHHCCCEEECCCCCCCCCEEEEEECCCCCCCCCCCEEEEEHHHHHH SIGSTVSPGSVVYRKDPLGTVGMVDGQNAIHFQIFCDDANIKKLTGRETPELDLANNGRT HHCCCCCCCEEEEECCCCCEEEEECCCCEEEEEEEECCCCCEECCCCCCCCEEECCCCCC DVVYGDIHFYLPAGTPVYDSMPKDNTPVSLMANGPVPRTKSDLFVTMRFHQGSCTMTTLH EEEEEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEECCCCHHHHHH KAVFSSMYLEVGEPLTDADGADYEYNLYSKALTLYPNSPSAGYELLRFGRVINTDNETLS HHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEEEECCCCCHHHHHHHHCCEECCCCCCCC PAGAPLWRTINYPEGKGVVNLAAASVKVFSDADFPHWMGWQLVDDDTDTNSQCNSPTITL CCCCCEEEEECCCCCCCEEEEEEEEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCEEEE RCKTGVDLSGMICHFPLEWDKTTVDNRFQWLAKENDVLPEPMELCDLGPLTDHAKALCLA EECCCCCCCCEEEEECCCCCCCCCCCHHHHHHCCCCCCCCCHHHHCCCCCCCCCEEEEEE ENPLPSGRVWHFEPTRFIEHFRKCGWLSNKEMKQLIPTKALSNGQWQTIPDRYGDTSVLA CCCCCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHCCHHHCCCCCCEECCCCCCCHHHHH RHYSRINKVLRKYLINTPFRMACFFGNAIQETAWLTTTHEGYVYTERNQRTRAIIRHYNI HHHHHHHHHHHHHHHCCCCEEEEHHCCHHHHCEEEEEECCCEEEECCCCHHHHHHEECEE WYYPWYGRGFLQLTSPGNYYKYFKYRGYTYDETVKIKLENEYNRLYRNGSIRYSENHLDD EEEEEECCEEEEECCCCCEEEEEEECCCEECCEEEEEECCCHHHHHCCCCEEECCCCCCC TSNPELSAEILNWRNSLETGDYEPADSAGFYWCTTQMAKYADPEHILERQVSANHIYYRS CCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHCCCHHHHHHHHHCCCEEEECC PSFWQASATVNLPGARQRTNYSGLNGFIERCYVYGSALAVLTELKFPDSQGTYSLEKPEE CCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCC NNLRRTL CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA