| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218928609
Identifier: 218928609
GI number: 218928609
Start: 1656937
End: 1658487
Strand: Direct
Name: 218928609
Synonym: YPO1466
Alternate gene names: NA
Gene position: 1656937-1658487 (Clockwise)
Preceding gene: 218928608
Following gene: 218928610
Centisome position: 35.6
GC content: 55.13
Gene sequence:
>1551_bases ATGCTGATGTCTGTACAGGAAAACCGTGCGCAGGGTACTGCGACGACCGTATTAAAGAATAGCCCTGCGGCACAAGGGGT TTACGCCGCCTTGTTTGAAAAAATCAACCTGAGCCCGGTCTCCTCACTGGCCGGTATCGAGGCGTTCCAGAACAACGATG CGCTGGCGGAAGCCACCACCGATGAGCGCGTTACCGCCGCCGTCAGTGTCTTTTTAGACCTGCTGAAGCAGTCGGCGAAG AAAGTAGAAAAACTGGATAAAACCCTGCTGGACGGCCATATTGCCGCACTGGATGACCAAATCAGCCGCCAGTTGGACGC GGTAATGCACCACCCCGATTTCCAGCGGGTGGAATCGACCTGGCGTGGTGTGAAGTCGCTGATCGATCAGACCGATTTCC GCCAGAACGTGCGCATCGAGCTGCTGGATATCAGTAAAGATCATCTGGTGCAGGATTTTGAAGATGCCCCGGAAATCTCA CAAAGCGGTTTATACGCCCAGACCTATATTCAGGAATACGACACCCCCGGCGGCGAGCCGATTGCCGCGGCTATCTCCAA CTACGAGTTCGACCGCAGCCCGCAAGATATCGCCTTATTGCGCAATATCTCCAAAGTGGCGGCTGCAGCCCATATGCCGT TTATCGGCTCAGTGGGTCCGGCGTTCTTTGGTAAAGAGAACATGGAAGAAGTGGCGGCGATTAAAGATATCGGCAACTAC TTTGACCGCGCTGAATACATCAAATGGAAAGCTTTCCGCGACTCGGATGATTCCCGCTATATCGGCCTGACCATGCCGCG CGTGCTGGGGCGTTTGCCTTATGGGCCAGACACCGTGCCGGTGCGCAGCTTTAACTACGTAGAGCAGGTGAAAGGGCCGG ATCATGAGCGTTATCTGTGGACCAACGCTTCGTTTGCCTTTGCTGCCAACATGGTGAAAAGCTTCATTAAAAATGGCTGG TGTGTGCAGATCCGTGGCCCGCAGGCCGGTGGTGCGGTCACCAACTTACCGATCCACCTGTACGATCTGGGTACCGGTAA TCAGGTCAAAATTCCGTCAGAGGTGATGATCCCGGAAACCCGCGAGTTCGAGTTTGCCAATCTGGGCTTTATCCCGCTGT CGTACTACAAAAACCGCGATTACTCGTGCTTCTTCTCGGCCAACTCGGCGCAGAAACCGGCGCTGTATGACACCGCGGAT GCCACGGCCAACAGCCGCATCAACGCCCGTCTGCCGTATATCTTCCTGCTGTCGCGCATTGCCCATTATCTGAAACTGAT CCAGCGCGAGAACATCGGCACCACCAAAGATCGCCGTCTGCTGGAGCTAGAGCTGAACAACTGGGTGCGCGGGCTGGTGA CGGAAATGACTGATCCGGGTGATGATTTGCAGGCGTCCCATCCCCTGCGTGATGCCAAAGTGACGGTCGAAGATATCGAA GACAACCCCGGCTTCTTCCGCGTCAAGCTGTATGCGGTACCGCATTTCCAGGTGGAAGGGATGGACGTCAATCTGTCATT GGTTTCCCAAATGCCGAAGGCTAAGGCATAA
Upstream 100 bases:
>100_bases TGCCTTGAGCGATGAACTGCGCGCTGAACTGGCGGCCCTGGCACCAAAAGAGGGTTAATCCCGGGATTGGCTGCTTGTCA TTAGAAAGAAGAAAAGGAAC
Downstream 100 bases:
>100_bases ACGGCGACACGATGAAGATTGAACGTCCTCTGTGGACTCGCGGAGTTTTGATTTCCCCGCAGCAATTTCAACAACAGGCC TCCTGGGAGGCCTGGACCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 516; Mature: 516
Protein sequence:
>516_residues MLMSVQENRAQGTATTVLKNSPAAQGVYAALFEKINLSPVSSLAGIEAFQNNDALAEATTDERVTAAVSVFLDLLKQSAK KVEKLDKTLLDGHIAALDDQISRQLDAVMHHPDFQRVESTWRGVKSLIDQTDFRQNVRIELLDISKDHLVQDFEDAPEIS QSGLYAQTYIQEYDTPGGEPIAAAISNYEFDRSPQDIALLRNISKVAAAAHMPFIGSVGPAFFGKENMEEVAAIKDIGNY FDRAEYIKWKAFRDSDDSRYIGLTMPRVLGRLPYGPDTVPVRSFNYVEQVKGPDHERYLWTNASFAFAANMVKSFIKNGW CVQIRGPQAGGAVTNLPIHLYDLGTGNQVKIPSEVMIPETREFEFANLGFIPLSYYKNRDYSCFFSANSAQKPALYDTAD ATANSRINARLPYIFLLSRIAHYLKLIQRENIGTTKDRRLLELELNNWVRGLVTEMTDPGDDLQASHPLRDAKVTVEDIE DNPGFFRVKLYAVPHFQVEGMDVNLSLVSQMPKAKA
Sequences:
>Translated_516_residues MLMSVQENRAQGTATTVLKNSPAAQGVYAALFEKINLSPVSSLAGIEAFQNNDALAEATTDERVTAAVSVFLDLLKQSAK KVEKLDKTLLDGHIAALDDQISRQLDAVMHHPDFQRVESTWRGVKSLIDQTDFRQNVRIELLDISKDHLVQDFEDAPEIS QSGLYAQTYIQEYDTPGGEPIAAAISNYEFDRSPQDIALLRNISKVAAAAHMPFIGSVGPAFFGKENMEEVAAIKDIGNY FDRAEYIKWKAFRDSDDSRYIGLTMPRVLGRLPYGPDTVPVRSFNYVEQVKGPDHERYLWTNASFAFAANMVKSFIKNGW CVQIRGPQAGGAVTNLPIHLYDLGTGNQVKIPSEVMIPETREFEFANLGFIPLSYYKNRDYSCFFSANSAQKPALYDTAD ATANSRINARLPYIFLLSRIAHYLKLIQRENIGTTKDRRLLELELNNWVRGLVTEMTDPGDDLQASHPLRDAKVTVEDIE DNPGFFRVKLYAVPHFQVEGMDVNLSLVSQMPKAKA >Mature_516_residues MLMSVQENRAQGTATTVLKNSPAAQGVYAALFEKINLSPVSSLAGIEAFQNNDALAEATTDERVTAAVSVFLDLLKQSAK KVEKLDKTLLDGHIAALDDQISRQLDAVMHHPDFQRVESTWRGVKSLIDQTDFRQNVRIELLDISKDHLVQDFEDAPEIS QSGLYAQTYIQEYDTPGGEPIAAAISNYEFDRSPQDIALLRNISKVAAAAHMPFIGSVGPAFFGKENMEEVAAIKDIGNY FDRAEYIKWKAFRDSDDSRYIGLTMPRVLGRLPYGPDTVPVRSFNYVEQVKGPDHERYLWTNASFAFAANMVKSFIKNGW CVQIRGPQAGGAVTNLPIHLYDLGTGNQVKIPSEVMIPETREFEFANLGFIPLSYYKNRDYSCFFSANSAQKPALYDTAD ATANSRINARLPYIFLLSRIAHYLKLIQRENIGTTKDRRLLELELNNWVRGLVTEMTDPGDDLQASHPLRDAKVTVEDIE DNPGFFRVKLYAVPHFQVEGMDVNLSLVSQMPKAKA
Specific function: Unknown
COG id: COG3517
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57731; Mature: 57731
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLMSVQENRAQGTATTVLKNSPAAQGVYAALFEKINLSPVSSLAGIEAFQNNDALAEATT CCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEECCC DERVTAAVSVFLDLLKQSAKKVEKLDKTLLDGHIAALDDQISRQLDAVMHHPDFQRVEST CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH WRGVKSLIDQTDFRQNVRIELLDISKDHLVQDFEDAPEISQSGLYAQTYIQEYDTPGGEP HHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHCCCCHHHCCCHHHHHHHHHCCCCCCH IAAAISNYEFDRSPQDIALLRNISKVAAAAHMPFIGSVGPAFFGKENMEEVAAIKDIGNY HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCHHHHHHHHHHHHH FDRAEYIKWKAFRDSDDSRYIGLTMPRVLGRLPYGPDTVPVRSFNYVEQVKGPDHERYLW HHHHHHEEEEEECCCCCCEEEEEEHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEE TNASFAFAANMVKSFIKNGWCVQIRGPQAGGAVTNLPIHLYDLGTGNQVKIPSEVMIPET ECCHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEECCEEEEECCCCCEEECCCCCCCCCC REFEFANLGFIPLSYYKNRDYSCFFSANSAQKPALYDTADATANSRINARLPYIFLLSRI CCCCEECCCCEEEHHHCCCCCEEEEECCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHH AHYLKLIQRENIGTTKDRRLLELELNNWVRGLVTEMTDPGDDLQASHPLRDAKVTVEDIE HHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECC DNPGFFRVKLYAVPHFQVEGMDVNLSLVSQMPKAKA CCCCEEEEEEEEECCEEEECCEECHHHHHCCCCCCC >Mature Secondary Structure MLMSVQENRAQGTATTVLKNSPAAQGVYAALFEKINLSPVSSLAGIEAFQNNDALAEATT CCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEECCC DERVTAAVSVFLDLLKQSAKKVEKLDKTLLDGHIAALDDQISRQLDAVMHHPDFQRVEST CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH WRGVKSLIDQTDFRQNVRIELLDISKDHLVQDFEDAPEISQSGLYAQTYIQEYDTPGGEP HHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHCCCCHHHCCCHHHHHHHHHCCCCCCH IAAAISNYEFDRSPQDIALLRNISKVAAAAHMPFIGSVGPAFFGKENMEEVAAIKDIGNY HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCHHHHHHHHHHHHH FDRAEYIKWKAFRDSDDSRYIGLTMPRVLGRLPYGPDTVPVRSFNYVEQVKGPDHERYLW HHHHHHEEEEEECCCCCCEEEEEEHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEE TNASFAFAANMVKSFIKNGWCVQIRGPQAGGAVTNLPIHLYDLGTGNQVKIPSEVMIPET ECCHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEECCEEEEECCCCCEEECCCCCCCCCC REFEFANLGFIPLSYYKNRDYSCFFSANSAQKPALYDTADATANSRINARLPYIFLLSRI CCCCEECCCCEEEHHHCCCCCEEEEECCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHH AHYLKLIQRENIGTTKDRRLLELELNNWVRGLVTEMTDPGDDLQASHPLRDAKVTVEDIE HHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECC DNPGFFRVKLYAVPHFQVEGMDVNLSLVSQMPKAKA CCCCEEEEEEEEECCEEEECCEECHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA