| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
Click here to switch to the map view.
The map label for this gene is 218928571
Identifier: 218928571
GI number: 218928571
Start: 1618277
End: 1618417
Strand: Direct
Name: 218928571
Synonym: YPO1423
Alternate gene names: NA
Gene position: 1618277-1618417 (Clockwise)
Preceding gene: 218928570
Following gene: 218928572
Centisome position: 34.77
GC content: 36.17
Gene sequence:
>141_bases TTGTCAGGGGAAGGGGGTTTCTATTTAATATCAATGCATTACCTTCATATGCACCAAATCAATGACTTAGCTAATTCTGT GGATGTAGCTCACAAATATGACATTGGCGTGAATTTTGCGCATTGCTTTTCTGTTTTTTAA
Upstream 100 bases:
>100_bases CTGGCAACAGGAAGCTAAAACTATCGCCGCTCAATTGCAAAAGATTAAGTAAGATCTTTTTCTAAATCAGTCTAATCCTC TTTCTCTGGTAATAATCATC
Downstream 100 bases:
>100_bases GGTCTATCACTTAACTGTGGTTGCACATAAAGTAGCCACTGTTTTCTTTCCACCAAACCAAAAAGTGAGGGAAACGAGGC ATGAAGAGACAGAAAAGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 46; Mature: 45
Protein sequence:
>46_residues MSGEGGFYLISMHYLHMHQINDLANSVDVAHKYDIGVNFAHCFSVF
Sequences:
>Translated_46_residues MSGEGGFYLISMHYLHMHQINDLANSVDVAHKYDIGVNFAHCFSVF >Mature_45_residues SGEGGFYLISMHYLHMHQINDLANSVDVAHKYDIGVNFAHCFSVF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5217; Mature: 5086
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 6.5 %Met (Translated Protein) 8.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGEGGFYLISMHYLHMHQINDLANSVDVAHKYDIGVNFAHCFSVF CCCCCCEEEEEEEEHHHHHHHHHHHHCCCCEECCCCCCHHHEEECC >Mature Secondary Structure SGEGGFYLISMHYLHMHQINDLANSVDVAHKYDIGVNFAHCFSVF CCCCCEEEEEEEEHHHHHHHHHHHHCCCCEECCCCCCHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA