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The map label for this gene is ybjX [H]

Identifier: 218928511

GI number: 218928511

Start: 1529865

End: 1530812

Strand: Reverse

Name: ybjX [H]

Synonym: YPO1363

Alternate gene names: 218928511

Gene position: 1530812-1529865 (Counterclockwise)

Preceding gene: 218928514

Following gene: 218928509

Centisome position: 32.89

GC content: 42.62

Gene sequence:

>948_bases
ATGCGAGTCATCAGTGATAGACAATTAAAATCTGACAATATCAATCATTGGGGGCTGATTATATTGTTATGCAAAGGCAG
TCCGATATTCAGTGATTCATGGCAAGAATGGAAGTTTCGGCTTAAATTTATCATCCGGGCGTTAATCAGCCCAAGATTAA
CATTTAACTTTCTGATCTTACTGTCAAAACAACCTTTCTTACACAGCCTTCTCCGCGCACAACCCGATTTACCGTGCAAA
TTACATCGCCCCTATCTGAGCCACACCTTCAATAACCGCCAGAAACTGGATGTCTTGCGCGATCACTTTCAGCTCATCAC
TCAATGTATGCCAAAAGCATTACATTACAACTATTTACATCGAACACCTTATAGGCTGGTAACATTAACCGGCAAAGGCG
GCGAAAAGTATTCCCTTTATTTGGGCATCATACCAAAGCTCAATAAAGAGGGCGAAATTACGCTGATGTTGGCCAATGAG
CAACAACAAACACTGGCATTGCTCACTTTCAGTTTATTTTATTATCAGCAGCAAAAAACATTATTTATTGGCGGCTTACA
GGGGGCTGATAATAAAACACCTCACCATGAAATTCAGGCCTGTACTAAAGCGTGCCATGGTTTATTCCCAAAACGTTTGG
CGCTAGAGGCGACCTGTTATCTGGCTGAATTAATGGGAATAGAAGAAATTATCGCGGTAGGGAACGCCACTCATATCTAT
CAAAATTGGCGTTATCGGGCCAAGAAAAAAAATAAATTACATGCCGATTACGATGGCTTTTGGCTCTCACTCGGTGGTAA
CCCAGACACTGAAGGGCATTTCAGATTACCCACCAAAATTGTCCGTAAACCTCTCACCGAGATTGCCAGCAAAAAGCGGG
CAGAATATCGTCGTCGCTATGTGCTACTGGAGCAATTAGAAGCGGGGTTAGCCGCACATTTTATGTGA

Upstream 100 bases:

>100_bases
CTATCGCACCACGGCACAAAATATTAGATTTATTGATATTTTGTTTAGCTCTCAACTGTTTCAATACCACTAGAAAAACA
GTAATTAGACGGATTTAATC

Downstream 100 bases:

>100_bases
GCAGCTTAATCGAATTACGTGAGCGATTTAAACGCTGCTTGCGGCGGCCCCGCAGAGGCGAGGCCCATGGACAGGCCGAG
TCACAAACTCAGTCACCCCA

Product: putative virulence factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MRVISDRQLKSDNINHWGLIILLCKGSPIFSDSWQEWKFRLKFIIRALISPRLTFNFLILLSKQPFLHSLLRAQPDLPCK
LHRPYLSHTFNNRQKLDVLRDHFQLITQCMPKALHYNYLHRTPYRLVTLTGKGGEKYSLYLGIIPKLNKEGEITLMLANE
QQQTLALLTFSLFYYQQQKTLFIGGLQGADNKTPHHEIQACTKACHGLFPKRLALEATCYLAELMGIEEIIAVGNATHIY
QNWRYRAKKKNKLHADYDGFWLSLGGNPDTEGHFRLPTKIVRKPLTEIASKKRAEYRRRYVLLEQLEAGLAAHFM

Sequences:

>Translated_315_residues
MRVISDRQLKSDNINHWGLIILLCKGSPIFSDSWQEWKFRLKFIIRALISPRLTFNFLILLSKQPFLHSLLRAQPDLPCK
LHRPYLSHTFNNRQKLDVLRDHFQLITQCMPKALHYNYLHRTPYRLVTLTGKGGEKYSLYLGIIPKLNKEGEITLMLANE
QQQTLALLTFSLFYYQQQKTLFIGGLQGADNKTPHHEIQACTKACHGLFPKRLALEATCYLAELMGIEEIIAVGNATHIY
QNWRYRAKKKNKLHADYDGFWLSLGGNPDTEGHFRLPTKIVRKPLTEIASKKRAEYRRRYVLLEQLEAGLAAHFM
>Mature_315_residues
MRVISDRQLKSDNINHWGLIILLCKGSPIFSDSWQEWKFRLKFIIRALISPRLTFNFLILLSKQPFLHSLLRAQPDLPCK
LHRPYLSHTFNNRQKLDVLRDHFQLITQCMPKALHYNYLHRTPYRLVTLTGKGGEKYSLYLGIIPKLNKEGEITLMLANE
QQQTLALLTFSLFYYQQQKTLFIGGLQGADNKTPHHEIQACTKACHGLFPKRLALEATCYLAELMGIEEIIAVGNATHIY
QNWRYRAKKKNKLHADYDGFWLSLGGNPDTEGHFRLPTKIVRKPLTEIASKKRAEYRRRYVLLEQLEAGLAAHFM

Specific function: Unknown

COG id: COG2990

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0461 [H]

Homologues:

Organism=Escherichia coli, GI1787103, Length=281, Percent_Identity=48.7544483985765, Blast_Score=277, Evalue=5e-76,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007488 [H]

Pfam domain/function: PF04393 DUF535 [H]

EC number: NA

Molecular weight: Translated: 36647; Mature: 36647

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVISDRQLKSDNINHWGLIILLCKGSPIFSDSWQEWKFRLKFIIRALISPRLTFNFLIL
CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEE
LSKQPFLHSLLRAQPDLPCKLHRPYLSHTFNNRQKLDVLRDHFQLITQCMPKALHYNYLH
ECCCHHHHHHHHCCCCCCCEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RTPYRLVTLTGKGGEKYSLYLGIIPKLNKEGEITLMLANEQQQTLALLTFSLFYYQQQKT
CCCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCE
LFIGGLQGADNKTPHHEIQACTKACHGLFPKRLALEATCYLAELMGIEEIIAVGNATHIY
EEEEECCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHCCCHHHHH
QNWRYRAKKKNKLHADYDGFWLSLGGNPDTEGHFRLPTKIVRKPLTEIASKKRAEYRRRY
HHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHH
VLLEQLEAGLAAHFM
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MRVISDRQLKSDNINHWGLIILLCKGSPIFSDSWQEWKFRLKFIIRALISPRLTFNFLIL
CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEE
LSKQPFLHSLLRAQPDLPCKLHRPYLSHTFNNRQKLDVLRDHFQLITQCMPKALHYNYLH
ECCCHHHHHHHHCCCCCCCEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RTPYRLVTLTGKGGEKYSLYLGIIPKLNKEGEITLMLANEQQQTLALLTFSLFYYQQQKT
CCCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCE
LFIGGLQGADNKTPHHEIQACTKACHGLFPKRLALEATCYLAELMGIEEIIAVGNATHIY
EEEEECCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHCCCHHHHH
QNWRYRAKKKNKLHADYDGFWLSLGGNPDTEGHFRLPTKIVRKPLTEIASKKRAEYRRRY
HHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHH
VLLEQLEAGLAAHFM
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]