| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is hcp [H]
Identifier: 218928508
GI number: 218928508
Start: 1524958
End: 1526610
Strand: Reverse
Name: hcp [H]
Synonym: YPO1360
Alternate gene names: 218928508
Gene position: 1526610-1524958 (Counterclockwise)
Preceding gene: 218928509
Following gene: 218928507
Centisome position: 32.8
GC content: 50.76
Gene sequence:
>1653_bases ATGTTCTGTGTGCAATGTGAACAAACTATCCGAACGCCAGCAGGTAACGGCTGCTCTTACGCGCAGGGAATGTGTGGAAA AACCGCCGAAACCTCAGATCTACAAGACTTGCTGGTTGCTGTATTACAGGGGCTATCGGCTTGGGCGTTACAAGCCCGTG AACTGGGTATTATCGATAGCCAAATTGACAGCTTTGCCCCCAGAGCATTTTTCTCAACGCTGACCAACGTGAATTTCGAT TCCGACCGTATTGTGGAATACGCCAAAGACGCTATTTTACTGCGCCACTCTCTGGCTGTCCGTTGCCGCCTGTTGGATAG CACAATTACCGTTGATCACCCACTGGCTGAGTTGCAACTGGTGGCAGACGATATCCCTTCTCTGCTGCAACAATCACAGC AGTTCGCCCTCAATAACGATAAAGCGGATGTGGGCGATGATATTCACGGCCTGCGTATGCTGTGCTTATACGGCTTGAAA GGCGCGGCGGCTTATATGGAACACGCCCATGTATTAGGCCAGTCTGATGAGCAAATTTATGCGGAGTACCATGCCTATAT GGCCTGGTTGGGCACCCAGCCCCGTGATGTCGATACCTTACTGAATAACGCCATGGGTATTGGTAAAATGAACTTCAATG TGATGGCCATTTTAGATCAGGGCGAAACCCAGGCCTATGGCGATCCACAACCGACGTCCGTTAATGTCCGCCCGGTAGCA GGCAAAGCGATTTTAATTTCCGGCCATGACCTGAAAGATTTACACATGCTGCTGGAGCAGACGCAGGGCACAGGCATTAA TATTTACACTCACGGTGAAATGTTGCCCGCTCACGGCTATCCGGAGTTAAAACGTTATCCACATTTGGTGGGGAACTACG GCAGCGGCTGGCAGAATCAGCAGACCGAATTCGCCAAGTTCCCTGGGCCGATCCTGATGACTTCCAACTGTATTATTGAT CCGAATGTGGGCAACTACGGTGACCGCATCTGGACTCGCAGCATCGTTGGCTGGCCAGGTGTCAACCACTTAGACGGGGA TAATTTCGCCCCGGTGATTGAGCAAGCGCTCGGAATGGCGGGCTTCCCCTACAGTGAACTGGAACACCTGATTACTGTCG GTTTTGGCCGCCAGACACTCCTAAATGCCGCTGATACCGTTATTGATTTGGTTGCCAGTAAAAAGCTACGCCATGTCTTC TTGGTAGGGGGATGTGATGGTAGCCGTACTGAGCGCAGTTATTTCACCGATTTCGCCCGCAGTGTGCCGCAAGATTGCAT CATTATGACGCTAGCCTGTGGCAAATACCGCTTCAATAAACTGGACTTCGGCACTCTGGAAGGATTACCGCGCTTACTGG ACGTCGGCCAATGTAATGACGCATACGCCGCTATCATGTTGGCGGTTAAATTGTCGGAAAAATTGGGTTGCACCGTCAAT GACCTGCCTCTCAGTTTGGTGCTGTCATGGTTTGAGCAAAAAGCCATTGTCATTCTGCTCACGCTATTGTCGCTGGGTGT GAAGAATATTTACACCGGCCCAACGGCACCAGGTTTCCTGACCGACAACCTGATGGCGATCCTTTATGAGAAATTTGGTA TGCAGCCAATAACCACCGTAGAACAGGATATGCAGGCGATTTTGGGCCATTAA
Upstream 100 bases:
>100_bases ATAAGTGAATATTGCATTAAAAATACCTTTTTAAACCGATGGCGTATCTCTATGCTCCAAAACACGCATTACAAATACAA CTTTAAAAAGGAAAATAATA
Downstream 100 bases:
>100_bases GTTAATTATACCTTGCCTGGTCAATCGCCTTTCTCGCCGTTGACCGGGCTATTATTGCACGCTGTTTGCGACGTCTTTTG CCAGAGAATGACCTGATTCA
Product: hydroxylamine reductase
Products: NA
Alternate protein names: Hybrid-cluster protein; HCP [H]
Number of amino acids: Translated: 550; Mature: 550
Protein sequence:
>550_residues MFCVQCEQTIRTPAGNGCSYAQGMCGKTAETSDLQDLLVAVLQGLSAWALQARELGIIDSQIDSFAPRAFFSTLTNVNFD SDRIVEYAKDAILLRHSLAVRCRLLDSTITVDHPLAELQLVADDIPSLLQQSQQFALNNDKADVGDDIHGLRMLCLYGLK GAAAYMEHAHVLGQSDEQIYAEYHAYMAWLGTQPRDVDTLLNNAMGIGKMNFNVMAILDQGETQAYGDPQPTSVNVRPVA GKAILISGHDLKDLHMLLEQTQGTGINIYTHGEMLPAHGYPELKRYPHLVGNYGSGWQNQQTEFAKFPGPILMTSNCIID PNVGNYGDRIWTRSIVGWPGVNHLDGDNFAPVIEQALGMAGFPYSELEHLITVGFGRQTLLNAADTVIDLVASKKLRHVF LVGGCDGSRTERSYFTDFARSVPQDCIIMTLACGKYRFNKLDFGTLEGLPRLLDVGQCNDAYAAIMLAVKLSEKLGCTVN DLPLSLVLSWFEQKAIVILLTLLSLGVKNIYTGPTAPGFLTDNLMAILYEKFGMQPITTVEQDMQAILGH
Sequences:
>Translated_550_residues MFCVQCEQTIRTPAGNGCSYAQGMCGKTAETSDLQDLLVAVLQGLSAWALQARELGIIDSQIDSFAPRAFFSTLTNVNFD SDRIVEYAKDAILLRHSLAVRCRLLDSTITVDHPLAELQLVADDIPSLLQQSQQFALNNDKADVGDDIHGLRMLCLYGLK GAAAYMEHAHVLGQSDEQIYAEYHAYMAWLGTQPRDVDTLLNNAMGIGKMNFNVMAILDQGETQAYGDPQPTSVNVRPVA GKAILISGHDLKDLHMLLEQTQGTGINIYTHGEMLPAHGYPELKRYPHLVGNYGSGWQNQQTEFAKFPGPILMTSNCIID PNVGNYGDRIWTRSIVGWPGVNHLDGDNFAPVIEQALGMAGFPYSELEHLITVGFGRQTLLNAADTVIDLVASKKLRHVF LVGGCDGSRTERSYFTDFARSVPQDCIIMTLACGKYRFNKLDFGTLEGLPRLLDVGQCNDAYAAIMLAVKLSEKLGCTVN DLPLSLVLSWFEQKAIVILLTLLSLGVKNIYTGPTAPGFLTDNLMAILYEKFGMQPITTVEQDMQAILGH >Mature_550_residues MFCVQCEQTIRTPAGNGCSYAQGMCGKTAETSDLQDLLVAVLQGLSAWALQARELGIIDSQIDSFAPRAFFSTLTNVNFD SDRIVEYAKDAILLRHSLAVRCRLLDSTITVDHPLAELQLVADDIPSLLQQSQQFALNNDKADVGDDIHGLRMLCLYGLK GAAAYMEHAHVLGQSDEQIYAEYHAYMAWLGTQPRDVDTLLNNAMGIGKMNFNVMAILDQGETQAYGDPQPTSVNVRPVA GKAILISGHDLKDLHMLLEQTQGTGINIYTHGEMLPAHGYPELKRYPHLVGNYGSGWQNQQTEFAKFPGPILMTSNCIID PNVGNYGDRIWTRSIVGWPGVNHLDGDNFAPVIEQALGMAGFPYSELEHLITVGFGRQTLLNAADTVIDLVASKKLRHVF LVGGCDGSRTERSYFTDFARSVPQDCIIMTLACGKYRFNKLDFGTLEGLPRLLDVGQCNDAYAAIMLAVKLSEKLGCTVN DLPLSLVLSWFEQKAIVILLTLLSLGVKNIYTGPTAPGFLTDNLMAILYEKFGMQPITTVEQDMQAILGH
Specific function: Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O [H]
COG id: COG1151
COG function: function code C; 6Fe-6S prismane cluster-containing protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HCP family [H]
Homologues:
Organism=Escherichia coli, GI87081794, Length=548, Percent_Identity=75.1824817518248, Blast_Score=879, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010048 - InterPro: IPR004137 - InterPro: IPR011254 - InterPro: IPR016099 - InterPro: IPR016100 [H]
Pfam domain/function: PF03063 Prismane [H]
EC number: NA
Molecular weight: Translated: 60387; Mature: 60387
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFCVQCEQTIRTPAGNGCSYAQGMCGKTAETSDLQDLLVAVLQGLSAWALQARELGIIDS CEEEECHHHHCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHCCCHHH QIDSFAPRAFFSTLTNVNFDSDRIVEYAKDAILLRHSLAVRCRLLDSTITVDHPLAELQL HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCEEECCCCHHHHHH VADDIPSLLQQSQQFALNNDKADVGDDIHGLRMLCLYGLKGAAAYMEHAHVLGQSDEQIY HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHH AEYHAYMAWLGTQPRDVDTLLNNAMGIGKMNFNVMAILDQGETQAYGDPQPTSVNVRPVA HHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEECC GKAILISGHDLKDLHMLLEQTQGTGINIYTHGEMLPAHGYPELKRYPHLVGNYGSGWQNQ CCEEEEECCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHCCHHHCCCCCCCCCC QTEFAKFPGPILMTSNCIIDPNVGNYGDRIWTRSIVGWPGVNHLDGDNFAPVIEQALGMA CCHHHHCCCCEEEECCEEECCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCC GFPYSELEHLITVGFGRQTLLNAADTVIDLVASKKLRHVFLVGGCDGSRTERSYFTDFAR CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHH SVPQDCIIMTLACGKYRFNKLDFGTLEGLPRLLDVGQCNDAYAAIMLAVKLSEKLGCTVN HCCCHHEEEEEECCCEECCCCCCHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCC DLPLSLVLSWFEQKAIVILLTLLSLGVKNIYTGPTAPGFLTDNLMAILYEKFGMQPITTV CCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHH EQDMQAILGH HHHHHHHHCC >Mature Secondary Structure MFCVQCEQTIRTPAGNGCSYAQGMCGKTAETSDLQDLLVAVLQGLSAWALQARELGIIDS CEEEECHHHHCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHCCCHHH QIDSFAPRAFFSTLTNVNFDSDRIVEYAKDAILLRHSLAVRCRLLDSTITVDHPLAELQL HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCEEECCCCHHHHHH VADDIPSLLQQSQQFALNNDKADVGDDIHGLRMLCLYGLKGAAAYMEHAHVLGQSDEQIY HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHH AEYHAYMAWLGTQPRDVDTLLNNAMGIGKMNFNVMAILDQGETQAYGDPQPTSVNVRPVA HHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEECC GKAILISGHDLKDLHMLLEQTQGTGINIYTHGEMLPAHGYPELKRYPHLVGNYGSGWQNQ CCEEEEECCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHCCHHHCCCCCCCCCC QTEFAKFPGPILMTSNCIIDPNVGNYGDRIWTRSIVGWPGVNHLDGDNFAPVIEQALGMA CCHHHHCCCCEEEECCEEECCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCC GFPYSELEHLITVGFGRQTLLNAADTVIDLVASKKLRHVFLVGGCDGSRTERSYFTDFAR CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHH SVPQDCIIMTLACGKYRFNKLDFGTLEGLPRLLDVGQCNDAYAAIMLAVKLSEKLGCTVN HCCCHHEEEEEECCCEECCCCCCHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCC DLPLSLVLSWFEQKAIVILLTLLSLGVKNIYTGPTAPGFLTDNLMAILYEKFGMQPITTV CCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHH EQDMQAILGH HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA