Definition Yersinia pestis CO92 chromosome, complete genome.
Accession NC_003143
Length 4,653,728

Click here to switch to the map view.

The map label for this gene is 218928496

Identifier: 218928496

GI number: 218928496

Start: 1512387

End: 1513232

Strand: Direct

Name: 218928496

Synonym: YPO1348

Alternate gene names: NA

Gene position: 1512387-1513232 (Clockwise)

Preceding gene: 218928495

Following gene: 218928510

Centisome position: 32.5

GC content: 48.58

Gene sequence:

>846_bases
ATGAACCAAGGCGCGTTATTGGCTATTCTCGCCTCCCTGATTTTCAGCGTGATGAATGTGTTAGTCAAAACCATCGCTGA
TGAAATTCCTACCGGTGAGATCGTATTCTTCCGCAGTAGCATTGGTTGCTTGTTGATTGGGTTACTGATGTATCAGCGTG
GGATAGCGTTCAGCCGTGAAGATCGCCCATTGTTGGTACTCCGGGGGACGATGGGCGCACTGTATCTGATTTGCTATTTT
TACAGTATTGCTCACCTGACATTGGCAGATGCCAGCATGTTGGCCTATCTGTCACCGTTTTTCTCGATTGTGCTGTCATT
ATTAGTGTTGCGCGAACGGGTGAATGCCACCATGGCTTTCTGGTTGGTGATGGTGATTATTGGCGCGATTATCTTGATCC
GCCCGTGGAATTTTTCCACCTATACGTTGGCGTCTCTGGTGGGGGTGATGAGTGCGGTATTTGCGGCTATTGCTTATTTG
TCGGTGAATAAGCTCACGAAGCGCCATCACAATTATGAAATCGTCTTCTACTTTTTGTTTATCACGACGCTGATCTCTAT
CCCACTGATGTGGCATAACTTTGTTTGGCCGAGTGGGTATCAGTTCGGCATTCTCATCGCCATTGCTCTTGTCTCATTGC
TAGGTCAGGTGGTTTTAACGCAGGCTTTCTCTTCGGACAACCTGATCGTGGTGTCGGTGGTGCGCTATATCGGCATTGTC
TTCAATATTACCTGGGGCTGGCTATTTTGGGATGAGGTGCCATTGATGTTGTCGTTGATGGGGGGCGGGTTGGTGGTGGT
ATCGTGCATTCAGTTGGGGTTACGCAGTAAAAAGAAGGCGGCCTGA

Upstream 100 bases:

>100_bases
TTATTGACCGGGTCGGTGAGGAACATTGCCATCCCTCTTTATTGGGGGACGATTGTGACAGGCAGGCGGCCATCATCGAA
CAACAATGGCGGAGCCAGAC

Downstream 100 bases:

>100_bases
TATTCACACAAGGCAAACTGATCGTTATACCCCAAATAATTCGAGTGGCAGGAAGGCAGCCAACGCATAGGCAGCTTGAA
GCATGACGGTTAGATAAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MNQGALLAILASLIFSVMNVLVKTIADEIPTGEIVFFRSSIGCLLIGLLMYQRGIAFSREDRPLLVLRGTMGALYLICYF
YSIAHLTLADASMLAYLSPFFSIVLSLLVLRERVNATMAFWLVMVIIGAIILIRPWNFSTYTLASLVGVMSAVFAAIAYL
SVNKLTKRHHNYEIVFYFLFITTLISIPLMWHNFVWPSGYQFGILIAIALVSLLGQVVLTQAFSSDNLIVVSVVRYIGIV
FNITWGWLFWDEVPLMLSLMGGGLVVVSCIQLGLRSKKKAA

Sequences:

>Translated_281_residues
MNQGALLAILASLIFSVMNVLVKTIADEIPTGEIVFFRSSIGCLLIGLLMYQRGIAFSREDRPLLVLRGTMGALYLICYF
YSIAHLTLADASMLAYLSPFFSIVLSLLVLRERVNATMAFWLVMVIIGAIILIRPWNFSTYTLASLVGVMSAVFAAIAYL
SVNKLTKRHHNYEIVFYFLFITTLISIPLMWHNFVWPSGYQFGILIAIALVSLLGQVVLTQAFSSDNLIVVSVVRYIGIV
FNITWGWLFWDEVPLMLSLMGGGLVVVSCIQLGLRSKKKAA
>Mature_281_residues
MNQGALLAILASLIFSVMNVLVKTIADEIPTGEIVFFRSSIGCLLIGLLMYQRGIAFSREDRPLLVLRGTMGALYLICYF
YSIAHLTLADASMLAYLSPFFSIVLSLLVLRERVNATMAFWLVMVIIGAIILIRPWNFSTYTLASLVGVMSAVFAAIAYL
SVNKLTKRHHNYEIVFYFLFITTLISIPLMWHNFVWPSGYQFGILIAIALVSLLGQVVLTQAFSSDNLIVVSVVRYIGIV
FNITWGWLFWDEVPLMLSLMGGGLVVVSCIQLGLRSKKKAA

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Homo sapiens, GI197927233, Length=290, Percent_Identity=25.1724137931034, Blast_Score=78, Evalue=8e-15,
Organism=Homo sapiens, GI23397492, Length=290, Percent_Identity=25.1724137931034, Blast_Score=78, Evalue=9e-15,
Organism=Drosophila melanogaster, GI24645940, Length=297, Percent_Identity=28.956228956229, Blast_Score=94, Evalue=9e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 31294; Mature: 31294

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQGALLAILASLIFSVMNVLVKTIADEIPTGEIVFFRSSIGCLLIGLLMYQRGIAFSRE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCC
DRPLLVLRGTMGALYLICYFYSIAHLTLADASMLAYLSPFFSIVLSLLVLRERVNATMAF
CCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WLVMVIIGAIILIRPWNFSTYTLASLVGVMSAVFAAIAYLSVNKLTKRHHNYEIVFYFLF
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
ITTLISIPLMWHNFVWPSGYQFGILIAIALVSLLGQVVLTQAFSSDNLIVVSVVRYIGIV
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
FNITWGWLFWDEVPLMLSLMGGGLVVVSCIQLGLRSKKKAA
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNQGALLAILASLIFSVMNVLVKTIADEIPTGEIVFFRSSIGCLLIGLLMYQRGIAFSRE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCC
DRPLLVLRGTMGALYLICYFYSIAHLTLADASMLAYLSPFFSIVLSLLVLRERVNATMAF
CCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WLVMVIIGAIILIRPWNFSTYTLASLVGVMSAVFAAIAYLSVNKLTKRHHNYEIVFYFLF
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
ITTLISIPLMWHNFVWPSGYQFGILIAIALVSLLGQVVLTQAFSSDNLIVVSVVRYIGIV
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
FNITWGWLFWDEVPLMLSLMGGGLVVVSCIQLGLRSKKKAA
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9252185 [H]