| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
Click here to switch to the map view.
The map label for this gene is 218928494
Identifier: 218928494
GI number: 218928494
Start: 1510239
End: 1511027
Strand: Direct
Name: 218928494
Synonym: YPO1346
Alternate gene names: NA
Gene position: 1510239-1511027 (Clockwise)
Preceding gene: 218928493
Following gene: 218928495
Centisome position: 32.45
GC content: 50.06
Gene sequence:
>789_bases TTGATGAAAGCCGATGTGCTGGCTCAACTCGCGGGGCTGCAGCAAGAAATCAGCCAGTTACACGATAATGCCCAGCAAAA TCAGTCTCATTTTGTGTTGTTAGAGCGCCGTTTTAGTCGCTTGCAGTCTTTTAATGACGAGCCACAGCTACAAGATTACC GGTTGCAGTTGGAGCACGATGATGCGGTGGTAAAACAAATTGCCCAATTGCGGCAGGTCGCCAATGCGGCACTGTGTGAC TATGAAAAACATCAGGTATGCGCCTTGTGTAGCCCATCCTCCAAGACTGACGACTACCTGACAAGTTTTAACCAATCGCT GCAACAAGAGATCAAACTCGCCGGTATGCAGATGGGTGAGAAGGTGTTGTTGGTGGGCAGCGGTGCCTTGCCGACCACGG CGCTGGTACTGGTTGCCAAGCTCGGTGCAACCGTCTTTTGCTACGATCACGATCCCGCCGCACAGCAGTTAGCTCGCCAG CTCGTTCAATCCCTCGGTCTGGAAAAACAGGTGCAATTTATTGATAACCTGAAAGAGTTAACGGACCGTCCCGTTGACCA CATTATCGTCGCTTCATTGGTGGCGGATAAACAGGCGTTATTAGCACAATTGGTTCCCTATGTGACCCGGTCCAGCAAAT TAGTGATGCGCTATGGCAATGGGCTGAAGTCTATTTTCAACTGCCCTTATTGCCATGAGGTGAACTGTTCACATTGGCGC ACCGCCAGTAAACCGGTGACCACCGGGCTTTATGACCTTATCATTTTGGAACCTAATCATCATGCATAA
Upstream 100 bases:
>100_bases TATTTGGTGTGGGTATCGAAAGTGGAACAAGCCCTTTGGGCTATCGCTACTTATTGCCCACTCAGTTCTTACCTACTCAT GGAGAGAAAATATGTATACG
Downstream 100 bases:
>100_bases CACCCTGCCGACCTTGATTCTGGGGGCCGGGCCTGCGGCTATCCAACTTGCGGTGGATATTAGTGCTACAGGTGATGCTA GGTTGGGGCTCTATAATCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MMKADVLAQLAGLQQEISQLHDNAQQNQSHFVLLERRFSRLQSFNDEPQLQDYRLQLEHDDAVVKQIAQLRQVANAALCD YEKHQVCALCSPSSKTDDYLTSFNQSLQQEIKLAGMQMGEKVLLVGSGALPTTALVLVAKLGATVFCYDHDPAAQQLARQ LVQSLGLEKQVQFIDNLKELTDRPVDHIIVASLVADKQALLAQLVPYVTRSSKLVMRYGNGLKSIFNCPYCHEVNCSHWR TASKPVTTGLYDLIILEPNHHA
Sequences:
>Translated_262_residues MMKADVLAQLAGLQQEISQLHDNAQQNQSHFVLLERRFSRLQSFNDEPQLQDYRLQLEHDDAVVKQIAQLRQVANAALCD YEKHQVCALCSPSSKTDDYLTSFNQSLQQEIKLAGMQMGEKVLLVGSGALPTTALVLVAKLGATVFCYDHDPAAQQLARQ LVQSLGLEKQVQFIDNLKELTDRPVDHIIVASLVADKQALLAQLVPYVTRSSKLVMRYGNGLKSIFNCPYCHEVNCSHWR TASKPVTTGLYDLIILEPNHHA >Mature_262_residues MMKADVLAQLAGLQQEISQLHDNAQQNQSHFVLLERRFSRLQSFNDEPQLQDYRLQLEHDDAVVKQIAQLRQVANAALCD YEKHQVCALCSPSSKTDDYLTSFNQSLQQEIKLAGMQMGEKVLLVGSGALPTTALVLVAKLGATVFCYDHDPAAQQLARQ LVQSLGLEKQVQFIDNLKELTDRPVDHIIVASLVADKQALLAQLVPYVTRSSKLVMRYGNGLKSIFNCPYCHEVNCSHWR TASKPVTTGLYDLIILEPNHHA
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29309; Mature: 29309
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKADVLAQLAGLQQEISQLHDNAQQNQSHFVLLERRFSRLQSFNDEPQLQDYRLQLEHD CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCC DAVVKQIAQLRQVANAALCDYEKHQVCALCSPSSKTDDYLTSFNQSLQQEIKLAGMQMGE HHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCC KVLLVGSGALPTTALVLVAKLGATVFCYDHDPAAQQLARQLVQSLGLEKQVQFIDNLKEL EEEEEECCCCHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH TDRPVDHIIVASLVADKQALLAQLVPYVTRSSKLVMRYGNGLKSIFNCPYCHEVNCSHWR HCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHCCCCCCCCCCHHCC TASKPVTTGLYDLIILEPNHHA CCCCCCCCCCEEEEEECCCCCC >Mature Secondary Structure MMKADVLAQLAGLQQEISQLHDNAQQNQSHFVLLERRFSRLQSFNDEPQLQDYRLQLEHD CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCC DAVVKQIAQLRQVANAALCDYEKHQVCALCSPSSKTDDYLTSFNQSLQQEIKLAGMQMGE HHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCC KVLLVGSGALPTTALVLVAKLGATVFCYDHDPAAQQLARQLVQSLGLEKQVQFIDNLKEL EEEEEECCCCHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH TDRPVDHIIVASLVADKQALLAQLVPYVTRSSKLVMRYGNGLKSIFNCPYCHEVNCSHWR HCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHCCCCCCCCCCHHCC TASKPVTTGLYDLIILEPNHHA CCCCCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA