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The map label for this gene is psaC

Identifier: 218928455

GI number: 218928455

Start: 1464242

End: 1466755

Strand: Direct

Name: psaC

Synonym: YPO1305

Alternate gene names: 218928455

Gene position: 1464242-1466755 (Clockwise)

Preceding gene: 218928454

Following gene: 218928458

Centisome position: 31.46

GC content: 49.2

Gene sequence:

>2514_bases
TTGAAAAAATTAATAGTTCAATTTACTACTATTACTCTATTGATGAGCACTTCATTTTTAGTGGGTGCCCAGCGTTATTC
TTTTGATCCCAATCTGCTAGTGGATGGCAATAACAACACTGATACCTCGTTATTTGAACAGGGCAATGAATTACCGGGCA
CCTATTTGGTGGATATTATCTTGAATGGGAATAAAGTGGACTCTACGAATGTGACATTTCATTCGGAGAAATCGCCATCA
GGAGAGCCTTTCTTGCAATCTTGCTTAACCAAGGAGCAGCTATCCCGCTATGGTGTGGATGTTGATGCCTATCCCGAGTT
ATCTCCAGCATTAAAAAACTCACAGACAAACCCGTGTGTCAATTTAGCCGCTATCCCTCAGGCCAGTGAAGAGTTCCAAT
TTTATAATATGCAGTTGGTACTGAGTATTCCACAAGCGGCTTTACGGCCTGAAGGTGAAGTGCCAATAGAACGCTGGGAT
GATGGTATTACGGCTTTTTTGCTGAACTACATGGCAAATATCAGTGAAACCCAGTTTCGTCAAAATGGTGGATACCGGCG
TTCACAATATATCCAGTTATATCCCGGTTTAAATTTGGGGGCGTGGCGTGTTCGTAATGCGACCAACTGGAGTCAATCTG
GCGATAGGGGGGGTAAATGGCAAAGTGCTTATACCTATGCCACTCGTGGGATTTATCGTTTAAAGAGCCGGGTGACCTTA
GGGGAGAGTTACACCCCAGGTGATTTTTTCGACAGCATTCCCTTTCGTGGCGTGATGTTGGGGGACGATCCTAATATGCA
GCCAAGTAACCAGCGGGATTTTATACCGGTGGTGCGTGGTATTGCCCGTAGTCAGGCGCAGGTGGAAATCAGACAAAATG
GTTATCTGATTTATAGTACGGTGGTGCCGCCGGGGCCGTTTGAACTCTCTGACGTGATCCCGAGTAAATCAGGCAGTGAC
CTACATGTTAGGGTGCTGGAAAGTAACGGGGCATCGCAGGCGTTTATTGTGCCTTATGAGGTGCCAGCCATTGCATTGCG
CAAAGGGCATTTGCGATACAATCTGGTGGCAGGGCAGTATCGCCCCGCCAATGCTGATGTTGAGACGCCTCCGGTCGCTC
AGGCAACCGTCGCCTACGGCTTGCCGTGGAACTTGACCGCATTTATCGGTGAGCAGTGGTCGCGGCATTATCAGGCAACC
TCTGCCGGATTAGGGGGGCTATTGGGGGAGTATGGCGCATTGTCATCCAGTATCACGCAGGCAACCAGTCAGTATCACCA
TCAACAACCGGTTAAAGGGCAAGCCTGGGAGGTTCGATACAACAAAACCTTACAAGCCTCTGATACGTCATTTTCATTGG
TGAATAGTCAATACAGCACTAATGGTTTCAGTACGTTATCTGATGTATTACAAAGTTACCGGCAGAGCGGGAGTGGCGAT
AATAGAGATAAAATTGACGAAAATTCTCGGTCAAGGGATTTGCGTAACCAAATCAGTGCGGTCATCGGGCAGTCATTGGG
CAAGTTTGGCTACCTGAACCTTAATTGGTCGCGGCAGGTCTACCGTGGGCCGATTCCGGCTAAGAATTCATTGGGAATAC
ACTATAACCTCAATGTCGGTAATAGTTTTTGGGCACTGAGTTGGGTGCAAAATGCGAATGAGAACAAGAATGATCGAATA
TTGAGTTTGTCTGTCAGTATTCCGCTGGGAGGTCATCACGATACTTATGCTTCCTATAGAATGACATCTTCCAACGGGAG
CAATGATCATGAGATAGGAATGTACGGCCAGGCTTTTGACTCTCGCTTGAGTTGGAGTGTGCGTCAGGCAGAGCATTATG
GTCAACCCAACTCAGGGCATAACAGCGGCTCACTCAGGTTGGGCTGGCAGGGTTCCTATGGCAATATCGCGGGAAATTAC
TACTATACTCCGAGCATACGTCAGTTATCCGCTGATGTTTCCGGAGGGGCGATCATCCATCGGCATGGGCTGACATTAGG
GCCGCAAATCAATGGCACCTCCGTGCTGGTTGAAGTTCCGGGCGTCGGCGGGGTGACCACCACAGAAGATCGCCGTCTGA
AAACAGATTTTCGCGGTTACAGCATTGTGTCTGGCCTCTCTCCTTATCAGGAGCACGATATCGTGTTGGAAACTGCAGAT
TTACCGCCGGATGCGGAGGTGGCAAAAACAGATACCAAGGTCTTGCCGACCGAGGGGGCGATTGTTCGTGCCAGTTTTAG
CCCGCAAATCGGGGCAAAGGCGCTGATGACGATCACCCGCGCTAATGGCCAAACCATTCCGTTTGGTGCGATGGCGAGCT
TGGTTAATCAGTCGGCCAATGCAGCCATTGTCGATGAAGGGGGGAAAGCCTATCTAACCGGGTTACCGGAAACAGGGCAG
TTATTGGTGCAATGGGGTAAAGATGCGGGCCAACAATGCCGGGTGGATTACCAGCTCTCGCCAGCGGAAAAAGGTGATAC
CGGGCTGTATATGCTCAGCGGAGTATGCCATTAA

Upstream 100 bases:

>100_bases
GGCAAGTGATTAATGATAATGGTGGTGTGAGCCGGGAATTTAAAAGCACAGTCCAGTAAGTTTCTATTTATATTTTTCAG
AAAATACCTGGGGTATTATT

Downstream 100 bases:

>100_bases
AGGCATCCGCGATGACACAATTCCCGTTAGGTTCAATTCCCGTCAGGTTCAATTCCCGCCAGGTTTACTGGCGGGCATTT
TCTACGTTACAACGAGGGCT

Product: outer membrane usher protein PsaC precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 837; Mature: 837

Protein sequence:

>837_residues
MKKLIVQFTTITLLMSTSFLVGAQRYSFDPNLLVDGNNNTDTSLFEQGNELPGTYLVDIILNGNKVDSTNVTFHSEKSPS
GEPFLQSCLTKEQLSRYGVDVDAYPELSPALKNSQTNPCVNLAAIPQASEEFQFYNMQLVLSIPQAALRPEGEVPIERWD
DGITAFLLNYMANISETQFRQNGGYRRSQYIQLYPGLNLGAWRVRNATNWSQSGDRGGKWQSAYTYATRGIYRLKSRVTL
GESYTPGDFFDSIPFRGVMLGDDPNMQPSNQRDFIPVVRGIARSQAQVEIRQNGYLIYSTVVPPGPFELSDVIPSKSGSD
LHVRVLESNGASQAFIVPYEVPAIALRKGHLRYNLVAGQYRPANADVETPPVAQATVAYGLPWNLTAFIGEQWSRHYQAT
SAGLGGLLGEYGALSSSITQATSQYHHQQPVKGQAWEVRYNKTLQASDTSFSLVNSQYSTNGFSTLSDVLQSYRQSGSGD
NRDKIDENSRSRDLRNQISAVIGQSLGKFGYLNLNWSRQVYRGPIPAKNSLGIHYNLNVGNSFWALSWVQNANENKNDRI
LSLSVSIPLGGHHDTYASYRMTSSNGSNDHEIGMYGQAFDSRLSWSVRQAEHYGQPNSGHNSGSLRLGWQGSYGNIAGNY
YYTPSIRQLSADVSGGAIIHRHGLTLGPQINGTSVLVEVPGVGGVTTTEDRRLKTDFRGYSIVSGLSPYQEHDIVLETAD
LPPDAEVAKTDTKVLPTEGAIVRASFSPQIGAKALMTITRANGQTIPFGAMASLVNQSANAAIVDEGGKAYLTGLPETGQ
LLVQWGKDAGQQCRVDYQLSPAEKGDTGLYMLSGVCH

Sequences:

>Translated_837_residues
MKKLIVQFTTITLLMSTSFLVGAQRYSFDPNLLVDGNNNTDTSLFEQGNELPGTYLVDIILNGNKVDSTNVTFHSEKSPS
GEPFLQSCLTKEQLSRYGVDVDAYPELSPALKNSQTNPCVNLAAIPQASEEFQFYNMQLVLSIPQAALRPEGEVPIERWD
DGITAFLLNYMANISETQFRQNGGYRRSQYIQLYPGLNLGAWRVRNATNWSQSGDRGGKWQSAYTYATRGIYRLKSRVTL
GESYTPGDFFDSIPFRGVMLGDDPNMQPSNQRDFIPVVRGIARSQAQVEIRQNGYLIYSTVVPPGPFELSDVIPSKSGSD
LHVRVLESNGASQAFIVPYEVPAIALRKGHLRYNLVAGQYRPANADVETPPVAQATVAYGLPWNLTAFIGEQWSRHYQAT
SAGLGGLLGEYGALSSSITQATSQYHHQQPVKGQAWEVRYNKTLQASDTSFSLVNSQYSTNGFSTLSDVLQSYRQSGSGD
NRDKIDENSRSRDLRNQISAVIGQSLGKFGYLNLNWSRQVYRGPIPAKNSLGIHYNLNVGNSFWALSWVQNANENKNDRI
LSLSVSIPLGGHHDTYASYRMTSSNGSNDHEIGMYGQAFDSRLSWSVRQAEHYGQPNSGHNSGSLRLGWQGSYGNIAGNY
YYTPSIRQLSADVSGGAIIHRHGLTLGPQINGTSVLVEVPGVGGVTTTEDRRLKTDFRGYSIVSGLSPYQEHDIVLETAD
LPPDAEVAKTDTKVLPTEGAIVRASFSPQIGAKALMTITRANGQTIPFGAMASLVNQSANAAIVDEGGKAYLTGLPETGQ
LLVQWGKDAGQQCRVDYQLSPAEKGDTGLYMLSGVCH
>Mature_837_residues
MKKLIVQFTTITLLMSTSFLVGAQRYSFDPNLLVDGNNNTDTSLFEQGNELPGTYLVDIILNGNKVDSTNVTFHSEKSPS
GEPFLQSCLTKEQLSRYGVDVDAYPELSPALKNSQTNPCVNLAAIPQASEEFQFYNMQLVLSIPQAALRPEGEVPIERWD
DGITAFLLNYMANISETQFRQNGGYRRSQYIQLYPGLNLGAWRVRNATNWSQSGDRGGKWQSAYTYATRGIYRLKSRVTL
GESYTPGDFFDSIPFRGVMLGDDPNMQPSNQRDFIPVVRGIARSQAQVEIRQNGYLIYSTVVPPGPFELSDVIPSKSGSD
LHVRVLESNGASQAFIVPYEVPAIALRKGHLRYNLVAGQYRPANADVETPPVAQATVAYGLPWNLTAFIGEQWSRHYQAT
SAGLGGLLGEYGALSSSITQATSQYHHQQPVKGQAWEVRYNKTLQASDTSFSLVNSQYSTNGFSTLSDVLQSYRQSGSGD
NRDKIDENSRSRDLRNQISAVIGQSLGKFGYLNLNWSRQVYRGPIPAKNSLGIHYNLNVGNSFWALSWVQNANENKNDRI
LSLSVSIPLGGHHDTYASYRMTSSNGSNDHEIGMYGQAFDSRLSWSVRQAEHYGQPNSGHNSGSLRLGWQGSYGNIAGNY
YYTPSIRQLSADVSGGAIIHRHGLTLGPQINGTSVLVEVPGVGGVTTTEDRRLKTDFRGYSIVSGLSPYQEHDIVLETAD
LPPDAEVAKTDTKVLPTEGAIVRASFSPQIGAKALMTITRANGQTIPFGAMASLVNQSANAAIVDEGGKAYLTGLPETGQ
LLVQWGKDAGQQCRVDYQLSPAEKGDTGLYMLSGVCH

Specific function: Involved in the export and assembly of psaA (pH 6) fimbrial subunits across the outer membrane

COG id: COG3188

COG function: function code NU; P pilus assembly protein, porin PapC

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial export usher family

Homologues:

Organism=Escherichia coli, GI1790772, Length=867, Percent_Identity=35.6401384083045, Blast_Score=475, Evalue=1e-135,
Organism=Escherichia coli, GI1787172, Length=860, Percent_Identity=35, Blast_Score=473, Evalue=1e-134,
Organism=Escherichia coli, GI1786744, Length=857, Percent_Identity=34.5390898483081, Blast_Score=452, Evalue=1e-128,
Organism=Escherichia coli, GI1789533, Length=853, Percent_Identity=35.5216881594373, Blast_Score=431, Evalue=1e-121,
Organism=Escherichia coli, GI1786332, Length=876, Percent_Identity=29.7945205479452, Blast_Score=313, Evalue=3e-86,
Organism=Escherichia coli, GI1788427, Length=830, Percent_Identity=26.3855421686747, Blast_Score=266, Evalue=4e-72,
Organism=Escherichia coli, GI87081778, Length=803, Percent_Identity=27.1481942714819, Blast_Score=231, Evalue=2e-61,
Organism=Escherichia coli, GI1789610, Length=819, Percent_Identity=25.5189255189255, Blast_Score=135, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PSAC_YERPE (P31527)

Other databases:

- EMBL:   X97759
- EMBL:   AL590842
- EMBL:   AE009952
- EMBL:   AE017042
- EMBL:   M86713
- PIR:   AD0159
- RefSeq:   NP_670180.1
- RefSeq:   NP_992653.1
- RefSeq:   YP_002346330.1
- ProteinModelPortal:   P31527
- SMR:   P31527
- IntAct:   P31527
- GeneID:   1147827
- GeneID:   1174147
- GeneID:   2765948
- GenomeReviews:   AE009952_GR
- GenomeReviews:   AE017042_GR
- GenomeReviews:   AL590842_GR
- KEGG:   ype:YPO1305
- KEGG:   ypk:y2880
- KEGG:   ypm:YP_1287
- HOGENOM:   HBG511492
- OMA:   SRTTLML
- ProtClustDB:   CLSK888805
- BioCyc:   YPES187410:Y2880-MONOMER
- BioCyc:   YPES214092:YPO1305-MONOMER
- InterPro:   IPR000015
- InterPro:   IPR018030

Pfam domain/function: PF00577 Usher

EC number: NA

Molecular weight: Translated: 91703; Mature: 91703

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: PS01151 FIMBRIAL_USHER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLIVQFTTITLLMSTSFLVGAQRYSFDPNLLVDGNNNTDTSLFEQGNELPGTYLVDII
CCCEEEEHHHHHHHHHHHHHEECHHCCCCCCEEEECCCCCCHHHHHCCCCCCCEEEEEEE
LNGNKVDSTNVTFHSEKSPSGEPFLQSCLTKEQLSRYGVDVDAYPELSPALKNSQTNPCV
ECCCEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCE
NLAAIPQASEEFQFYNMQLVLSIPQAALRPEGEVPIERWDDGITAFLLNYMANISETQFR
EEEECCCCCCCEEEEEEEEEEECCHHHCCCCCCCCHHHHCCHHHHHHHHHHHCCHHHHHH
QNGGYRRSQYIQLYPGLNLGAWRVRNATNWSQSGDRGGKWQSAYTYATRGIYRLKSRVTL
HCCCCCCCEEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEE
GESYTPGDFFDSIPFRGVMLGDDPNMQPSNQRDFIPVVRGIARSQAQVEIRQNGYLIYST
CCCCCCCHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCEEEEEE
VVPPGPFELSDVIPSKSGSDLHVRVLESNGASQAFIVPYEVPAIALRKGHLRYNLVAGQY
CCCCCCCCHHHCCCCCCCCCEEEEEEECCCCCEEEEEEECCCEEEEECCCEEEEEEECCC
RPANADVETPPVAQATVAYGLPWNLTAFIGEQWSRHYQATSAGLGGLLGEYGALSSSITQ
CCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
ATSQYHHQQPVKGQAWEVRYNKTLQASDTSFSLVNSQYSTNGFSTLSDVLQSYRQSGSGD
HHHHHHHCCCCCCCEEEEEECCEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCC
NRDKIDENSRSRDLRNQISAVIGQSLGKFGYLNLNWSRQVYRGPIPAKNSLGIHYNLNVG
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHCCCCCCCCCCCEEEEEECCC
NSFWALSWVQNANENKNDRILSLSVSIPLGGHHDTYASYRMTSSNGSNDHEIGMYGQAFD
CCEEEEEEHHCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCEEEEEHHHHH
SRLSWSVRQAEHYGQPNSGHNSGSLRLGWQGSYGNIAGNYYYTPSIRQLSADVSGGAIIH
HHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCEEECCCHHHHCCCCCCCEEEE
RHGLTLGPQINGTSVLVEVPGVGGVTTTEDRRLKTDFRGYSIVSGLSPYQEHDIVLETAD
ECCCEECCCCCCCEEEEECCCCCCCCCCCCCEEHHCCCCEEEECCCCCCCCCCEEEEECC
LPPDAEVAKTDTKVLPTEGAIVRASFSPQIGAKALMTITRANGQTIPFGAMASLVNQSAN
CCCCCCHHCCCCEEECCCCCEEEEECCCCCCCEEEEEEEECCCCCCCHHHHHHHHCCCCC
AAIVDEGGKAYLTGLPETGQLLVQWGKDAGQQCRVDYQLSPAEKGDTGLYMLSGVCH
EEEEECCCCEEEECCCCCCHHHEEECCCCCCEEEEEEEECCCCCCCCCEEEECCCCC
>Mature Secondary Structure
MKKLIVQFTTITLLMSTSFLVGAQRYSFDPNLLVDGNNNTDTSLFEQGNELPGTYLVDII
CCCEEEEHHHHHHHHHHHHHEECHHCCCCCCEEEECCCCCCHHHHHCCCCCCCEEEEEEE
LNGNKVDSTNVTFHSEKSPSGEPFLQSCLTKEQLSRYGVDVDAYPELSPALKNSQTNPCV
ECCCEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCE
NLAAIPQASEEFQFYNMQLVLSIPQAALRPEGEVPIERWDDGITAFLLNYMANISETQFR
EEEECCCCCCCEEEEEEEEEEECCHHHCCCCCCCCHHHHCCHHHHHHHHHHHCCHHHHHH
QNGGYRRSQYIQLYPGLNLGAWRVRNATNWSQSGDRGGKWQSAYTYATRGIYRLKSRVTL
HCCCCCCCEEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEE
GESYTPGDFFDSIPFRGVMLGDDPNMQPSNQRDFIPVVRGIARSQAQVEIRQNGYLIYST
CCCCCCCHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCEEEEEE
VVPPGPFELSDVIPSKSGSDLHVRVLESNGASQAFIVPYEVPAIALRKGHLRYNLVAGQY
CCCCCCCCHHHCCCCCCCCCEEEEEEECCCCCEEEEEEECCCEEEEECCCEEEEEEECCC
RPANADVETPPVAQATVAYGLPWNLTAFIGEQWSRHYQATSAGLGGLLGEYGALSSSITQ
CCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
ATSQYHHQQPVKGQAWEVRYNKTLQASDTSFSLVNSQYSTNGFSTLSDVLQSYRQSGSGD
HHHHHHHCCCCCCCEEEEEECCEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCC
NRDKIDENSRSRDLRNQISAVIGQSLGKFGYLNLNWSRQVYRGPIPAKNSLGIHYNLNVG
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHCCCCCCCCCCCEEEEEECCC
NSFWALSWVQNANENKNDRILSLSVSIPLGGHHDTYASYRMTSSNGSNDHEIGMYGQAFD
CCEEEEEEHHCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCEEEEEHHHHH
SRLSWSVRQAEHYGQPNSGHNSGSLRLGWQGSYGNIAGNYYYTPSIRQLSADVSGGAIIH
HHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCEEECCCHHHHCCCCCCCEEEE
RHGLTLGPQINGTSVLVEVPGVGGVTTTEDRRLKTDFRGYSIVSGLSPYQEHDIVLETAD
ECCCEECCCCCCCEEEEECCCCCCCCCCCCCEEHHCCCCEEEECCCCCCCCCCEEEEECC
LPPDAEVAKTDTKVLPTEGAIVRASFSPQIGAKALMTITRANGQTIPFGAMASLVNQSAN
CCCCCCHHCCCCEEECCCCCEEEEECCCCCCCEEEEEEEECCCCCCCHHHHHHHHCCCCC
AAIVDEGGKAYLTGLPETGQLLVQWGKDAGQQCRVDYQLSPAEKGDTGLYMLSGVCH
EEEEECCCCEEEECCCCCCHHHEEECCCCCCEEEEEEEECCCCCCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430; 8100346