| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is yeiQ [H]
Identifier: 218928433
GI number: 218928433
Start: 1439154
End: 1440626
Strand: Reverse
Name: yeiQ [H]
Synonym: YPO1280
Alternate gene names: 218928433
Gene position: 1440626-1439154 (Counterclockwise)
Preceding gene: 218928435
Following gene: 218928430
Centisome position: 30.96
GC content: 51.26
Gene sequence:
>1473_bases ATGAACACCATTGCCAACAGCGCCCTTCCCTCAACCGTACAGCAACCCAATTATGATCGGGCGGCGCTGAGAAGCCGTAT TGTTCACATTGGATTTGGTGCTTTTCATCGAGCCCACCAGGCACTGCTCACTTACCGGGTATTAAATACGCAAGGCGGTG ATTGGGGTATTTGCGAAGTCAGCCTCTTTGGTGCTGATACGCTGATTCAAGAGTTACGTAAACAGGACCACCTCTTTTCC GTCTTGGAAAAAGGGGCGCAGGGTAATCAGGCGATTGTGGTCGGTTCAGTGTGTGAATCCGTACATGCTCGTTTAGACGG CATCATGCAAGTATTGGCGAAATTGGTCGAGCCACAAGTGGCCATCGTCTCTCTGACCATCACCGAGAAAGGGTATTGCA TCGAGCCGGGCACCGGCCAATTGGATCTGCAGAACGAGTTTATTCGTGCCGATCTGGCCGTCCCTAATGCACCGACATCA GCACCTGGGGTGTTGGTGGAAGCACTCCGCTTGCGCCGTTTACGTGGATTGCCTCCCTTTACCGTCCTTTCTTGCGATAA CATCCCGGAAAACGGTGATGTGGTAAGAAACGCGGTACTCGGTCTGGCCACGGTCCGTGATCCAGCGCTGGCTAATTGGA TTCAGCAACATGTCACTTTCCCGAACACCATGGTTGACCGCATCGTTCCCGCAGCGACAGCGGAAACGTTACAGGAAATC GCCGATACCCTTGGGGTCGCAGACTCTTGTGGGATCGCCTGCGAACCCTTTATTCAGTGGGTCGTCGAAGACAAATTTGT TGCAGGCCGTCCAGATTGGCAAGTGGCGGGCGTACAGTTGGTTGATGATGTCTTGCCGTTTGAAGAAATGAAGCTACGTA TGCTGAACGGGAGCCATTCGTATCTCTCTTATTTAGGCTATCTGGCCGGTTATCAACATATTAATGATTGTATGGCTGAC GAGAATTATCGCCTAACGGCTCGTCGCTTAATGATGAATGAGCAAGCGCCCACTTTACGTGTCACCGGTATTGATCTGAA TGCTTATGCTGATCAGTTGATTGAGCGTTACTGTAACCCCGCGCTCAAACACCGCACCTGGCAAATTGCCATGGATGGGA GCCAGAAATTACCACAACGGATGTTGGATTCCGTCCGTTGGCATTTAAAACAGGGTAATGCGTATCCTTGTCTGGCTTTA GGCATTGCAGGTTGGATGCGCTATGTAGGGGGCATCGATGATAACGGTCAGGTTATTGATATCCGTGATCCGATGGTGGA TAGCTTTAAACAATGCGTTGCGGCCAGCGAAGATGGTGCGGCTCGGGTACAAAGTTTGCTGACACTGAAAGCACTGTTTG GTGAAACGCTGCCACAACAGCCAACATTTGTGCAGGCAGTGACCGAGGCTTATCTCAGCTTGCAACAATTTGGCGCGAAA GAGACAGTACGCCGCTTAGCCGAACAGGCTTAA
Upstream 100 bases:
>100_bases AGCCACACAAAACTGGTCTAACAACTTTTCTATTTGCCACCTTTTATGTTAATCCCCATCAGTCCCCGTACTGTCAGGGG GAATAATTCTGGAGCCACCT
Downstream 100 bases:
>100_bases GACACACGACGATGAGCTGAATCAAGGCTATTCAGCTCATCGGTATTGTTGGCGTTTAGTTCTGTTGATATTAGTTCTGT TGATATTAGTTCTGTTGACG
Product: putative D-mannonate oxidoreductase
Products: D-fructuronate; NADH; H+
Alternate protein names: NA
Number of amino acids: Translated: 490; Mature: 490
Protein sequence:
>490_residues MNTIANSALPSTVQQPNYDRAALRSRIVHIGFGAFHRAHQALLTYRVLNTQGGDWGICEVSLFGADTLIQELRKQDHLFS VLEKGAQGNQAIVVGSVCESVHARLDGIMQVLAKLVEPQVAIVSLTITEKGYCIEPGTGQLDLQNEFIRADLAVPNAPTS APGVLVEALRLRRLRGLPPFTVLSCDNIPENGDVVRNAVLGLATVRDPALANWIQQHVTFPNTMVDRIVPAATAETLQEI ADTLGVADSCGIACEPFIQWVVEDKFVAGRPDWQVAGVQLVDDVLPFEEMKLRMLNGSHSYLSYLGYLAGYQHINDCMAD ENYRLTARRLMMNEQAPTLRVTGIDLNAYADQLIERYCNPALKHRTWQIAMDGSQKLPQRMLDSVRWHLKQGNAYPCLAL GIAGWMRYVGGIDDNGQVIDIRDPMVDSFKQCVAASEDGAARVQSLLTLKALFGETLPQQPTFVQAVTEAYLSLQQFGAK ETVRRLAEQA
Sequences:
>Translated_490_residues MNTIANSALPSTVQQPNYDRAALRSRIVHIGFGAFHRAHQALLTYRVLNTQGGDWGICEVSLFGADTLIQELRKQDHLFS VLEKGAQGNQAIVVGSVCESVHARLDGIMQVLAKLVEPQVAIVSLTITEKGYCIEPGTGQLDLQNEFIRADLAVPNAPTS APGVLVEALRLRRLRGLPPFTVLSCDNIPENGDVVRNAVLGLATVRDPALANWIQQHVTFPNTMVDRIVPAATAETLQEI ADTLGVADSCGIACEPFIQWVVEDKFVAGRPDWQVAGVQLVDDVLPFEEMKLRMLNGSHSYLSYLGYLAGYQHINDCMAD ENYRLTARRLMMNEQAPTLRVTGIDLNAYADQLIERYCNPALKHRTWQIAMDGSQKLPQRMLDSVRWHLKQGNAYPCLAL GIAGWMRYVGGIDDNGQVIDIRDPMVDSFKQCVAASEDGAARVQSLLTLKALFGETLPQQPTFVQAVTEAYLSLQQFGAK ETVRRLAEQA >Mature_490_residues MNTIANSALPSTVQQPNYDRAALRSRIVHIGFGAFHRAHQALLTYRVLNTQGGDWGICEVSLFGADTLIQELRKQDHLFS VLEKGAQGNQAIVVGSVCESVHARLDGIMQVLAKLVEPQVAIVSLTITEKGYCIEPGTGQLDLQNEFIRADLAVPNAPTS APGVLVEALRLRRLRGLPPFTVLSCDNIPENGDVVRNAVLGLATVRDPALANWIQQHVTFPNTMVDRIVPAATAETLQEI ADTLGVADSCGIACEPFIQWVVEDKFVAGRPDWQVAGVQLVDDVLPFEEMKLRMLNGSHSYLSYLGYLAGYQHINDCMAD ENYRLTARRLMMNEQAPTLRVTGIDLNAYADQLIERYCNPALKHRTWQIAMDGSQKLPQRMLDSVRWHLKQGNAYPCLAL GIAGWMRYVGGIDDNGQVIDIRDPMVDSFKQCVAASEDGAARVQSLLTLKALFGETLPQQPTFVQAVTEAYLSLQQFGAK ETVRRLAEQA
Specific function: Unknown
COG id: COG0246
COG function: function code G; Mannitol-1-phosphate/altronate dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannitol dehydrogenase family. UxuB subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788497, Length=483, Percent_Identity=63.9751552795031, Blast_Score=659, Evalue=0.0, Organism=Escherichia coli, GI1787823, Length=484, Percent_Identity=57.4380165289256, Blast_Score=577, Evalue=1e-166, Organism=Escherichia coli, GI1790779, Length=489, Percent_Identity=58.8957055214724, Blast_Score=573, Evalue=1e-165, Organism=Escherichia coli, GI48994885, Length=499, Percent_Identity=24.6492985971944, Blast_Score=110, Evalue=3e-25, Organism=Escherichia coli, GI1790028, Length=254, Percent_Identity=27.1653543307087, Blast_Score=101, Evalue=1e-22, Organism=Saccharomyces cerevisiae, GI6324401, Length=494, Percent_Identity=38.663967611336, Blast_Score=362, Evalue=1e-101, Organism=Saccharomyces cerevisiae, GI6320765, Length=494, Percent_Identity=38.663967611336, Blast_Score=362, Evalue=1e-101,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR013328 - InterPro: IPR000669 - InterPro: IPR013118 - InterPro: IPR023027 - InterPro: IPR013131 - InterPro: IPR016040 [H]
Pfam domain/function: PF01232 Mannitol_dh; PF08125 Mannitol_dh_C [H]
EC number: 1.1.1.57
Molecular weight: Translated: 54008; Mature: 54008
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: PS00974 MANNITOL_DHGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTIANSALPSTVQQPNYDRAALRSRIVHIGFGAFHRAHQALLTYRVLNTQGGDWGICEV CCCCCCCCCCCHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEE SLFGADTLIQELRKQDHLFSVLEKGAQGNQAIVVGSVCESVHARLDGIMQVLAKLVEPQV EECCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCE AIVSLTITEKGYCIEPGTGQLDLQNEFIRADLAVPNAPTSAPGVLVEALRLRRLRGLPPF EEEEEEEECCCEEECCCCCCEECCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCE TVLSCDNIPENGDVVRNAVLGLATVRDPALANWIQQHVTFPNTMVDRIVPAATAETLQEI EEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHH ADTLGVADSCGIACEPFIQWVVEDKFVAGRPDWQVAGVQLVDDVLPFEEMKLRMLNGSHS HHHHCCCCCCCCCHHHHHHHHHHCCEECCCCCCEEHHHHHHHHHCCHHHHHHHHHCCCHH YLSYLGYLAGYQHINDCMADENYRLTARRLMMNEQAPTLRVTGIDLNAYADQLIERYCNP HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCH ALKHRTWQIAMDGSQKLPQRMLDSVRWHLKQGNAYPCLALGIAGWMRYVGGIDDNGQVID HHHCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCEEE IRDPMVDSFKQCVAASEDGAARVQSLLTLKALFGETLPQQPTFVQAVTEAYLSLQQFGAK CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHH ETVRRLAEQA HHHHHHHHCC >Mature Secondary Structure MNTIANSALPSTVQQPNYDRAALRSRIVHIGFGAFHRAHQALLTYRVLNTQGGDWGICEV CCCCCCCCCCCHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEE SLFGADTLIQELRKQDHLFSVLEKGAQGNQAIVVGSVCESVHARLDGIMQVLAKLVEPQV EECCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCE AIVSLTITEKGYCIEPGTGQLDLQNEFIRADLAVPNAPTSAPGVLVEALRLRRLRGLPPF EEEEEEEECCCEEECCCCCCEECCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCE TVLSCDNIPENGDVVRNAVLGLATVRDPALANWIQQHVTFPNTMVDRIVPAATAETLQEI EEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHH ADTLGVADSCGIACEPFIQWVVEDKFVAGRPDWQVAGVQLVDDVLPFEEMKLRMLNGSHS HHHHCCCCCCCCCHHHHHHHHHHCCEECCCCCCEEHHHHHHHHHCCHHHHHHHHHCCCHH YLSYLGYLAGYQHINDCMADENYRLTARRLMMNEQAPTLRVTGIDLNAYADQLIERYCNP HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCH ALKHRTWQIAMDGSQKLPQRMLDSVRWHLKQGNAYPCLALGIAGWMRYVGGIDDNGQVID HHHCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCEEE IRDPMVDSFKQCVAASEDGAARVQSLLTLKALFGETLPQQPTFVQAVTEAYLSLQQFGAK CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHH ETVRRLAEQA HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: D-mannonate; NAD+
Specific reaction: D-mannonate + NAD+ = D-fructuronate + NADH + H+
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]