| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is bcr [H]
Identifier: 218928421
GI number: 218928421
Start: 1424329
End: 1425528
Strand: Direct
Name: bcr [H]
Synonym: YPO1267
Alternate gene names: 218928421
Gene position: 1424329-1425528 (Clockwise)
Preceding gene: 218928420
Following gene: 218928422
Centisome position: 30.61
GC content: 50.08
Gene sequence:
>1200_bases GTGCAAAAAAACCGGACATCCCACATTGGTTTGATTTTTATCCTTGGGTTGTTGTCGATGCTGATGCCTTTGGCGATTGA TATGTATCTGCCAAGCATGCCGATTATTGCGCAGGAGTTTGGGGTCGAGAGTGGCCGTGTGCAAATGACGCTGAGCGCAT ATGTACTGGGTTTTGCCATTGGGCAAATGTTCTATGGGCCAATGGCTGACAGCATCGGGCGTAAGCCGGTCATTTTTTGG GGGACGCTGATTTTTGCGCTTGCAGGTATGGCATGTGCGTTGGTGCAGTCGGTCGAGCAACTCATTAATATGCGCTTCCT GCATGGCTTATCCGCCGCCGCCGCAAGTGTGGTGATTAATGCCTTGATGCGCGATATGTTCACCAAAGATGAGTTCTCCC GAATGATGTCTTTCGTGGTATTGGTGATGACGATTGCCCCCTTGCTCGCACCCATTATCGGTGGTGCACTGTTGGTGTGG TTTAGCTGGCATGCTATTTTCTGGACCATGGCGGGGGCGGCACTGGTTGGTGCGGTGTTAGTGGCGCTGTTTATCCAAGA AACATTGCCTCCTGAACGGCGACAGAAATTTCATCTGCGCACGACCATAGGTAATTTTGGCTCGTTATTTCGCCACAAAC GCGTACTGAGCTATATGCTGGCCAGTGGTTTCTCTTTTGCCGGTATGTTCTCATTCCTCAGCGCCGGTCCTTTTGTTTAT ATCGATTTAAACGGTGTTTCCCCGCAAAACTTTGGTTATTACTTTGCACTGAACATTGTCTTTTTGTTCTTGATGACCTT TATCAACAGCCGTAATGTGCGCCGTTTCGGGGCGCTGAAAATGTTCCGTTTTGGCCTGATAGTGCAATTTGTGATGGGGA TCTGGCTGGTAGTGGTTTGTGTCGCTGGCCTAGGATTCTGGGCCTTAGTTCTGGGCGTAGCTGCCTATGTTGGGTGTATC GCAATGATCACGTCTAACGCGATGGCAGTGATATTAGATGATTTCCCGCATATGGCAGGGACCGCCTCTTCTTTGGCGGG GACGTTGCGCTTTGGTATTGGTGCGGTGGTGGGGACGTTACTGTCGATGGCTTCGTCGCGCAGCGCCTGGCCAATGGTCA GTTCAATGGCATTTTGTATTATTGTCGCGATGTTGTTGTATCTGTATGCCAGTCGCCCAAGTCATAAAACCGTGTCATAA
Upstream 100 bases:
>100_bases GATTGTTTGTAATGAGATTGTTATTGCCGTGCGGGCCAGCGGTTCCGCACCGTTCTACTGCGGTATAATCTGCGGTAAGT TTTTGGAGGAGTGGTAAAGC
Downstream 100 bases:
>100_bases AAAATAGCCAGCGCCCATGCCGGATGGTATTCGATATGGATGGTATTCGACATGGATGGTATTTGACATGGATTGTGAAC GGTATGAGTGGTCGGCCATT
Product: bicyclomycin/multidrug efflux system
Products: Proton [Cytoplasm]; multidrug [Periplasm] [C]
Alternate protein names: Sulfonamide resistance protein [H]
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MQKNRTSHIGLIFILGLLSMLMPLAIDMYLPSMPIIAQEFGVESGRVQMTLSAYVLGFAIGQMFYGPMADSIGRKPVIFW GTLIFALAGMACALVQSVEQLINMRFLHGLSAAAASVVINALMRDMFTKDEFSRMMSFVVLVMTIAPLLAPIIGGALLVW FSWHAIFWTMAGAALVGAVLVALFIQETLPPERRQKFHLRTTIGNFGSLFRHKRVLSYMLASGFSFAGMFSFLSAGPFVY IDLNGVSPQNFGYYFALNIVFLFLMTFINSRNVRRFGALKMFRFGLIVQFVMGIWLVVVCVAGLGFWALVLGVAAYVGCI AMITSNAMAVILDDFPHMAGTASSLAGTLRFGIGAVVGTLLSMASSRSAWPMVSSMAFCIIVAMLLYLYASRPSHKTVS
Sequences:
>Translated_399_residues MQKNRTSHIGLIFILGLLSMLMPLAIDMYLPSMPIIAQEFGVESGRVQMTLSAYVLGFAIGQMFYGPMADSIGRKPVIFW GTLIFALAGMACALVQSVEQLINMRFLHGLSAAAASVVINALMRDMFTKDEFSRMMSFVVLVMTIAPLLAPIIGGALLVW FSWHAIFWTMAGAALVGAVLVALFIQETLPPERRQKFHLRTTIGNFGSLFRHKRVLSYMLASGFSFAGMFSFLSAGPFVY IDLNGVSPQNFGYYFALNIVFLFLMTFINSRNVRRFGALKMFRFGLIVQFVMGIWLVVVCVAGLGFWALVLGVAAYVGCI AMITSNAMAVILDDFPHMAGTASSLAGTLRFGIGAVVGTLLSMASSRSAWPMVSSMAFCIIVAMLLYLYASRPSHKTVS >Mature_399_residues MQKNRTSHIGLIFILGLLSMLMPLAIDMYLPSMPIIAQEFGVESGRVQMTLSAYVLGFAIGQMFYGPMADSIGRKPVIFW GTLIFALAGMACALVQSVEQLINMRFLHGLSAAAASVVINALMRDMFTKDEFSRMMSFVVLVMTIAPLLAPIIGGALLVW FSWHAIFWTMAGAALVGAVLVALFIQETLPPERRQKFHLRTTIGNFGSLFRHKRVLSYMLASGFSFAGMFSFLSAGPFVY IDLNGVSPQNFGYYFALNIVFLFLMTFINSRNVRRFGALKMFRFGLIVQFVMGIWLVVVCVAGLGFWALVLGVAAYVGCI AMITSNAMAVILDDFPHMAGTASSLAGTLRFGIGAVVGTLLSMASSRSAWPMVSSMAFCIIVAMLLYLYASRPSHKTVS
Specific function: Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance. Probable membrane translocase [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Bcr/CmlA family [H]
Homologues:
Organism=Escherichia coli, GI1788509, Length=396, Percent_Identity=68.6868686868687, Blast_Score=551, Evalue=1e-158, Organism=Escherichia coli, GI48994889, Length=357, Percent_Identity=29.6918767507003, Blast_Score=126, Evalue=3e-30, Organism=Escherichia coli, GI1790146, Length=391, Percent_Identity=26.5984654731458, Blast_Score=113, Evalue=3e-26, Organism=Escherichia coli, GI87082312, Length=340, Percent_Identity=26.1764705882353, Blast_Score=105, Evalue=5e-24, Organism=Escherichia coli, GI1787065, Length=257, Percent_Identity=25.6809338521401, Blast_Score=85, Evalue=9e-18, Organism=Escherichia coli, GI1790794, Length=230, Percent_Identity=24.3478260869565, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1790195, Length=166, Percent_Identity=26.5060240963855, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI87081738, Length=366, Percent_Identity=26.775956284153, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1787880, Length=203, Percent_Identity=26.6009852216749, Blast_Score=63, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6319480, Length=199, Percent_Identity=25.1256281407035, Blast_Score=70, Evalue=7e-13, Organism=Saccharomyces cerevisiae, GI6322071, Length=180, Percent_Identity=25.5555555555556, Blast_Score=66, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6319517, Length=187, Percent_Identity=23.5294117647059, Blast_Score=64, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6324264, Length=159, Percent_Identity=24.5283018867925, Blast_Score=63, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004812 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR004734 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 43628; Mature: 43628
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 7.0 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 7.0 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKNRTSHIGLIFILGLLSMLMPLAIDMYLPSMPIIAQEFGVESGRVQMTLSAYVLGFAI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEEHHHHHHHHHHHH GQMFYGPMADSIGRKPVIFWGTLIFALAGMACALVQSVEQLINMRFLHGLSAAAASVVIN HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALMRDMFTKDEFSRMMSFVVLVMTIAPLLAPIIGGALLVWFSWHAIFWTMAGAALVGAVL HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VALFIQETLPPERRQKFHLRTTIGNFGSLFRHKRVLSYMLASGFSFAGMFSFLSAGPFVY HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEE IDLNGVSPQNFGYYFALNIVFLFLMTFINSRNVRRFGALKMFRFGLIVQFVMGIWLVVVC EEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VAGLGFWALVLGVAAYVGCIAMITSNAMAVILDDFPHMAGTASSLAGTLRFGIGAVVGTL HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH LSMASSRSAWPMVSSMAFCIIVAMLLYLYASRPSHKTVS HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MQKNRTSHIGLIFILGLLSMLMPLAIDMYLPSMPIIAQEFGVESGRVQMTLSAYVLGFAI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEEHHHHHHHHHHHH GQMFYGPMADSIGRKPVIFWGTLIFALAGMACALVQSVEQLINMRFLHGLSAAAASVVIN HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALMRDMFTKDEFSRMMSFVVLVMTIAPLLAPIIGGALLVWFSWHAIFWTMAGAALVGAVL HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VALFIQETLPPERRQKFHLRTTIGNFGSLFRHKRVLSYMLASGFSFAGMFSFLSAGPFVY HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEE IDLNGVSPQNFGYYFALNIVFLFLMTFINSRNVRRFGALKMFRFGLIVQFVMGIWLVVVC EEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VAGLGFWALVLGVAAYVGCIAMITSNAMAVILDDFPHMAGTASSLAGTLRFGIGAVVGTL HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH LSMASSRSAWPMVSSMAFCIIVAMLLYLYASRPSHKTVS HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; multidrug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + multidrug [Cytoplasm] = Proton [Cytoplasm] + multidrug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8486276; 9278503; 2694948 [H]