| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218928394
Identifier: 218928394
GI number: 218928394
Start: 1399150
End: 1399767
Strand: Direct
Name: 218928394
Synonym: YPO1240
Alternate gene names: NA
Gene position: 1399150-1399767 (Clockwise)
Preceding gene: 218928393
Following gene: 218928395
Centisome position: 30.07
GC content: 51.94
Gene sequence:
>618_bases ATGACATTTATTGATGTCAGGCGTCGCTCATTTTTATCGGGTGAAATTATGAATGCAGCTCAAATCCGGCAACTGGCGGC AGCGGCGTTACGGGGAAAAACCGATGCGGAAGATCGTATCTATTTAACCGAAGCATGGCCGATAACCACCTATCCCGCCA TTTTGTTACAAACACCACTGGAGGTGAAAGAGTCGATTGGCCGTAATGCGCCGCAGTTTAAAACCATCACTACACTGCGT ATTAGCGGGCACATCCAACTGAGCGAGGGGGAAAACCCAGTCACTGTAGCAGCCTCGGCACTTGAGCGGTTGTGTGAACA AATCCAGCGGGCGGTCATTAACAGCTATGAACTGACCCGCCAGATCCAGCAATTCGCCAAGGTGCGTACCACGATGGGCA TTTATACCGCCTTGGGTAGTGATACTGCAGCACGTAGTGCCGCTACCCGCAGCGAACCCTCTGTAGCCGAAGTAAAAGTG GAGTTAGATCTTGAATATTATCAGGGGCCGGAGGATTTCTTTCCGCTGGAAACCCCACAACTGGCGGGCATCGACGTCAC TATTAACATGCCTGACGGTGCCCCGGAACCGCTGATCGCAATAACCCTCTCGGAGTAA
Upstream 100 bases:
>100_bases CATTGTGGTTTGTCACAAAGCAGCAAGCCAACAAGCCATTATTAAACGGAGGTGAGGTATTCATCTTCGCATGGGGTCAT TATTAATCAGGAGAGCCACG
Downstream 100 bases:
>100_bases TCCTATGTTCGTAAAACCAATGGCCGGTCGCGCTGTACGTGACCCGGTCAAGGGCACCTTTTTGCCTGAATTTGGCACCG AGGTGCCTGATAACGCGTTT
Product: putative ATP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MTFIDVRRRSFLSGEIMNAAQIRQLAAAALRGKTDAEDRIYLTEAWPITTYPAILLQTPLEVKESIGRNAPQFKTITTLR ISGHIQLSEGENPVTVAASALERLCEQIQRAVINSYELTRQIQQFAKVRTTMGIYTALGSDTAARSAATRSEPSVAEVKV ELDLEYYQGPEDFFPLETPQLAGIDVTINMPDGAPEPLIAITLSE
Sequences:
>Translated_205_residues MTFIDVRRRSFLSGEIMNAAQIRQLAAAALRGKTDAEDRIYLTEAWPITTYPAILLQTPLEVKESIGRNAPQFKTITTLR ISGHIQLSEGENPVTVAASALERLCEQIQRAVINSYELTRQIQQFAKVRTTMGIYTALGSDTAARSAATRSEPSVAEVKV ELDLEYYQGPEDFFPLETPQLAGIDVTINMPDGAPEPLIAITLSE >Mature_204_residues TFIDVRRRSFLSGEIMNAAQIRQLAAAALRGKTDAEDRIYLTEAWPITTYPAILLQTPLEVKESIGRNAPQFKTITTLRI SGHIQLSEGENPVTVAASALERLCEQIQRAVINSYELTRQIQQFAKVRTTMGIYTALGSDTAARSAATRSEPSVAEVKVE LDLEYYQGPEDFFPLETPQLAGIDVTINMPDGAPEPLIAITLSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22598; Mature: 22467
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFIDVRRRSFLSGEIMNAAQIRQLAAAALRGKTDAEDRIYLTEAWPITTYPAILLQTPL CCEEHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHCCCH EVKESIGRNAPQFKTITTLRISGHIQLSEGENPVTVAASALERLCEQIQRAVINSYELTR HHHHHHCCCCCCEEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QIQQFAKVRTTMGIYTALGSDTAARSAATRSEPSVAEVKVELDLEYYQGPEDFFPLETPQ HHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEEEEEEEEHHHCCCCCCCCCCCCC LAGIDVTINMPDGAPEPLIAITLSE CCCEEEEEECCCCCCCCEEEEEECC >Mature Secondary Structure TFIDVRRRSFLSGEIMNAAQIRQLAAAALRGKTDAEDRIYLTEAWPITTYPAILLQTPL CEEHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHCCCH EVKESIGRNAPQFKTITTLRISGHIQLSEGENPVTVAASALERLCEQIQRAVINSYELTR HHHHHHCCCCCCEEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QIQQFAKVRTTMGIYTALGSDTAARSAATRSEPSVAEVKVELDLEYYQGPEDFFPLETPQ HHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEEEEEEEEHHHCCCCCCCCCCCCC LAGIDVTINMPDGAPEPLIAITLSE CCCEEEEEECCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA