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The map label for this gene is 218928383

Identifier: 218928383

GI number: 218928383

Start: 1388071

End: 1389099

Strand: Direct

Name: 218928383

Synonym: YPO1228

Alternate gene names: NA

Gene position: 1388071-1389099 (Clockwise)

Preceding gene: 218928380

Following gene: 218928388

Centisome position: 29.83

GC content: 49.37

Gene sequence:

>1029_bases
ATGTTGGCTGCAACAGCGGTTGGCAGTAAAGGACGTAAAATGGCGAAGAAAAACCCCTATTATGATGCCAGCAAGCCACA
TCACACAGAGTTTGGATTTCAGAATATAGAACCGGTTGTTCATCATCCGCAGGATTTGAAACGCTGGCGTGAAGAGAGAA
AGCGCCAGTCGCTGCCTAAGCCGCCTCAGCAGGGCTACCCGCAGTTCGTTACAGATTGGTGGCAACAAGCTGACTTTTCA
GGGCTGCAAGATGCGTTGTGGTGGCTTGGTCATGCTTCATTATTGTTACGTATCAGTGGGCAGGCAGTGTTGTTTGACCC
TGTGCTTTCAAGCCGGGTTTCACCGGTTAATTTTTATGGCCCACAGCGCAAAACACCAATACCCGCCAGCGTACAGCAAC
TGCCCGATATTGATGTGATCGTGATCTCTCATAATCATTACGATCACTTGGATGTCACGACTATCACGCAATTATTGCGC
CGTTTCCCTGACGTGGTGTTTTTGGTCCCATTAGGGCTGAAAAACTGGTTGCGGCAGCATGGTGCTCGCCATGTTCATGA
GTTGGATTGGTGGGATCAACGGCTCGTCGCTGACTTTGAGTTCCATTGTGTGCCCGCCCGTCATTGGAGTATGCGCACTC
CTTGGGATCGGAATCACAGTTTGTGGTCTGGCTGGGTAGTGAAGCGGGGCGAAGTTAACTTTTATTTCAGTGGTGATACT
GGCTATTGCCAGCAATTACTGGATATCGGTGAGGCACTGGGGCCATTCAATTATGCGGCACTGCCAATTGGTGCTTATGC
ACCACGCTGGTTTATGCAGGCGCAACATATGGATCCACAACAATCGGTGCAATTGTTTCAAAAATTACACCAACCGGTGA
CGATCCCGATTCATTGGGGGGTCTTTGAACTGGCTGATGAGCCATTGGATGAACCACCAGAACAACTTCAACAGGCGTTA
ACCGATGCCGGAGTGGCGCACAATAAATTCGTACCAATTAAAATAGGTGCACGGATCATACTGGAATAG

Upstream 100 bases:

>100_bases
CGTATGAAATACCATCACTGATCCGGGGGTTATTGTTTACCCTGTGAGAAGGATCACCTTTGTTCTCATGTGATGTGTTA
CAGAAAATCCCAATTAATGT

Downstream 100 bases:

>100_bases
TCACGTTCCAGCGGGTGGATGAATAACCTGCTGGAACTGAATGACGGCGGTTCTGGTTGATAGCAGCAGCGCGTTAGATC
TTAAATTGATTAACGGTATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MLAATAVGSKGRKMAKKNPYYDASKPHHTEFGFQNIEPVVHHPQDLKRWREERKRQSLPKPPQQGYPQFVTDWWQQADFS
GLQDALWWLGHASLLLRISGQAVLFDPVLSSRVSPVNFYGPQRKTPIPASVQQLPDIDVIVISHNHYDHLDVTTITQLLR
RFPDVVFLVPLGLKNWLRQHGARHVHELDWWDQRLVADFEFHCVPARHWSMRTPWDRNHSLWSGWVVKRGEVNFYFSGDT
GYCQQLLDIGEALGPFNYAALPIGAYAPRWFMQAQHMDPQQSVQLFQKLHQPVTIPIHWGVFELADEPLDEPPEQLQQAL
TDAGVAHNKFVPIKIGARIILE

Sequences:

>Translated_342_residues
MLAATAVGSKGRKMAKKNPYYDASKPHHTEFGFQNIEPVVHHPQDLKRWREERKRQSLPKPPQQGYPQFVTDWWQQADFS
GLQDALWWLGHASLLLRISGQAVLFDPVLSSRVSPVNFYGPQRKTPIPASVQQLPDIDVIVISHNHYDHLDVTTITQLLR
RFPDVVFLVPLGLKNWLRQHGARHVHELDWWDQRLVADFEFHCVPARHWSMRTPWDRNHSLWSGWVVKRGEVNFYFSGDT
GYCQQLLDIGEALGPFNYAALPIGAYAPRWFMQAQHMDPQQSVQLFQKLHQPVTIPIHWGVFELADEPLDEPPEQLQQAL
TDAGVAHNKFVPIKIGARIILE
>Mature_342_residues
MLAATAVGSKGRKMAKKNPYYDASKPHHTEFGFQNIEPVVHHPQDLKRWREERKRQSLPKPPQQGYPQFVTDWWQQADFS
GLQDALWWLGHASLLLRISGQAVLFDPVLSSRVSPVNFYGPQRKTPIPASVQQLPDIDVIVISHNHYDHLDVTTITQLLR
RFPDVVFLVPLGLKNWLRQHGARHVHELDWWDQRLVADFEFHCVPARHWSMRTPWDRNHSLWSGWVVKRGEVNFYFSGDT
GYCQQLLDIGEALGPFNYAALPIGAYAPRWFMQAQHMDPQQSVQLFQKLHQPVTIPIHWGVFELADEPLDEPPEQLQQAL
TDAGVAHNKFVPIKIGARIILE

Specific function: Unknown

COG id: COG2220

COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To K.pneumoniae romA [H]

Homologues:

Organism=Homo sapiens, GI170932483, Length=277, Percent_Identity=40.7942238267148, Blast_Score=228, Evalue=6e-60,
Organism=Homo sapiens, GI170932481, Length=277, Percent_Identity=40.7942238267148, Blast_Score=228, Evalue=6e-60,
Organism=Caenorhabditis elegans, GI17543102, Length=263, Percent_Identity=39.9239543726236, Blast_Score=213, Evalue=1e-55,
Organism=Caenorhabditis elegans, GI17543100, Length=263, Percent_Identity=39.9239543726236, Blast_Score=213, Evalue=2e-55,
Organism=Caenorhabditis elegans, GI25148824, Length=263, Percent_Identity=39.9239543726236, Blast_Score=212, Evalue=2e-55,
Organism=Caenorhabditis elegans, GI17543104, Length=262, Percent_Identity=39.3129770992366, Blast_Score=198, Evalue=3e-51,
Organism=Saccharomyces cerevisiae, GI6325154, Length=252, Percent_Identity=31.3492063492063, Blast_Score=138, Evalue=1e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39479; Mature: 39479

Theoretical pI: Translated: 7.59; Mature: 7.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAATAVGSKGRKMAKKNPYYDASKPHHTEFGFQNIEPVVHHPQDLKRWREERKRQSLPK
CCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCC
PPQQGYPQFVTDWWQQADFSGLQDALWWLGHASLLLRISGQAVLFDPVLSSRVSPVNFYG
CCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHEEEEECCCEEEECHHHHCCCCCCCCCC
PQRKTPIPASVQQLPDIDVIVISHNHYDHLDVTTITQLLRRFPDVVFLVPLGLKNWLRQH
CCCCCCCCHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHH
GARHVHELDWWDQRLVADFEFHCVPARHWSMRTPWDRNHSLWSGWVVKRGEVNFYFSGDT
CCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCEECEEEEECCEEEEECCCH
GYCQQLLDIGEALGPFNYAALPIGAYAPRWFMQAQHMDPQQSVQLFQKLHQPVTIPIHWG
HHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEECC
VFELADEPLDEPPEQLQQALTDAGVAHNKFVPIKIGARIILE
HHHHCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCEEECC
>Mature Secondary Structure
MLAATAVGSKGRKMAKKNPYYDASKPHHTEFGFQNIEPVVHHPQDLKRWREERKRQSLPK
CCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCC
PPQQGYPQFVTDWWQQADFSGLQDALWWLGHASLLLRISGQAVLFDPVLSSRVSPVNFYG
CCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHEEEEECCCEEEECHHHHCCCCCCCCCC
PQRKTPIPASVQQLPDIDVIVISHNHYDHLDVTTITQLLRRFPDVVFLVPLGLKNWLRQH
CCCCCCCCHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHH
GARHVHELDWWDQRLVADFEFHCVPARHWSMRTPWDRNHSLWSGWVVKRGEVNFYFSGDT
CCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCEECEEEEECCEEEEECCCH
GYCQQLLDIGEALGPFNYAALPIGAYAPRWFMQAQHMDPQQSVQLFQKLHQPVTIPIHWG
HHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEECC
VFELADEPLDEPPEQLQQALTDAGVAHNKFVPIKIGARIILE
HHHHCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]