| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is yfaZ [H]
Identifier: 218928367
GI number: 218928367
Start: 1360997
End: 1361524
Strand: Direct
Name: yfaZ [H]
Synonym: YPO1208
Alternate gene names: 218928367
Gene position: 1360997-1361524 (Clockwise)
Preceding gene: 218928365
Following gene: 218928369
Centisome position: 29.25
GC content: 53.98
Gene sequence:
>528_bases GTGGCGTGTGCAGCCAGTCTGCTGTTGGTAGCCGGTTCTGCCAGTGCGGTGAGTTTTAACGCTGAAACTGGGCGTCATTA CACTAATTTAGGTTTTGGTCTGGGGACAAACACGGGCGGTTTGGCCATTAGTGGCAACTGGGCGCGCAGTGATCATGACG GCGATGTGCTGGGGCTTGGGCTGGGGTTTAATTTACCGGTTGGGCCAATGACCGCGACAGTGGGAGCCAAAGGGATTTAT ATGTCACCAGAAGACGGCAGCAGTGGCGGTGCGGTGGCGATTGGCGGTGGGCTAAGCTATCCGATCAACAAATCATTCAG CGTATACGGTGAGGGGTATTTCGCACCGGAAGAGTTGACCAGCGGTATGAAATCCTACAGCGAAGCCAATGGGGGTGTGC GTTGGAACGTATTCCGCCCGTTAACGGTTGATGTCGGTTACCGCTATATCAATATGGAAGGTAAAGAAGGCCGTCGAGAT AATCGTCTCGCTGATGGGGTGTATATCGGCGCTGGTCTGAACTTCTGA
Upstream 100 bases:
>100_bases GGTTTTTTTCGGGTAAACTCCGCACAGGAAAAACCATAAGCCTAAAATGGCTAATTGGTGACATAACGAACAATGAGAGA GCAATATGAATAAGCATTTA
Downstream 100 bases:
>100_bases TTACCCTTTTTTATCTGACGTTAGAGCGTTGTGCTTATAATTGCAGCGTTGTTCTTATAAATAAACGTTAGCGGTATTCA CTTACCCTCATTACTGACGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MACAASLLLVAGSASAVSFNAETGRHYTNLGFGLGTNTGGLAISGNWARSDHDGDVLGLGLGFNLPVGPMTATVGAKGIY MSPEDGSSGGAVAIGGGLSYPINKSFSVYGEGYFAPEELTSGMKSYSEANGGVRWNVFRPLTVDVGYRYINMEGKEGRRD NRLADGVYIGAGLNF
Sequences:
>Translated_175_residues MACAASLLLVAGSASAVSFNAETGRHYTNLGFGLGTNTGGLAISGNWARSDHDGDVLGLGLGFNLPVGPMTATVGAKGIY MSPEDGSSGGAVAIGGGLSYPINKSFSVYGEGYFAPEELTSGMKSYSEANGGVRWNVFRPLTVDVGYRYINMEGKEGRRD NRLADGVYIGAGLNF >Mature_174_residues ACAASLLLVAGSASAVSFNAETGRHYTNLGFGLGTNTGGLAISGNWARSDHDGDVLGLGLGFNLPVGPMTATVGAKGIYM SPEDGSSGGAVAIGGGLSYPINKSFSVYGEGYFAPEELTSGMKSYSEANGGVRWNVFRPLTVDVGYRYINMEGKEGRRDN RLADGVYIGAGLNF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082072, Length=175, Percent_Identity=51.4285714285714, Blast_Score=169, Evalue=1e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001702 - InterPro: IPR009998 [H]
Pfam domain/function: PF07437 YfaZ [H]
EC number: NA
Molecular weight: Translated: 18076; Mature: 17945
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MACAASLLLVAGSASAVSFNAETGRHYTNLGFGLGTNTGGLAISGNWARSDHDGDVLGLG CCCHHEEEEEECCCCEEEEECCCCCEEEECEEECCCCCCCEEEECCCCCCCCCCCEEEEE LGFNLPVGPMTATVGAKGIYMSPEDGSSGGAVAIGGGLSYPINKSFSVYGEGYFAPEELT CCCCCCCCCEEEECCCCEEEECCCCCCCCCEEEECCCCCCCCCCCEEEEECCEECHHHHH SGMKSYSEANGGVRWNVFRPLTVDVGYRYINMEGKEGRRDNRLADGVYIGAGLNF HHHHHHHHCCCCEEEEEEEEEEEECCEEEEEECCCCCCCCCCCCCCEEEECCCCC >Mature Secondary Structure ACAASLLLVAGSASAVSFNAETGRHYTNLGFGLGTNTGGLAISGNWARSDHDGDVLGLG CCHHEEEEEECCCCEEEEECCCCCEEEECEEECCCCCCCEEEECCCCCCCCCCCEEEEE LGFNLPVGPMTATVGAKGIYMSPEDGSSGGAVAIGGGLSYPINKSFSVYGEGYFAPEELT CCCCCCCCCEEEECCCCEEEECCCCCCCCCEEEECCCCCCCCCCCEEEEECCEECHHHHH SGMKSYSEANGGVRWNVFRPLTVDVGYRYINMEGKEGRRDNRLADGVYIGAGLNF HHHHHHHHCCCCEEEEEEEEEEEECCEEEEEECCCCCCCCCCCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]