| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218927624
Identifier: 218927624
GI number: 218927624
Start: 443157
End: 443504
Strand: Reverse
Name: 218927624
Synonym: YPO0423
Alternate gene names: NA
Gene position: 443504-443157 (Counterclockwise)
Preceding gene: 218927626
Following gene: 218927623
Centisome position: 9.53
GC content: 45.98
Gene sequence:
>348_bases TTGGCGGGGATGCTCCAGTTGGTTATGATCAGGTTATGGATAATAAAGGATTGCACCGGCGCATCGATTGCTGCGGGGCT AACGATGAGAAGACTGAACCCAACAAGTGAAATTGGGCAGCTAGAGACGTTAGCAACTCTACCTGAAAAATTGGCTGAGA GGGCAGCTCGCGCTCAAATATTCTCTCAAAACTGGCCTTCGGGTGATTTGGGGGCTGCAGTGAATAAGTTTGCAGGTAGC GATCTGTTTATTACAGTCACTAAATCAGGTAAACAAATTTATACGAATCCAACAACAGGGGTTCAGGTAGTTAGAGGATT TGTCAGGGAGTTATTTTCGCCTCCATGA
Upstream 100 bases:
>100_bases ACAATAGATATAAATAAACAAGTAAATTAAGCCATTAGTCATATATCTAACCATTATTTATAACGGCAATGTTGAGGGGT CCGTAAAACGGCTGAACAAC
Downstream 100 bases:
>100_bases CCCATCGTTACCTAGAAAAAGAACATACCTCGACCTTGATGGAAATATTCCAAATAATAAAATTTTGGAGACAGGGAAAC AGGTTGGTAGAACGCAAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MAGMLQLVMIRLWIIKDCTGASIAAGLTMRRLNPTSEIGQLETLATLPEKLAERAARAQIFSQNWPSGDLGAAVNKFAGS DLFITVTKSGKQIYTNPTTGVQVVRGFVRELFSPP
Sequences:
>Translated_115_residues MAGMLQLVMIRLWIIKDCTGASIAAGLTMRRLNPTSEIGQLETLATLPEKLAERAARAQIFSQNWPSGDLGAAVNKFAGS DLFITVTKSGKQIYTNPTTGVQVVRGFVRELFSPP >Mature_114_residues AGMLQLVMIRLWIIKDCTGASIAAGLTMRRLNPTSEIGQLETLATLPEKLAERAARAQIFSQNWPSGDLGAAVNKFAGSD LFITVTKSGKQIYTNPTTGVQVVRGFVRELFSPP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12452; Mature: 12320
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGMLQLVMIRLWIIKDCTGASIAAGLTMRRLNPTSEIGQLETLATLPEKLAERAARAQI CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FSQNWPSGDLGAAVNKFAGSDLFITVTKSGKQIYTNPTTGVQVVRGFVRELFSPP HHCCCCCCCHHHHHHHHCCCCEEEEEECCCCEEEECCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure AGMLQLVMIRLWIIKDCTGASIAAGLTMRRLNPTSEIGQLETLATLPEKLAERAARAQI CHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FSQNWPSGDLGAAVNKFAGSDLFITVTKSGKQIYTNPTTGVQVVRGFVRELFSPP HHCCCCCCCHHHHHHHHCCCCEEEEEECCCCEEEECCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA