Definition Yersinia pestis CO92 chromosome, complete genome.
Accession NC_003143
Length 4,653,728

Click here to switch to the map view.

The map label for this gene is 218927596

Identifier: 218927596

GI number: 218927596

Start: 411235

End: 411522

Strand: Reverse

Name: 218927596

Synonym: YPO0394

Alternate gene names: NA

Gene position: 411522-411235 (Counterclockwise)

Preceding gene: 218927600

Following gene: 218927588

Centisome position: 8.84

GC content: 53.82

Gene sequence:

>288_bases
ATGTTAACTGAAGACACGGCAGAGGCCAAAGGCTGGCTGTCCAGCGGTCAGCTGCGGGAGGACGTCTTTACCCTGCTGCG
TGTTTATCTGGGGTGTGATTACGATGCCAGCCTGACACTGACAATCCCGATGAATCTCGCACCGCTGCCACGTATGGGCG
ACCCCTTGCTGATGGCGGGGTATAACGTGATGCTGGGACTGCGTGAAGATAATCTGGATGAAAGGCCGGAGAAAGTGACG
ATGAAGTTGGGGCGGATTAGGGATAAGAGTAAACTTCAGAAGCACTAA

Upstream 100 bases:

>100_bases
AAAACAGGCGAGATTCTCGTTTTCAGAGTAGTAAAGGCTGGGGGATCATCTGGTCCTCGGCAGCGAAACTTCAGATGCTA
ACTACTTCATCGGGGTCGAA

Downstream 100 bases:

>100_bases
AAAAATAACCAACTGATTTTATTTAATCAAGAGATATTAAGGAATACCGAATACTAAATAGCATTCTAGAATGTGAAAGT
AAGTTCATTCTATAAAAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MLTEDTAEAKGWLSSGQLREDVFTLLRVYLGCDYDASLTLTIPMNLAPLPRMGDPLLMAGYNVMLGLREDNLDERPEKVT
MKLGRIRDKSKLQKH

Sequences:

>Translated_95_residues
MLTEDTAEAKGWLSSGQLREDVFTLLRVYLGCDYDASLTLTIPMNLAPLPRMGDPLLMAGYNVMLGLREDNLDERPEKVT
MKLGRIRDKSKLQKH
>Mature_95_residues
MLTEDTAEAKGWLSSGQLREDVFTLLRVYLGCDYDASLTLTIPMNLAPLPRMGDPLLMAGYNVMLGLREDNLDERPEKVT
MKLGRIRDKSKLQKH

Specific function: Unknown

COG id: COG3520

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10767; Mature: 10767

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
6.3 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTEDTAEAKGWLSSGQLREDVFTLLRVYLGCDYDASLTLTIPMNLAPLPRMGDPLLMAG
CCCCCCCCHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCEEEEC
YNVMLGLREDNLDERPEKVTMKLGRIRDKSKLQKH
CEEEEECCCCCCCCCHHHHHHHHHCCCCCHHHCCC
>Mature Secondary Structure
MLTEDTAEAKGWLSSGQLREDVFTLLRVYLGCDYDASLTLTIPMNLAPLPRMGDPLLMAG
CCCCCCCCHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCEEEEC
YNVMLGLREDNLDERPEKVTMKLGRIRDKSKLQKH
CEEEEECCCCCCCCCHHHHHHHHHCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA