| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
Click here to switch to the map view.
The map label for this gene is fepA [C]
Identifier: 218927375
GI number: 218927375
Start: 180906
End: 182966
Strand: Direct
Name: fepA [C]
Synonym: YPO0164
Alternate gene names: 218927375
Gene position: 180906-182966 (Clockwise)
Preceding gene: 218927373
Following gene: 218927378
Centisome position: 3.89
GC content: 50.51
Gene sequence:
>2061_bases ATGATATCTGGGAAAAATAAAGTCTGTAAAAAGAAGTTATTAGCGTGTGCGGTTACTTCGGCTATTTCTGCCTTTGCTTC AAATGCCATTGCTTCAAATGCCATTGCCGATACTACGAGTCTGGCTGCAATGAATCGCTCAGCCATTAATATATCAAGCA CGCATAACAGTAATAAAAAACTCAATGACGCTGATGTCATCACGGTAACAGCCCCTCTGTATTCGCCACTGGTGGTTGTC ACATCGCCTAAAGTGCCCCGCCAGCCAGTACCGGCCAGTGACGGTACTGATTATCTGAGGACCATTCCCGGTTTTTCACT TGTCCGTAACGGGGGGACCAATGGTGATGTGGTGTTCCGTGGCATGTTCGGCTCACGGCTAAAAATTCTGACCGATGGTG CTGAGATTTTGGGTACCTGCCCATCGCGAATGGATGCGCCAACCTCGTATATTTCACCAGAAAGTTTTGATCTACTCACG GTTGTCAAAGGGCCGCAATCGGTGCTGTGGGGGCCGGGGGTTTCTGCCGGGACCATTTTATTTGAACGGGAGCGCCCACA TTTTGACCAGTCTGGCGTCAAAGGTAATGCCAGTGTGTTAGCCGGTTCTAATGGGCGCTGGGATAAAAATCTTGATGCCA GTTTGGGTAACGAGCAGGGCTATCTGCGGATGATGGGGAATCAGTCTCGGGCTGCTGATTATAAAGACGGTAACAATGTT CGCGTGCCCTCTCAATGGGATAAGTGGAATGCGGATATGGCGTTGGGCTGGACACCCGATACCGATACATTACTTGAGCT GTCGGTAGGAAAAGGGAATGGTGAAGCCCGTTATGGCGGTCGCGGTATGGATGGTTCTCAGTTCCTGCGTGAGAGCCTGG CGGCCCGTGTTGAGAAAAGTAATATTGGCGAGGTGCTGGATAAAATCGAAGCCAAAATTAACTACACCTACGTAGACCAT ATTATGGATAACAAGACCTTACGTACCCCACCGATGATGGCGATGTCTAGCAATCTGGACCGGCGGATGCTCGGCGGTCG GGTCATGGGGACCTGGCTGTGGCAGGACCTAAAGCTGGACGCGGGTACCGATATGCAAACCAATACACACCGCAAGAATA AACAGGGGAACTGGGATAAAAACGCCCGTTTCATGAATAACGGGGTGTTCGGTGAGTTAACCTGGGCGGCAAGTGAACAA AATAAACTGATCAGCGGGGCGCGTCTTGACCGTCACCAAGTGACGAATTATACCCGCGCAGGTGAGCCGACGCGCTCTGC TACCCTCCCCGCTGCCTTTATGCGTGTTGAGCATAATCTGGCTAATGCACCGGTGATGTTGTATGCCGGCTTGGGGCATA CCGAGCGTTTTCCTGACTATTGGGAACTGTTTTCGCCAAAATTCGGGCCAGCAGGCTCTACTAGCGCCTTTGAGGGTGTA AAAAGCGAAAAAACCACGCAGATTGATATCGGTGGCCAATACAGCGGTGAACAATTTAGGGGGTGGCTCTCCGCTTATAT TGGCCGGGTTAATGATTTTATCCTGTTTAAATATGATCCAAAAAATCTACGCATCAGCCAGGCCGATAATATTAACGCAA CCATTATGGGCGGCGAGATGGGGATGGAATATGCCCTCACCCCGTATTGGAAGGCTGATGCCAGTCTGGCTTATGCCTGG GGGGAAAATACCCGTGATAACCGGCCATTGCCGCAAATTCCACCACTTGAGGCGCGGTTAGGGCTGACATTTGAAGCAGG CGACTGGAGCAGTTCCGCCTTATGGCGTTTGGTCAATAGCCAGCACCGGGTGGCGATCAACGAAGGGAATGTCGTCGGTA AAGATTTTTCCAGCAGTGCGGGGTTCGGCGTACTGTCGGCTAACGTCGCCTATAAGGTGAATAAGCAAGTGAAGTTAAGT AGCGGCATCGATAATTTGCTGAATAAGGCTTACAGCGAACATCTTAATCTGGCGGGTAATAGCGGTTTTGGTTATTCAGT TAATACCCCTCTGAATGAGCCTGGCCGCACTCTCTGGGCAAAGCTAAACCTAACATTCTAA
Upstream 100 bases:
>100_bases GATCCAATTATTCCTGATAGAAAGCGAAAAAATATAAAACCACTTTTCTGGTATGGGTAAATATCCCGCCGGAACAATGT GTATTGCCTAAGGGGAAGTA
Downstream 100 bases:
>100_bases GGGGCTGAATGCGCTAGCAGAACGTGGCAGGCGATGGCTTGCCACGTTAATAACAATTAATACCAATAACAATTAACACC AACACCAACACCAACACCAA
Product: putative membrane receptor protein
Products: NA
Alternate protein names: NB-Dependent Receptor; NB Dependent Receptor; Outer Membrane Copper Receptor; NB-Dependent Receptor Protein; Outer Membrane Copper Receptor OprC; Outer Membrane Protein C; Nb-Dependent Receptor; Outer Membrane Protein OprC; Outer Membrane Receptor Protein; NB-Dependent Receptor Plug Domain-Containing; Outer Membrane Insertion C-Terminal Signal; NB-Dependent Outer Membrane Receptor; Outer Membrane Protein Nosa; Outer Membrane Protein; Outer Membrane Receptor Protein Mostly Fe Transport; NosA Protein; NB-Dependent Copper Receptor Protein; Membrane Receptor Protein; B12 Family nB-Dependent Receptor; NB-Dependent Receptor Domain Protein; Outer Membrane Receptor Proteins; Nb-Dependent Copper Receptor; Outer Membrane Protein OprC Complement; N-B Dependent Receptor
Number of amino acids: Translated: 686; Mature: 686
Protein sequence:
>686_residues MISGKNKVCKKKLLACAVTSAISAFASNAIASNAIADTTSLAAMNRSAINISSTHNSNKKLNDADVITVTAPLYSPLVVV TSPKVPRQPVPASDGTDYLRTIPGFSLVRNGGTNGDVVFRGMFGSRLKILTDGAEILGTCPSRMDAPTSYISPESFDLLT VVKGPQSVLWGPGVSAGTILFERERPHFDQSGVKGNASVLAGSNGRWDKNLDASLGNEQGYLRMMGNQSRAADYKDGNNV RVPSQWDKWNADMALGWTPDTDTLLELSVGKGNGEARYGGRGMDGSQFLRESLAARVEKSNIGEVLDKIEAKINYTYVDH IMDNKTLRTPPMMAMSSNLDRRMLGGRVMGTWLWQDLKLDAGTDMQTNTHRKNKQGNWDKNARFMNNGVFGELTWAASEQ NKLISGARLDRHQVTNYTRAGEPTRSATLPAAFMRVEHNLANAPVMLYAGLGHTERFPDYWELFSPKFGPAGSTSAFEGV KSEKTTQIDIGGQYSGEQFRGWLSAYIGRVNDFILFKYDPKNLRISQADNINATIMGGEMGMEYALTPYWKADASLAYAW GENTRDNRPLPQIPPLEARLGLTFEAGDWSSSALWRLVNSQHRVAINEGNVVGKDFSSSAGFGVLSANVAYKVNKQVKLS SGIDNLLNKAYSEHLNLAGNSGFGYSVNTPLNEPGRTLWAKLNLTF
Sequences:
>Translated_686_residues MISGKNKVCKKKLLACAVTSAISAFASNAIASNAIADTTSLAAMNRSAINISSTHNSNKKLNDADVITVTAPLYSPLVVV TSPKVPRQPVPASDGTDYLRTIPGFSLVRNGGTNGDVVFRGMFGSRLKILTDGAEILGTCPSRMDAPTSYISPESFDLLT VVKGPQSVLWGPGVSAGTILFERERPHFDQSGVKGNASVLAGSNGRWDKNLDASLGNEQGYLRMMGNQSRAADYKDGNNV RVPSQWDKWNADMALGWTPDTDTLLELSVGKGNGEARYGGRGMDGSQFLRESLAARVEKSNIGEVLDKIEAKINYTYVDH IMDNKTLRTPPMMAMSSNLDRRMLGGRVMGTWLWQDLKLDAGTDMQTNTHRKNKQGNWDKNARFMNNGVFGELTWAASEQ NKLISGARLDRHQVTNYTRAGEPTRSATLPAAFMRVEHNLANAPVMLYAGLGHTERFPDYWELFSPKFGPAGSTSAFEGV KSEKTTQIDIGGQYSGEQFRGWLSAYIGRVNDFILFKYDPKNLRISQADNINATIMGGEMGMEYALTPYWKADASLAYAW GENTRDNRPLPQIPPLEARLGLTFEAGDWSSSALWRLVNSQHRVAINEGNVVGKDFSSSAGFGVLSANVAYKVNKQVKLS SGIDNLLNKAYSEHLNLAGNSGFGYSVNTPLNEPGRTLWAKLNLTF >Mature_686_residues MISGKNKVCKKKLLACAVTSAISAFASNAIASNAIADTTSLAAMNRSAINISSTHNSNKKLNDADVITVTAPLYSPLVVV TSPKVPRQPVPASDGTDYLRTIPGFSLVRNGGTNGDVVFRGMFGSRLKILTDGAEILGTCPSRMDAPTSYISPESFDLLT VVKGPQSVLWGPGVSAGTILFERERPHFDQSGVKGNASVLAGSNGRWDKNLDASLGNEQGYLRMMGNQSRAADYKDGNNV RVPSQWDKWNADMALGWTPDTDTLLELSVGKGNGEARYGGRGMDGSQFLRESLAARVEKSNIGEVLDKIEAKINYTYVDH IMDNKTLRTPPMMAMSSNLDRRMLGGRVMGTWLWQDLKLDAGTDMQTNTHRKNKQGNWDKNARFMNNGVFGELTWAASEQ NKLISGARLDRHQVTNYTRAGEPTRSATLPAAFMRVEHNLANAPVMLYAGLGHTERFPDYWELFSPKFGPAGSTSAFEGV KSEKTTQIDIGGQYSGEQFRGWLSAYIGRVNDFILFKYDPKNLRISQADNINATIMGGEMGMEYALTPYWKADASLAYAW GENTRDNRPLPQIPPLEARLGLTFEAGDWSSSALWRLVNSQHRVAINEGNVVGKDFSSSAGFGVLSANVAYKVNKQVKLS SGIDNLLNKAYSEHLNLAGNSGFGYSVNTPLNEPGRTLWAKLNLTF
Specific function: This Protein Is Involved In The Initial Step Of Iron Uptake By Binding Ferrienterobactin (Fe-Ent), An Iron Chelatin Siderophore That Allows E.Coli To Extract Iron From The Environment. Fepa Also Acts As A Receptor For Colicins B And D. [C]
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Integral Membrane Protein. Outer Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74895; Mature: 74895
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISGKNKVCKKKLLACAVTSAISAFASNAIASNAIADTTSLAAMNRSAINISSTHNSNKK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCHHHHHHHCCCEEEEECCCCCCCC LNDADVITVTAPLYSPLVVVTSPKVPRQPVPASDGTDYLRTIPGFSLVRNGGTNGDVVFR CCCCCEEEEECCCCCCEEEEECCCCCCCCCCCCCCCHHHHHCCCHHHEECCCCCCCEEEE GMFGSRLKILTDGAEILGTCPSRMDAPTSYISPESFDLLTVVKGPQSVLWGPGVSAGTIL ECCCCEEEEEECCHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEECCCCCCCEEE FERERPHFDQSGVKGNASVLAGSNGRWDKNLDASLGNEQGYLRMMGNQSRAADYKDGNNV EECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCE RVPSQWDKWNADMALGWTPDTDTLLELSVGKGNGEARYGGRGMDGSQFLRESLAARVEKS ECCCCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH NIGEVLDKIEAKINYTYVDHIMDNKTLRTPPMMAMSSNLDRRMLGGRVMGTWLWQDLKLD HHHHHHHHHHHHEEEEEEHHHHCCCCCCCCCCHHHHCCCCHHHHCCEEEEEHHHEEEEEC AGTDMQTNTHRKNKQGNWDKNARFMNNGVFGELTWAASEQNKLISGARLDRHQVTNYTRA CCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCCCCCCCHHHHCCCCCC GEPTRSATLPAAFMRVEHNLANAPVMLYAGLGHTERFPDYWELFSPKFGPAGSTSAFEGV CCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHCCCCCCCCCCHHHCCC KSEKTTQIDIGGQYSGEQFRGWLSAYIGRVNDFILFKYDPKNLRISQADNINATIMGGEM CCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEECCCCCEEEEEECCC GMEYALTPYWKADASLAYAWGENTRDNRPLPQIPPLEARLGLTFEAGDWSSSALWRLVNS CCCEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHEEEEEECCCCCHHHHHHHHCC QHRVAINEGNVVGKDFSSSAGFGVLSANVAYKVNKQVKLSSGIDNLLNKAYSEHLNLAGN CCEEEEECCCEECCCCCCCCCCEEEECCEEEEECCEEEECCCHHHHHHHHHHHHCCCCCC SGFGYSVNTPLNEPGRTLWAKLNLTF CCCCEEECCCCCCCCCEEEEEEEECC >Mature Secondary Structure MISGKNKVCKKKLLACAVTSAISAFASNAIASNAIADTTSLAAMNRSAINISSTHNSNKK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCHHHHHHHCCCEEEEECCCCCCCC LNDADVITVTAPLYSPLVVVTSPKVPRQPVPASDGTDYLRTIPGFSLVRNGGTNGDVVFR CCCCCEEEEECCCCCCEEEEECCCCCCCCCCCCCCCHHHHHCCCHHHEECCCCCCCEEEE GMFGSRLKILTDGAEILGTCPSRMDAPTSYISPESFDLLTVVKGPQSVLWGPGVSAGTIL ECCCCEEEEEECCHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEECCCCCCCEEE FERERPHFDQSGVKGNASVLAGSNGRWDKNLDASLGNEQGYLRMMGNQSRAADYKDGNNV EECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCE RVPSQWDKWNADMALGWTPDTDTLLELSVGKGNGEARYGGRGMDGSQFLRESLAARVEKS ECCCCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH NIGEVLDKIEAKINYTYVDHIMDNKTLRTPPMMAMSSNLDRRMLGGRVMGTWLWQDLKLD HHHHHHHHHHHHEEEEEEHHHHCCCCCCCCCCHHHHCCCCHHHHCCEEEEEHHHEEEEEC AGTDMQTNTHRKNKQGNWDKNARFMNNGVFGELTWAASEQNKLISGARLDRHQVTNYTRA CCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCCCCCCCHHHHCCCCCC GEPTRSATLPAAFMRVEHNLANAPVMLYAGLGHTERFPDYWELFSPKFGPAGSTSAFEGV CCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHCCCCCCCCCCHHHCCC KSEKTTQIDIGGQYSGEQFRGWLSAYIGRVNDFILFKYDPKNLRISQADNINATIMGGEM CCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEECCCCCEEEEEECCC GMEYALTPYWKADASLAYAWGENTRDNRPLPQIPPLEARLGLTFEAGDWSSSALWRLVNS CCCEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHEEEEEECCCCCHHHHHHHHCC QHRVAINEGNVVGKDFSSSAGFGVLSANVAYKVNKQVKLSSGIDNLLNKAYSEHLNLAGN CCEEEEECCCEECCCCCCCCCCEEEECCEEEEECCEEEECCCHHHHHHHHHHHHCCCCCC SGFGYSVNTPLNEPGRTLWAKLNLTF CCCCEEECCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA