Click here to switch to the map view.

The map label for this gene is 218906494

Identifier: 218906494

GI number: 218906494

Start: 5107523

End: 5108128

Strand: Reverse

Name: 218906494

Synonym: BCAH820_5408

Alternate gene names: NA

Gene position: 5108128-5107523 (Counterclockwise)

Preceding gene: 218906495

Following gene: 218906493

Centisome position: 96.33

GC content: 39.93

Gene sequence:

>606_bases
TTGGTGAAACAACCTGTGAAAGGAAGAGGCGTAATGACAGAAATCGTAAAGGTAAGAGAACAGCTACAAATTTCGCTTTC
TGATTTCCAAGAACAAGCTTCATTACAAAGTGGTCAAATTTTTGTAGTGGGGTGTAGTACGAGCGAAGTGCTAGGAGAAA
GAATTGGGACATCAGGAACGATGGAAGTAGCAGAGGCGATTTTTTCTGAGTTAAAACAATTTCAAGAACAAACAGGTATT
GAGTTGGCGTTTCAATGTTGTGAGCATTTAAATCGTGCTTTAGTAGTTGAGAGAGAGTTAGCGATGAAATATCAATTTGA
AATTGTAACAGTTACGCCTGTTAGATCAGCAGGTGGTGCATTAGCAACATATGCTTATCACAATTTGAAAGATCCGGTAG
TAATTGAGTTTATTAAAGCAGATGCGGGAATGGATATTGGTGATACATTTATCGGTATGCATTTAAAGCACGTAGCTGTT
CCGGTTCGTACTAGTGTGAAGGAAATTGGAAGTGCACATGTAACGATGGCAACAACACGTGGAAAACTAATTGGTGGAGC
ACGTGCTGTTTATGCGGCGAAGGAAGAGACTATCACTTGCCGTTAA

Upstream 100 bases:

>100_bases
AACTGAATTTGAAGGTGGCCGTCACGAAAACCGCGTAGGAAAAATTAAAACATACGAAGCAAAGTAATAGATTCTAACTA
GAAGCAGTAGGAAATATAAT

Downstream 100 bases:

>100_bases
AGTTACGAATAAGGTATGTTGTCTGACTTTATCATAGAAGAAAGAAAAGACCGATTTTCGGTCTTTTTTTTCTTTTATGA
TATAGAAAGTCATGTTAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MVKQPVKGRGVMTEIVKVREQLQISLSDFQEQASLQSGQIFVVGCSTSEVLGERIGTSGTMEVAEAIFSELKQFQEQTGI
ELAFQCCEHLNRALVVERELAMKYQFEIVTVTPVRSAGGALATYAYHNLKDPVVIEFIKADAGMDIGDTFIGMHLKHVAV
PVRTSVKEIGSAHVTMATTRGKLIGGARAVYAAKEETITCR

Sequences:

>Translated_201_residues
MVKQPVKGRGVMTEIVKVREQLQISLSDFQEQASLQSGQIFVVGCSTSEVLGERIGTSGTMEVAEAIFSELKQFQEQTGI
ELAFQCCEHLNRALVVERELAMKYQFEIVTVTPVRSAGGALATYAYHNLKDPVVIEFIKADAGMDIGDTFIGMHLKHVAV
PVRTSVKEIGSAHVTMATTRGKLIGGARAVYAAKEETITCR
>Mature_201_residues
MVKQPVKGRGVMTEIVKVREQLQISLSDFQEQASLQSGQIFVVGCSTSEVLGERIGTSGTMEVAEAIFSELKQFQEQTGI
ELAFQCCEHLNRALVVERELAMKYQFEIVTVTPVRSAGGALATYAYHNLKDPVVIEFIKADAGMDIGDTFIGMHLKHVAV
PVRTSVKEIGSAHVTMATTRGKLIGGARAVYAAKEETITCR

Specific function: Unknown

COG id: COG4475

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0340 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006340
- ProDom:   PD102102 [H]

Pfam domain/function: PF04260 DUF436 [H]

EC number: NA

Molecular weight: Translated: 21922; Mature: 21922

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKQPVKGRGVMTEIVKVREQLQISLSDFQEQASLQSGQIFVVGCSTSEVLGERIGTSGT
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHCCCCCH
MEVAEAIFSELKQFQEQTGIELAFQCCEHLNRALVVERELAMKYQFEIVTVTPVRSAGGA
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHEEHHHHHHEEEEEEEEEEEECCCCCCH
LATYAYHNLKDPVVIEFIKADAGMDIGDTFIGMHLKHVAVPVRTSVKEIGSAHVTMATTR
HHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC
GKLIGGARAVYAAKEETITCR
CCCCCCHHHEEECCCCEEECC
>Mature Secondary Structure
MVKQPVKGRGVMTEIVKVREQLQISLSDFQEQASLQSGQIFVVGCSTSEVLGERIGTSGT
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHCCCCCH
MEVAEAIFSELKQFQEQTGIELAFQCCEHLNRALVVERELAMKYQFEIVTVTPVRSAGGA
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHEEHHHHHHEEEEEEEEEEEECCCCCCH
LATYAYHNLKDPVVIEFIKADAGMDIGDTFIGMHLKHVAVPVRTSVKEIGSAHVTMATTR
HHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC
GKLIGGARAVYAAKEETITCR
CCCCCCHHHEEECCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA