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The map label for this gene is lytR [H]

Identifier: 218906441

GI number: 218906441

Start: 5052828

End: 5053739

Strand: Reverse

Name: lytR [H]

Synonym: BCAH820_5355

Alternate gene names: 218906441

Gene position: 5053739-5052828 (Counterclockwise)

Preceding gene: 218906442

Following gene: 218906440

Centisome position: 95.31

GC content: 35.2

Gene sequence:

>912_bases
ATGAAAAAGAAAATTTTATTTTGGGTACTCGGTATCCTTGGGGTACTAATTATAGGTGGAGGAATTTATGCTTATAATGT
ATATTCTTCTGTATCTAATACATTAAAGGAAGTTCATCAACCTTTAAAACGTGATCAAAACAACAGCAATGTTGGAGAAA
AAGTTAGTAAGAGTGAACCAGTTTCAATTTTACTACTAGGAGCAGATGAGCGCGGTGATGATAAAGGGCGTTCAGATTCT
TTAATGGTGATTACATTAAATCCTAAAAATAACTCTATGAAAACAGTAAGTATTCCTCGTGATACTTATACAGAAATTGT
TGGAAAAGGTAAAAGTGATAAAATCAATCATGCTTATGCATTCGGCGGAGTAGATATGTCTGTAGCGACAGTAGAAAAGT
TCTTGGATGTTCCTATTAATTATTATATTGAAGTGAACATGGAAGGCTTTAAAGATATCGTTGATGCAGTCGGTGGTGTA
GATGTAACTAATGATTTAGAATTTACGCAGGATGGACATCATTTTGCGAAAGGAAATATTCATTTAACAGGTGACCAAGC
TCTAGCATTCACACGTATGCGTAAACAAGACCCACGTGGTGACTTTGGTCGTCAGATGCGTCAACGTCAAGTGATGCAAG
GTGTTATCAAAAAAGGTGCAAGCTTCTCTTCTTTAACAGGTTATGGAGATGTATTAGCAGCAATTCAAAAGAATGTGAAG
ACAAACTTAACGCAAGATCAAATGTTTGATATGCAAAAGAACTATAAAGATTGCTTGAAAAATAGTGAAGATATTCAAAT
CCCAGGTGACGGTCATAAGGCTGCTGATGGCATTTGGTATTACTATGTTCCAGATGCAGCAAAACAAGATTTAACGAATA
AATTAAGATCGCATCTTGAAGTGACTAAGTAA

Upstream 100 bases:

>100_bases
TTTTAATTTATCTTTTATTTTTAATCAAGAATAATGTAATATAGTGAGGAGTATAAAAATAGATATATTATTTTTAAATT
TTGATAAAGAGGGTAAAGGT

Downstream 100 bases:

>100_bases
TGATTCAACTTCTTTAGATAAAGTGCTAAAGGCCACGAAGTTTGGGTACAATATGTAACGGATTATTTCGTTGCGAAGTA
ATAAAGGTACACAAAAGGTA

Product: membrane-bound transcriptional regulator LytR

Products: NA

Alternate protein names: Membrane-bound protein lytR [H]

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MKKKILFWVLGILGVLIIGGGIYAYNVYSSVSNTLKEVHQPLKRDQNNSNVGEKVSKSEPVSILLLGADERGDDKGRSDS
LMVITLNPKNNSMKTVSIPRDTYTEIVGKGKSDKINHAYAFGGVDMSVATVEKFLDVPINYYIEVNMEGFKDIVDAVGGV
DVTNDLEFTQDGHHFAKGNIHLTGDQALAFTRMRKQDPRGDFGRQMRQRQVMQGVIKKGASFSSLTGYGDVLAAIQKNVK
TNLTQDQMFDMQKNYKDCLKNSEDIQIPGDGHKAADGIWYYYVPDAAKQDLTNKLRSHLEVTK

Sequences:

>Translated_303_residues
MKKKILFWVLGILGVLIIGGGIYAYNVYSSVSNTLKEVHQPLKRDQNNSNVGEKVSKSEPVSILLLGADERGDDKGRSDS
LMVITLNPKNNSMKTVSIPRDTYTEIVGKGKSDKINHAYAFGGVDMSVATVEKFLDVPINYYIEVNMEGFKDIVDAVGGV
DVTNDLEFTQDGHHFAKGNIHLTGDQALAFTRMRKQDPRGDFGRQMRQRQVMQGVIKKGASFSSLTGYGDVLAAIQKNVK
TNLTQDQMFDMQKNYKDCLKNSEDIQIPGDGHKAADGIWYYYVPDAAKQDLTNKLRSHLEVTK
>Mature_303_residues
MKKKILFWVLGILGVLIIGGGIYAYNVYSSVSNTLKEVHQPLKRDQNNSNVGEKVSKSEPVSILLLGADERGDDKGRSDS
LMVITLNPKNNSMKTVSIPRDTYTEIVGKGKSDKINHAYAFGGVDMSVATVEKFLDVPINYYIEVNMEGFKDIVDAVGGV
DVTNDLEFTQDGHHFAKGNIHLTGDQALAFTRMRKQDPRGDFGRQMRQRQVMQGVIKKGASFSSLTGYGDVLAAIQKNVK
TNLTQDQMFDMQKNYKDCLKNSEDIQIPGDGHKAADGIWYYYVPDAAKQDLTNKLRSHLEVTK

Specific function: Attenuator role for operon expression [H]

COG id: COG1316

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LytR/CpsA/Psr regulatory protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004474 [H]

Pfam domain/function: PF03816 LytR_cpsA_psr [H]

EC number: NA

Molecular weight: Translated: 33704; Mature: 33704

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKILFWVLGILGVLIIGGGIYAYNVYSSVSNTLKEVHQPLKRDQNNSNVGEKVSKSEP
CCCHHHHHHHHHHHHHHHCCCHHEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCC
VSILLLGADERGDDKGRSDSLMVITLNPKNNSMKTVSIPRDTYTEIVGKGKSDKINHAYA
EEEEEEECCCCCCCCCCCCCEEEEEECCCCCCEEEEECCHHHHHHHHCCCCCCCCCEEEE
FGGVDMSVATVEKFLDVPINYYIEVNMEGFKDIVDAVGGVDVTNDLEFTQDGHHFAKGNI
ECCCCHHHHHHHHHHCCCEEEEEEEECHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCE
HLTGDQALAFTRMRKQDPRGDFGRQMRQRQVMQGVIKKGASFSSLTGYGDVLAAIQKNVK
EEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
TNLTQDQMFDMQKNYKDCLKNSEDIQIPGDGHKAADGIWYYYVPDAAKQDLTNKLRSHLE
CCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHC
VTK
CCC
>Mature Secondary Structure
MKKKILFWVLGILGVLIIGGGIYAYNVYSSVSNTLKEVHQPLKRDQNNSNVGEKVSKSEP
CCCHHHHHHHHHHHHHHHCCCHHEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCC
VSILLLGADERGDDKGRSDSLMVITLNPKNNSMKTVSIPRDTYTEIVGKGKSDKINHAYA
EEEEEEECCCCCCCCCCCCCEEEEEECCCCCCEEEEECCHHHHHHHHCCCCCCCCCEEEE
FGGVDMSVATVEKFLDVPINYYIEVNMEGFKDIVDAVGGVDVTNDLEFTQDGHHFAKGNI
ECCCCHHHHHHHHHHCCCEEEEEEEECHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCE
HLTGDQALAFTRMRKQDPRGDFGRQMRQRQVMQGVIKKGASFSSLTGYGDVLAAIQKNVK
EEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
TNLTQDQMFDMQKNYKDCLKNSEDIQIPGDGHKAADGIWYYYVPDAAKQDLTNKLRSHLE
CCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHC
VTK
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA