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The map label for this gene is cccB [H]

Identifier: 218906360

GI number: 218906360

Start: 4967669

End: 4967992

Strand: Reverse

Name: cccB [H]

Synonym: BCAH820_5273

Alternate gene names: 218906360

Gene position: 4967992-4967669 (Counterclockwise)

Preceding gene: 218906361

Following gene: 218906359

Centisome position: 93.69

GC content: 39.81

Gene sequence:

>324_bases
GTGAAAAAGAAATTGTTGGCTATTGCGCTAGGAACATCAGTCGTTTTTGCTTTAGGAGCATGTGGAAATAAAGAAGAGAG
TAAGCCTTCAAAACAATCTGCAAGCACAGATAGCGCAGAGCAAATTTATCAAAAAAGTTGTATAGGGTGTCATGCGAAAG
ATTTATCCGGAGCAACTGGACCGGATTTACGAAAAGTAGGACAGAAATATGATGCGGCAGACATTGAAAAGATTATTGAA
AAAGGTCGCGGTTCTATGTCACCAGGAATCATCCAAGGTGAGGATGCGAAAAAAGTAGCTGAGTGGTTAGCTGAACATAA
ATAA

Upstream 100 bases:

>100_bases
ATATGAAATATACCTTAGTTTTTCTATATAAAGATAATGCTTATAATGAAAATGAGTGTGTTAGGAATGAAAAGAATATC
AACAATGGGGAGCGATAGAA

Downstream 100 bases:

>100_bases
AAGGCATAAAATGGACGAGTTGATTCATATAGTCAACTCGTTTCCCTTTTTTTGGAATGTAACATAACTGTAACAAAAAT
GTATCCGAATTGGAAACCGT

Product: cytochrome c-551

Products: NA

Alternate protein names: Cytochrome c551 [H]

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MKKKLLAIALGTSVVFALGACGNKEESKPSKQSASTDSAEQIYQKSCIGCHAKDLSGATGPDLRKVGQKYDAADIEKIIE
KGRGSMSPGIIQGEDAKKVAEWLAEHK

Sequences:

>Translated_107_residues
MKKKLLAIALGTSVVFALGACGNKEESKPSKQSASTDSAEQIYQKSCIGCHAKDLSGATGPDLRKVGQKYDAADIEKIIE
KGRGSMSPGIIQGEDAKKVAEWLAEHK
>Mature_107_residues
MKKKLLAIALGTSVVFALGACGNKEESKPSKQSASTDSAEQIYQKSCIGCHAKDLSGATGPDLRKVGQKYDAADIEKIIE
KGRGSMSPGIIQGEDAKKVAEWLAEHK

Specific function: Appears to mediate electron flow from the cytochrome b6f complex to an alternative terminal oxidase [H]

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012218
- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 11348; Mature: 11348

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKLLAIALGTSVVFALGACGNKEESKPSKQSASTDSAEQIYQKSCIGCHAKDLSGATG
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC
PDLRKVGQKYDAADIEKIIEKGRGSMSPGIIQGEDAKKVAEWLAEHK
HHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MKKKLLAIALGTSVVFALGACGNKEESKPSKQSASTDSAEQIYQKSCIGCHAKDLSGATG
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC
PDLRKVGQKYDAADIEKIIEKGRGSMSPGIIQGEDAKKVAEWLAEHK
HHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7916623 [H]