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The map label for this gene is swrAB [H]

Identifier: 218906356

GI number: 218906356

Start: 4962964

End: 4964148

Strand: Reverse

Name: swrAB [H]

Synonym: BCAH820_5269

Alternate gene names: 218906356

Gene position: 4964148-4962964 (Counterclockwise)

Preceding gene: 218906357

Following gene: 218906355

Centisome position: 93.62

GC content: 39.92

Gene sequence:

>1185_bases
GTGGAGGCATGGATTTTTGAAATAATGCGGGCAGTTGGACGTTTTTTCTTACACCCTGCTGTCTATGTATTTTTAATAAG
TAGTATATTCGTTGGATACTTACGTATGTTACGAGAACGAAAAGATTTTTCTTTTAAAGTTTATGATATTTGGTTTGAAC
TGCGAACAGCTTTATTTGCGGGGATTGGGTATGGATTAGTAGTATCTATTATTACGATTGGGCTCGGACTTGTCGTTTCT
AAAGCGAGCTTATGGGCCATTTTACTTTGGACATTACTATTTGGATTAACTGCTATGTACCGATATTTATCAGCAGCTTA
TACGTTTAGTATCGCGATTGTATGTGTTCTATTATCTTCTAAGCTACCAGTTTCCTTCTTACAGCTTGGGGAAGGTGAAG
AGAATACAATTGTGTCCCTTGCTATTTTGCTAGGCATTATGCTCGTTGTAGAGGGCTTGTTGATTTCTAAAAATGCAGTA
GGATATTCGACTCCGAAGATTAGGAAGGGTAAGCGTGGACTAAAGATTGGTTTACACGAATCAAAGCGTTTATGGATCAT
TCCTATTTTTATTCTCGTACCAGGTGACGCAGTAACGCAGTTTATTTCATGGTGGCCTGTCGTTTCAATCGGTTCTGATA
CATATTCCCTATTCCTCGTTCCATTTTTAATTGGATTTATGAGAAGGATTAGAAGTTATGAGCCGACGGAAGCTTTATTA
TTTACAGGAAGACGTGTGTACGGATTAGCAGGACTTGTACTCGTTTTAGGAATCGCAAGTTATTGGTGGCACGTGCTTGC
AATTATCGCAATGGGTGTTGCGATGCTTGGACGATTCACGATTTCCATGCAAGAGAAGATTTCTGATGAGACAAGACCAG
CATATTTCGCTGCACGTAATGATGGACTCGTTGTATTAGATACAATCCCGAATACAATTGGGGCAGAGCTGAATTTACTA
CCCGGAGAAATGATTACGAAAGTAAATGGAGTCATTCCAAGAAGCGCTGAGGAATTTTATGATGCGCTTCAAACGAAGAC
GACAGGAGCATTTTGTAAATTAGAAGTATTAGATACAAATGGTGAGCTTCGCCTTGCTCAAACGGCATTATACGCCGGAG
GACATCATGAACTAGGTATTGTATTTGTTCAGCAGGAGCATGAGTGGGATTCGGAAGCGATGTAA

Upstream 100 bases:

>100_bases
CAGGCAGTTTGCTGCCTGTATTTTTTTGTGTTAAACAAACGCTTGTCCAGTTATGATAATATAAAAAGAAAGAATGATAT
AAATGGTGGTGAATGGGTTC

Downstream 100 bases:

>100_bases
TAGAAGTGAGGGTGTCACCTTGAGGTGACACCCTTTTTTGTTGGGGGGCGGAGGAAGGTAGTTAGTAAATGAAATTTATA
TCGGCGATTTTCCGAATATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MEAWIFEIMRAVGRFFLHPAVYVFLISSIFVGYLRMLRERKDFSFKVYDIWFELRTALFAGIGYGLVVSIITIGLGLVVS
KASLWAILLWTLLFGLTAMYRYLSAAYTFSIAIVCVLLSSKLPVSFLQLGEGEENTIVSLAILLGIMLVVEGLLISKNAV
GYSTPKIRKGKRGLKIGLHESKRLWIIPIFILVPGDAVTQFISWWPVVSIGSDTYSLFLVPFLIGFMRRIRSYEPTEALL
FTGRRVYGLAGLVLVLGIASYWWHVLAIIAMGVAMLGRFTISMQEKISDETRPAYFAARNDGLVVLDTIPNTIGAELNLL
PGEMITKVNGVIPRSAEEFYDALQTKTTGAFCKLEVLDTNGELRLAQTALYAGGHHELGIVFVQQEHEWDSEAM

Sequences:

>Translated_394_residues
MEAWIFEIMRAVGRFFLHPAVYVFLISSIFVGYLRMLRERKDFSFKVYDIWFELRTALFAGIGYGLVVSIITIGLGLVVS
KASLWAILLWTLLFGLTAMYRYLSAAYTFSIAIVCVLLSSKLPVSFLQLGEGEENTIVSLAILLGIMLVVEGLLISKNAV
GYSTPKIRKGKRGLKIGLHESKRLWIIPIFILVPGDAVTQFISWWPVVSIGSDTYSLFLVPFLIGFMRRIRSYEPTEALL
FTGRRVYGLAGLVLVLGIASYWWHVLAIIAMGVAMLGRFTISMQEKISDETRPAYFAARNDGLVVLDTIPNTIGAELNLL
PGEMITKVNGVIPRSAEEFYDALQTKTTGAFCKLEVLDTNGELRLAQTALYAGGHHELGIVFVQQEHEWDSEAM
>Mature_394_residues
MEAWIFEIMRAVGRFFLHPAVYVFLISSIFVGYLRMLRERKDFSFKVYDIWFELRTALFAGIGYGLVVSIITIGLGLVVS
KASLWAILLWTLLFGLTAMYRYLSAAYTFSIAIVCVLLSSKLPVSFLQLGEGEENTIVSLAILLGIMLVVEGLLISKNAV
GYSTPKIRKGKRGLKIGLHESKRLWIIPIFILVPGDAVTQFISWWPVVSIGSDTYSLFLVPFLIGFMRRIRSYEPTEALL
FTGRRVYGLAGLVLVLGIASYWWHVLAIIAMGVAMLGRFTISMQEKISDETRPAYFAARNDGLVVLDTIPNTIGAELNLL
PGEMITKVNGVIPRSAEEFYDALQTKTTGAFCKLEVLDTNGELRLAQTALYAGGHHELGIVFVQQEHEWDSEAM

Specific function: Required for surface-adhering cells to differentiate into hyperflagellated and elongated swarm cells [H]

COG id: COG0265

COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43985; Mature: 43985

Theoretical pI: Translated: 8.17; Mature: 8.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAWIFEIMRAVGRFFLHPAVYVFLISSIFVGYLRMLRERKDFSFKVYDIWFELRTALFA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHH
GIGYGLVVSIITIGLGLVVSKASLWAILLWTLLFGLTAMYRYLSAAYTFSIAIVCVLLSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KLPVSFLQLGEGEENTIVSLAILLGIMLVVEGLLISKNAVGYSTPKIRKGKRGLKIGLHE
CCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCC
SKRLWIIPIFILVPGDAVTQFISWWPVVSIGSDTYSLFLVPFLIGFMRRIRSYEPTEALL
CCEEEEEEEEEEECCHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHH
FTGRRVYGLAGLVLVLGIASYWWHVLAIIAMGVAMLGRFTISMQEKISDETRPAYFAARN
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECC
DGLVVLDTIPNTIGAELNLLPGEMITKVNGVIPRSAEEFYDALQTKTTGAFCKLEVLDTN
CCEEEEECCCCCCCCCEECCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEEEEECC
GELRLAQTALYAGGHHELGIVFVQQEHEWDSEAM
CCEEEEHHHHHCCCCCCEEEEEEEECCCCCCCCC
>Mature Secondary Structure
MEAWIFEIMRAVGRFFLHPAVYVFLISSIFVGYLRMLRERKDFSFKVYDIWFELRTALFA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHH
GIGYGLVVSIITIGLGLVVSKASLWAILLWTLLFGLTAMYRYLSAAYTFSIAIVCVLLSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KLPVSFLQLGEGEENTIVSLAILLGIMLVVEGLLISKNAVGYSTPKIRKGKRGLKIGLHE
CCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCC
SKRLWIIPIFILVPGDAVTQFISWWPVVSIGSDTYSLFLVPFLIGFMRRIRSYEPTEALL
CCEEEEEEEEEEECCHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHH
FTGRRVYGLAGLVLVLGIASYWWHVLAIIAMGVAMLGRFTISMQEKISDETRPAYFAARN
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECC
DGLVVLDTIPNTIGAELNLLPGEMITKVNGVIPRSAEEFYDALQTKTTGAFCKLEVLDTN
CCEEEEECCCCCCCCCEECCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEEEEECC
GELRLAQTALYAGGHHELGIVFVQQEHEWDSEAM
CCEEEEHHHHHCCCCCCEEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]