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The map label for this gene is tsr [C]

Identifier: 218906237

GI number: 218906237

Start: 4847303

End: 4848997

Strand: Direct

Name: tsr [C]

Synonym: BCAH820_5149

Alternate gene names: 218906237

Gene position: 4847303-4848997 (Clockwise)

Preceding gene: 218906236

Following gene: 218906238

Centisome position: 91.41

GC content: 37.29

Gene sequence:

>1695_bases
ATGAAATATGTTAGTATTCGAAAAAAACTACTGTTCACACTCTTAAGCATTTCTTCTTTATTTAGCATTGCTCTTATTGT
TATTCTTTCATTCGCTATGAGCCAAGCGAGCGAAATTGAAACGTTAAAAAATGATGTATCAAAAAGAGCAACCATTTTAA
AAGAACGTGGCGATTGGTTTCAAGCACAAGTTGCTGGCTTACAAGAATATTTACTATCACATGATCAAAAAGGATTAGAT
AAATTCAACCGAGAAGGAAAAAAACTAGCTGATACGAGAGAGAAAGTAACAAGTGATAAAAAACTCCCCGAAGGAATGAA
AGAAGCGATTTTAATGGGCGGAAAATGGCGAAGCGTCATAGATAATGAAGTCCTCCCTCTCGCTCGGGAAGGGAAATGGG
ACGAAGCATCTAAAATCGCTTTAGCTCAAACTGATTACGTAAACGACCTTTTAAGTCGTTTTACGAAATATGCAAATGAA
GAAAATGATAAACGTGACGCATTAATTGCTGACGTGGAGTCTTCTTCATCCCTTATTCAATATATTATCTTCTTCTCACT
CATTACATGTACAGTAACGTCCATTTTATTAGCATGGTGGTTCTCTGGTAAGCTCGTTAAACCGATACGACAAATTGATG
AGAAATTAAAAGAATTAGCTTCGCAAGATGGTGATTTAACTGCTAGATTGCATGTAACGAGTAAAGATGAAATTGGTGAT
ATCGCCAATTCCTTTAATCAAATGCTCGCTAATTTACAACGTATCATAAAACAAGTGCAACAAACATCAACAAGTGTAAA
AGAAGCATCTGAAAATGTGTTTATCGAAACAACTGCTTCTATGGAAAATACCGCAAAAACTGAAGAGACTATGAATGCTC
TTGAGCATAATATTCGTTCACAAGTTTCCAGCATCGAAGAAAGCTCAACTGCAATGGACGATATGGCAACGAGTGTTCAG
CGTATTGCAGAATCCGCCTCTTCTGTTGCTAGCCTAGCTGTTACAACTTCTGAAAAAGCTGATAGTGGGAATAAAGTCAT
TGAAAAATCTATTACACAAATGCATACCATTAATGAAGCTGTTAACGCTACATCACAAGTAGTAGAACGACTCATTACAC
ATACAAATCATATTGATACTGCACTTCAATCCATTTCTAATATCGCGGAACAAACAAACTTACTCGCTTTAAATGCTTCC
ATTGAAGCGGCTCGTGCTGGTGAACATGGAAAAGGCTTCGCTGTTGTTGCCGATGAAGTACGAAAACTTGCTGAACAATC
TCAGCTAGCAGCTACTGATATTAACCATTTACTTCATCGAATTCAAGAAGATACAAAAATAGCAAATGAAATGATGACGC
AAGGTCAGTCAGAGGCATCTGAAGGCATTACAGTCATTCGTACCGCTGGGTCTTCATTCTCAGAAATTGTTAACCACATT
AACAAAGTCTCTACACAAATGCAAGAAGTGTCTGCAACTGCTGAAGAAATGGCCGCAAGTTCTGAAGAAATGAATGCAGC
TTTAAATAACATCGCTTCTATTTCAAATGAAGTTGCCGCCGAAACATCACAAACAGCAACTTCAGCTGGTGACCAAGTAA
ACAAAATGAGTGTCGTTGCTAAAAAAGCGTCTGAAATGAAAACGACTGTGCAAGAACTTGAAGTTCTCGTTTCTCATTTC
AAAACAAACATTTAA

Upstream 100 bases:

>100_bases
TTTATTGAACAGATTAATAACTTCATAATGATGTTTTTATTAATTCTGCTCTAAATATTTATAAATTATAATAAACAGTT
TTTAAAAGGCAGGGGTAACG

Downstream 100 bases:

>100_bases
AGCGAAACTTTCATTTATATTTTTAGGAGTTCTAAACTAGTAAAAAGAGGGATTTACAATCTCTCTTTTTTCACCTTAAA
ATATTTCTTTCTATCTCCCA

Product: chemotaxis signal transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 564; Mature: 564

Protein sequence:

>564_residues
MKYVSIRKKLLFTLLSISSLFSIALIVILSFAMSQASEIETLKNDVSKRATILKERGDWFQAQVAGLQEYLLSHDQKGLD
KFNREGKKLADTREKVTSDKKLPEGMKEAILMGGKWRSVIDNEVLPLAREGKWDEASKIALAQTDYVNDLLSRFTKYANE
ENDKRDALIADVESSSSLIQYIIFFSLITCTVTSILLAWWFSGKLVKPIRQIDEKLKELASQDGDLTARLHVTSKDEIGD
IANSFNQMLANLQRIIKQVQQTSTSVKEASENVFIETTASMENTAKTEETMNALEHNIRSQVSSIEESSTAMDDMATSVQ
RIAESASSVASLAVTTSEKADSGNKVIEKSITQMHTINEAVNATSQVVERLITHTNHIDTALQSISNIAEQTNLLALNAS
IEAARAGEHGKGFAVVADEVRKLAEQSQLAATDINHLLHRIQEDTKIANEMMTQGQSEASEGITVIRTAGSSFSEIVNHI
NKVSTQMQEVSATAEEMAASSEEMNAALNNIASISNEVAAETSQTATSAGDQVNKMSVVAKKASEMKTTVQELEVLVSHF
KTNI

Sequences:

>Translated_564_residues
MKYVSIRKKLLFTLLSISSLFSIALIVILSFAMSQASEIETLKNDVSKRATILKERGDWFQAQVAGLQEYLLSHDQKGLD
KFNREGKKLADTREKVTSDKKLPEGMKEAILMGGKWRSVIDNEVLPLAREGKWDEASKIALAQTDYVNDLLSRFTKYANE
ENDKRDALIADVESSSSLIQYIIFFSLITCTVTSILLAWWFSGKLVKPIRQIDEKLKELASQDGDLTARLHVTSKDEIGD
IANSFNQMLANLQRIIKQVQQTSTSVKEASENVFIETTASMENTAKTEETMNALEHNIRSQVSSIEESSTAMDDMATSVQ
RIAESASSVASLAVTTSEKADSGNKVIEKSITQMHTINEAVNATSQVVERLITHTNHIDTALQSISNIAEQTNLLALNAS
IEAARAGEHGKGFAVVADEVRKLAEQSQLAATDINHLLHRIQEDTKIANEMMTQGQSEASEGITVIRTAGSSFSEIVNHI
NKVSTQMQEVSATAEEMAASSEEMNAALNNIASISNEVAAETSQTATSAGDQVNKMSVVAKKASEMKTTVQELEVLVSHF
KTNI
>Mature_564_residues
MKYVSIRKKLLFTLLSISSLFSIALIVILSFAMSQASEIETLKNDVSKRATILKERGDWFQAQVAGLQEYLLSHDQKGLD
KFNREGKKLADTREKVTSDKKLPEGMKEAILMGGKWRSVIDNEVLPLAREGKWDEASKIALAQTDYVNDLLSRFTKYANE
ENDKRDALIADVESSSSLIQYIIFFSLITCTVTSILLAWWFSGKLVKPIRQIDEKLKELASQDGDLTARLHVTSKDEIGD
IANSFNQMLANLQRIIKQVQQTSTSVKEASENVFIETTASMENTAKTEETMNALEHNIRSQVSSIEESSTAMDDMATSVQ
RIAESASSVASLAVTTSEKADSGNKVIEKSITQMHTINEAVNATSQVVERLITHTNHIDTALQSISNIAEQTNLLALNAS
IEAARAGEHGKGFAVVADEVRKLAEQSQLAATDINHLLHRIQEDTKIANEMMTQGQSEASEGITVIRTAGSSFSEIVNHI
NKVSTQMQEVSATAEEMAASSEEMNAALNNIASISNEVAAETSQTATSAGDQVNKMSVVAKKASEMKTTVQELEVLVSHF
KTNI

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=366, Percent_Identity=28.6885245901639, Blast_Score=142, Evalue=4e-35,
Organism=Escherichia coli, GI1788195, Length=334, Percent_Identity=29.3413173652695, Blast_Score=122, Evalue=5e-29,
Organism=Escherichia coli, GI1787690, Length=336, Percent_Identity=27.9761904761905, Blast_Score=111, Evalue=1e-25,
Organism=Escherichia coli, GI1789453, Length=356, Percent_Identity=28.3707865168539, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI1788194, Length=372, Percent_Identity=27.1505376344086, Blast_Score=107, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 61902; Mature: 61902

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYVSIRKKLLFTLLSISSLFSIALIVILSFAMSQASEIETLKNDVSKRATILKERGDWF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
QAQVAGLQEYLLSHDQKGLDKFNREGKKLADTREKVTSDKKLPEGMKEAILMGGKWRSVI
HHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHH
DNEVLPLAREGKWDEASKIALAQTDYVNDLLSRFTKYANEENDKRDALIADVESSSSLIQ
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHH
YIIFFSLITCTVTSILLAWWFSGKLVKPIRQIDEKLKELASQDGDLTARLHVTSKDEIGD
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHH
IANSFNQMLANLQRIIKQVQQTSTSVKEASENVFIETTASMENTAKTEETMNALEHNIRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHH
QVSSIEESSTAMDDMATSVQRIAESASSVASLAVTTSEKADSGNKVIEKSITQMHTINEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
VNATSQVVERLITHTNHIDTALQSISNIAEQTNLLALNASIEAARAGEHGKGFAVVADEV
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCEEEECCCHHHHHCCCCCCCHHHHHHHH
RKLAEQSQLAATDINHLLHRIQEDTKIANEMMTQGQSEASEGITVIRTAGSSFSEIVNHI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCHHHHHHHH
NKVSTQMQEVSATAEEMAASSEEMNAALNNIASISNEVAAETSQTATSAGDQVNKMSVVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
KKASEMKTTVQELEVLVSHFKTNI
HHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKYVSIRKKLLFTLLSISSLFSIALIVILSFAMSQASEIETLKNDVSKRATILKERGDWF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
QAQVAGLQEYLLSHDQKGLDKFNREGKKLADTREKVTSDKKLPEGMKEAILMGGKWRSVI
HHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHH
DNEVLPLAREGKWDEASKIALAQTDYVNDLLSRFTKYANEENDKRDALIADVESSSSLIQ
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHH
YIIFFSLITCTVTSILLAWWFSGKLVKPIRQIDEKLKELASQDGDLTARLHVTSKDEIGD
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHH
IANSFNQMLANLQRIIKQVQQTSTSVKEASENVFIETTASMENTAKTEETMNALEHNIRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHH
QVSSIEESSTAMDDMATSVQRIAESASSVASLAVTTSEKADSGNKVIEKSITQMHTINEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
VNATSQVVERLITHTNHIDTALQSISNIAEQTNLLALNASIEAARAGEHGKGFAVVADEV
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCEEEECCCHHHHHCCCCCCCHHHHHHHH
RKLAEQSQLAATDINHLLHRIQEDTKIANEMMTQGQSEASEGITVIRTAGSSFSEIVNHI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCHHHHHHHH
NKVSTQMQEVSATAEEMAASSEEMNAALNNIASISNEVAAETSQTATSAGDQVNKMSVVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
KKASEMKTTVQELEVLVSHFKTNI
HHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA