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The map label for this gene is yvcS [H]

Identifier: 218906057

GI number: 218906057

Start: 4665970

End: 4667919

Strand: Reverse

Name: yvcS [H]

Synonym: BCAH820_4945

Alternate gene names: 218906057

Gene position: 4667919-4665970 (Counterclockwise)

Preceding gene: 218906058

Following gene: 218906056

Centisome position: 88.03

GC content: 33.9

Gene sequence:

>1950_bases
ATGACCTTATCTAGCATTGCCCTCCGCAACATACAGCGGAACTTTAAAGACTACTTTGTATATTTTGCATCTATGATTTT
TAGTATCGTTATTTACTTTACATTTAAAGCACTGCAATATAATTCACAAATGGAAAAAGCAGCGGAAGCTTCTAAAAAAA
TTAGCGGGGCATTCCAAGTTTCCAGTGTGATGCTTATTATTTTCGTAGCGGTGTTTATTATATATTCGAACGGTTTCTTT
ACAAGAAAACGTAAAAAAGAAGTTGGGTTATATTCTTTATTAGGTATTCGTAAAAGACAGATTGGTAAAATGCTCTTTTA
TGAAAATATGTTAATGGGATTAATGTCTTTAATTATCGGGATTGCGATTGGTAGTGTCCTTTCAAAACTATTCCTTGAGC
TGCTAGTAAGCATGATGGGATTAAAATTAAATGTACATTTTGAAGTGCCAATGGCTGCAATTGTTGATACAGCAATTATT
TTCTTTGTGATTATTTTATATACATCACTTCAAGGATATCGTCTAATTTATCGATTCAAGCTAATTGAACTTTTCCGTGC
AGAACGTGAAGGAGAAGCAATGCCGAAGGGCTCTGTTATTATGGCATTAATTTCAGTTTTCTTAATCGGTTCAGGTTATT
TCTTAGCGTTAATGTACATGAAAGCAGTTATGTATGCAGACTTTATGGTCGTTGCATTATACATTTTATTAGCGACAGTA
GCAGGAACTTATTTATTGTTCATGTTCTTCACAGTATTTATATTGAAACGTGCAAGAAATAATAAGTCAGCGTTTTATAA
CGGTATGAATATGGTAACGACGTCACAATTACTATATCGTATTAAAGGAAATGCGAAATCACTTGCGACAATTGCGATTT
TAAGTGCAGTAACATTAACGGCGGTTGGTACGTCAGTTACGATGTATTACAATACATTTACGCAATCAAAAGTGGCTGCA
CCGTATAGTTATTCTTATGAGAAAAAAGATGAAGCATTAGATAAAAAAGTAAATGAAATACTTGCTGGAGAAAAGAGTAA
TCATCCAGTGACATATGAATCAGAACTTGAAATGATTCCTGTGAAAGGAACATTTCAAGGTGAAAGAGCGGATCAAGTTC
TGAACACACACTATAATGTGACAAAGCAGTACCAGCTTATTTCTCAATCAAACTTTAATACAATCGCGAAACATTTAGAT
ATAGAACCTGTAAATTTAAGTGCAAATGAAGCTTTTGTATATGATAGTTTATATATTGAAACACTTGATTTTGGTCCTCT
TTACACAGGAAATACAGCTGTATTCCCTGTTGGAAATGAATCGAAAGAGTTAAAGATTAAAGGTGTAAATAGTAGAAGTG
TTACAAACTTAAATGAACTATTTGTAATCGTTCCAGATCAAACATATGAGCAGGCGAAACAAGTAAACGAAACGCGCATT
GTAAAAAATATTGATGTAAAAGGTGAGCGAAATAGTAAAGAGTTAACAGCGAAATTAGCAAGCGTTATGCCAGCTGGTGA
ATCAGAAATTTTAAAACCATTTCATGATTTCTATACAGGATTCCAAATGGGACTTGAAACGACAGGTTTAATGATGTTCA
TCGGACTATTTTTAGGATTAGTATTCCTATTAGCGACAGGTTCAATCATTTACTTCAAGCAGCTTACAGAAGCAAGTGCT
GACCGTGATCGTTACGTCGTTCTTCATAAAGTCGGTGTAACGAAGCAAGAGATGAAGAAAGCTATCGCAAAACAAGTAAG
CTTTATCTTCGCAATTCCATTAGTAATCGGAATTTTGCACAGCTTATTTGCACTAAAAGGTTTAGGGAACATATTACCGT
ATGAAATCATGATCCCACTTCTAATTAGTATCGGAGTATACGGTGTCATTTATATTGGATATTACTTCTTAACAGTTCGC
TCTTATTATAAGATTGTGAGTGCGAAGTAA

Upstream 100 bases:

>100_bases
GGTGAGTTATATAAAGAATTGCACCGCGGCGAGTTAACGCGTAAACAGTTCTTCCAACAAGTCGTTGACGTAATGTCTTC
TATTTCCGGAGGTATGGCTG

Downstream 100 bases:

>100_bases
TAAAGGGGCAGCTATCGCTATAGGCGATAGCTGTTTTTTATTCTTCATAAAATCTTAAGAAATCTCCTCAATTTTTGTTA
AGAAACGATAGTTATACTTA

Product: efflux ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 649; Mature: 648

Protein sequence:

>649_residues
MTLSSIALRNIQRNFKDYFVYFASMIFSIVIYFTFKALQYNSQMEKAAEASKKISGAFQVSSVMLIIFVAVFIIYSNGFF
TRKRKKEVGLYSLLGIRKRQIGKMLFYENMLMGLMSLIIGIAIGSVLSKLFLELLVSMMGLKLNVHFEVPMAAIVDTAII
FFVIILYTSLQGYRLIYRFKLIELFRAEREGEAMPKGSVIMALISVFLIGSGYFLALMYMKAVMYADFMVVALYILLATV
AGTYLLFMFFTVFILKRARNNKSAFYNGMNMVTTSQLLYRIKGNAKSLATIAILSAVTLTAVGTSVTMYYNTFTQSKVAA
PYSYSYEKKDEALDKKVNEILAGEKSNHPVTYESELEMIPVKGTFQGERADQVLNTHYNVTKQYQLISQSNFNTIAKHLD
IEPVNLSANEAFVYDSLYIETLDFGPLYTGNTAVFPVGNESKELKIKGVNSRSVTNLNELFVIVPDQTYEQAKQVNETRI
VKNIDVKGERNSKELTAKLASVMPAGESEILKPFHDFYTGFQMGLETTGLMMFIGLFLGLVFLLATGSIIYFKQLTEASA
DRDRYVVLHKVGVTKQEMKKAIAKQVSFIFAIPLVIGILHSLFALKGLGNILPYEIMIPLLISIGVYGVIYIGYYFLTVR
SYYKIVSAK

Sequences:

>Translated_649_residues
MTLSSIALRNIQRNFKDYFVYFASMIFSIVIYFTFKALQYNSQMEKAAEASKKISGAFQVSSVMLIIFVAVFIIYSNGFF
TRKRKKEVGLYSLLGIRKRQIGKMLFYENMLMGLMSLIIGIAIGSVLSKLFLELLVSMMGLKLNVHFEVPMAAIVDTAII
FFVIILYTSLQGYRLIYRFKLIELFRAEREGEAMPKGSVIMALISVFLIGSGYFLALMYMKAVMYADFMVVALYILLATV
AGTYLLFMFFTVFILKRARNNKSAFYNGMNMVTTSQLLYRIKGNAKSLATIAILSAVTLTAVGTSVTMYYNTFTQSKVAA
PYSYSYEKKDEALDKKVNEILAGEKSNHPVTYESELEMIPVKGTFQGERADQVLNTHYNVTKQYQLISQSNFNTIAKHLD
IEPVNLSANEAFVYDSLYIETLDFGPLYTGNTAVFPVGNESKELKIKGVNSRSVTNLNELFVIVPDQTYEQAKQVNETRI
VKNIDVKGERNSKELTAKLASVMPAGESEILKPFHDFYTGFQMGLETTGLMMFIGLFLGLVFLLATGSIIYFKQLTEASA
DRDRYVVLHKVGVTKQEMKKAIAKQVSFIFAIPLVIGILHSLFALKGLGNILPYEIMIPLLISIGVYGVIYIGYYFLTVR
SYYKIVSAK
>Mature_648_residues
TLSSIALRNIQRNFKDYFVYFASMIFSIVIYFTFKALQYNSQMEKAAEASKKISGAFQVSSVMLIIFVAVFIIYSNGFFT
RKRKKEVGLYSLLGIRKRQIGKMLFYENMLMGLMSLIIGIAIGSVLSKLFLELLVSMMGLKLNVHFEVPMAAIVDTAIIF
FVIILYTSLQGYRLIYRFKLIELFRAEREGEAMPKGSVIMALISVFLIGSGYFLALMYMKAVMYADFMVVALYILLATVA
GTYLLFMFFTVFILKRARNNKSAFYNGMNMVTTSQLLYRIKGNAKSLATIAILSAVTLTAVGTSVTMYYNTFTQSKVAAP
YSYSYEKKDEALDKKVNEILAGEKSNHPVTYESELEMIPVKGTFQGERADQVLNTHYNVTKQYQLISQSNFNTIAKHLDI
EPVNLSANEAFVYDSLYIETLDFGPLYTGNTAVFPVGNESKELKIKGVNSRSVTNLNELFVIVPDQTYEQAKQVNETRIV
KNIDVKGERNSKELTAKLASVMPAGESEILKPFHDFYTGFQMGLETTGLMMFIGLFLGLVFLLATGSIIYFKQLTEASAD
RDRYVVLHKVGVTKQEMKKAIAKQVSFIFAIPLVIGILHSLFALKGLGNILPYEIMIPLLISIGVYGVIYIGYYFLTVRS
YYKIVSAK

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 73119; Mature: 72988

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLSSIALRNIQRNFKDYFVYFASMIFSIVIYFTFKALQYNSQMEKAAEASKKISGAFQV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSVMLIIFVAVFIIYSNGFFTRKRKKEVGLYSLLGIRKRQIGKMLFYENMLMGLMSLIIG
HHHHHHHHHHHHHHHCCCCEECHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAIGSVLSKLFLELLVSMMGLKLNVHFEVPMAAIVDTAIIFFVIILYTSLQGYRLIYRFK
HHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LIELFRAEREGEAMPKGSVIMALISVFLIGSGYFLALMYMKAVMYADFMVVALYILLATV
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGTYLLFMFFTVFILKRARNNKSAFYNGMNMVTTSQLLYRIKGNAKSLATIAILSAVTLT
HHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
AVGTSVTMYYNTFTQSKVAAPYSYSYEKKDEALDKKVNEILAGEKSNHPVTYESELEMIP
HHCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCEEE
VKGTFQGERADQVLNTHYNVTKQYQLISQSNFNTIAKHLDIEPVNLSANEAFVYDSLYIE
CCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCEEEEEEEEEE
TLDFGPLYTGNTAVFPVGNESKELKIKGVNSRSVTNLNELFVIVPDQTYEQAKQVNETRI
EECCCCEECCCEEEEECCCCCCEEEEEECCCCCCCCCCCEEEEECCCHHHHHHHCCHHHH
VKNIDVKGERNSKELTAKLASVMPAGESEILKPFHDFYTGFQMGLETTGLMMFIGLFLGL
HEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFLLATGSIIYFKQLTEASADRDRYVVLHKVGVTKQEMKKAIAKQVSFIFAIPLVIGILH
HHHHHCCCCHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SLFALKGLGNILPYEIMIPLLISIGVYGVIYIGYYFLTVRSYYKIVSAK
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TLSSIALRNIQRNFKDYFVYFASMIFSIVIYFTFKALQYNSQMEKAAEASKKISGAFQV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSVMLIIFVAVFIIYSNGFFTRKRKKEVGLYSLLGIRKRQIGKMLFYENMLMGLMSLIIG
HHHHHHHHHHHHHHHCCCCEECHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAIGSVLSKLFLELLVSMMGLKLNVHFEVPMAAIVDTAIIFFVIILYTSLQGYRLIYRFK
HHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LIELFRAEREGEAMPKGSVIMALISVFLIGSGYFLALMYMKAVMYADFMVVALYILLATV
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGTYLLFMFFTVFILKRARNNKSAFYNGMNMVTTSQLLYRIKGNAKSLATIAILSAVTLT
HHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
AVGTSVTMYYNTFTQSKVAAPYSYSYEKKDEALDKKVNEILAGEKSNHPVTYESELEMIP
HHCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCEEE
VKGTFQGERADQVLNTHYNVTKQYQLISQSNFNTIAKHLDIEPVNLSANEAFVYDSLYIE
CCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCEEEEEEEEEE
TLDFGPLYTGNTAVFPVGNESKELKIKGVNSRSVTNLNELFVIVPDQTYEQAKQVNETRI
EECCCCEECCCEEEEECCCCCCEEEEEECCCCCCCCCCCEEEEECCCHHHHHHHCCHHHH
VKNIDVKGERNSKELTAKLASVMPAGESEILKPFHDFYTGFQMGLETTGLMMFIGLFLGL
HEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFLLATGSIIYFKQLTEASADRDRYVVLHKVGVTKQEMKKAIAKQVSFIFAIPLVIGILH
HHHHHCCCCHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SLFALKGLGNILPYEIMIPLLISIGVYGVIYIGYYFLTVRSYYKIVSAK
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]