Click here to switch to the map view.

The map label for this gene is bmrU [H]

Identifier: 218906050

GI number: 218906050

Start: 4660810

End: 4661712

Strand: Direct

Name: bmrU [H]

Synonym: BCAH820_4938

Alternate gene names: 218906050

Gene position: 4660810-4661712 (Clockwise)

Preceding gene: 218906049

Following gene: 218906052

Centisome position: 87.9

GC content: 38.43

Gene sequence:

>903_bases
ATGACAAAGACAAAATTTGAAAAAGTACTCCTCATCGTAAATCCAAAAGCTGGACAAGGCGACTTACATACAAATTTAAC
GAAAATCGTACCACCTCTTGCCGCGGCTTTTCCTGACTTACATATCCTTCATACGAAAGAACAAGGTGATGCAACAAAAT
ATTGCCAAGAGTTTGCTAGTAAAGTAGATTTAATTATCGTCTTTGGTGGTGACGGCACAGTATTTGAATGCACAAACGGC
TTAGCACCTCTTGAAATTAGACCTACACTTGCAATTATTCCAGGCGGAACTTGCAATGACTTCTCTCGCACACTAGGCGT
TCCGCAAAACATTGCAGAAGCAGCAAAACTTATCACTAAGGAACACGTAAAACCAGTTGACGTTGCAAAAGCAAATGGAC
AACATTTCTTAAACTTCTGGGGCATTGGACTCGTATCTGAAGTATCAAACAATATCGATGCAGAAGAAAAAGCAAAGCTT
GGAAAAATCGGCTACTACTTAAGCACAATTCGAACTGTCAAAAATGCTGAAACATTCCCAGTAAAAATTACGTACGACGG
ACAGGTATATGAAGACGAAGCTGTTCTTGTTATGGTTGGAAACGGTGAATATCTTGGCGGCATCCCGTCCTTTATTCCGA
ACGTAAAATGTGATGACGGAACACTTGATATTTTCGTAGTCAAATCAACAGGTATTCAAGCATTTAAAGATTACATCGGA
AAGAAACTATTTGAAGACTCAAACGAAAATGACATCTTCCACGTAAAAGCGAAATCCATTCATATTGAAACAGAAGAAGA
AAAAGAAGTAGATACAGATGGAGAAAGTTCGCTTCATACACCTTGTAACATTGAATTATTACCAGGACACTTTACGATGA
TTTATAATCCTGCGGTTGTGTAA

Upstream 100 bases:

>100_bases
ACTGACAATCTTAGCGCCCTATTAATAGGAAGAAGCTGTTCTGCAATACATCGGAACAGCTCCTTTCTTTCCATTACAAA
AAAACAGGGAGAGATGAAAA

Downstream 100 bases:

>100_bases
TACAAAAAAACGAGCTAAAGTTTTAACATTTTAGCTCGTCTTTTTTATTACAAAGATATTTTAATATGAATTTTCGTAAT
CAAACTCCACCCAATTTTTC

Product: bmrU protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MTKTKFEKVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKEQGDATKYCQEFASKVDLIIVFGGDGTVFECTNG
LAPLEIRPTLAIIPGGTCNDFSRTLGVPQNIAEAAKLITKEHVKPVDVAKANGQHFLNFWGIGLVSEVSNNIDAEEKAKL
GKIGYYLSTIRTVKNAETFPVKITYDGQVYEDEAVLVMVGNGEYLGGIPSFIPNVKCDDGTLDIFVVKSTGIQAFKDYIG
KKLFEDSNENDIFHVKAKSIHIETEEEKEVDTDGESSLHTPCNIELLPGHFTMIYNPAVV

Sequences:

>Translated_300_residues
MTKTKFEKVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKEQGDATKYCQEFASKVDLIIVFGGDGTVFECTNG
LAPLEIRPTLAIIPGGTCNDFSRTLGVPQNIAEAAKLITKEHVKPVDVAKANGQHFLNFWGIGLVSEVSNNIDAEEKAKL
GKIGYYLSTIRTVKNAETFPVKITYDGQVYEDEAVLVMVGNGEYLGGIPSFIPNVKCDDGTLDIFVVKSTGIQAFKDYIG
KKLFEDSNENDIFHVKAKSIHIETEEEKEVDTDGESSLHTPCNIELLPGHFTMIYNPAVV
>Mature_299_residues
TKTKFEKVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKEQGDATKYCQEFASKVDLIIVFGGDGTVFECTNGL
APLEIRPTLAIIPGGTCNDFSRTLGVPQNIAEAAKLITKEHVKPVDVAKANGQHFLNFWGIGLVSEVSNNIDAEEKAKLG
KIGYYLSTIRTVKNAETFPVKITYDGQVYEDEAVLVMVGNGEYLGGIPSFIPNVKCDDGTLDIFVVKSTGIQAFKDYIGK
KLFEDSNENDIFHVKAKSIHIETEEEKEVDTDGESSLHTPCNIELLPGHFTMIYNPAVV

Specific function: May catalyze the ATP-dependent phosphorylation of lipids other than diacylglycerol (DAG). In fact, is not able to exhibit diacylglycerol kinase activity in vitro [H]

COG id: COG1597

COG function: function code IR; Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DAGKc domain [H]

Homologues:

Organism=Escherichia coli, GI1788402, Length=299, Percent_Identity=26.7558528428094, Blast_Score=97, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017438
- InterPro:   IPR005218
- InterPro:   IPR001206 [H]

Pfam domain/function: PF00781 DAGK_cat [H]

EC number: NA

Molecular weight: Translated: 32808; Mature: 32677

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKTKFEKVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKEQGDATKYCQEFAS
CCCCCCEEEEEEECCCCCCCCHHCCHHHHHCHHHHHCCCEEEEEECCCCCHHHHHHHHHC
KVDLIIVFGGDGTVFECTNGLAPLEIRPTLAIIPGGTCNDFSRTLGVPQNIAEAAKLITK
CCCEEEEECCCCCEEEECCCCCCEEECCEEEEECCCCCCHHHHHCCCCHHHHHHHHHHHH
EHVKPVDVAKANGQHFLNFWGIGLVSEVSNNIDAEEKAKLGKIGYYLSTIRTVKNAETFP
HCCCCCEEECCCCCEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEE
VKITYDGQVYEDEAVLVMVGNGEYLGGIPSFIPNVKCDDGTLDIFVVKSTGIQAFKDYIG
EEEEECCEEECCCEEEEEECCCCCCCCCHHHCCCCCCCCCCEEEEEEECCCHHHHHHHHH
KKLFEDSNENDIFHVKAKSIHIETEEEKEVDTDGESSLHTPCNIELLPGHFTMIYNPAVV
HHHHCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCEEEEEECCCCC
>Mature Secondary Structure 
TKTKFEKVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKEQGDATKYCQEFAS
CCCCCEEEEEEECCCCCCCCHHCCHHHHHCHHHHHCCCEEEEEECCCCCHHHHHHHHHC
KVDLIIVFGGDGTVFECTNGLAPLEIRPTLAIIPGGTCNDFSRTLGVPQNIAEAAKLITK
CCCEEEEECCCCCEEEECCCCCCEEECCEEEEECCCCCCHHHHHCCCCHHHHHHHHHHHH
EHVKPVDVAKANGQHFLNFWGIGLVSEVSNNIDAEEKAKLGKIGYYLSTIRTVKNAETFP
HCCCCCEEECCCCCEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEE
VKITYDGQVYEDEAVLVMVGNGEYLGGIPSFIPNVKCDDGTLDIFVVKSTGIQAFKDYIG
EEEEECCEEECCCEEEEEECCCCCCCCCHHHCCCCCCCCCCEEEEEEECCCHHHHHHHHH
KKLFEDSNENDIFHVKAKSIHIETEEEKEVDTDGESSLHTPCNIELLPGHFTMIYNPAVV
HHHHCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7961792; 8969508; 9384377 [H]