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The map label for this gene is 218906005

Identifier: 218906005

GI number: 218906005

Start: 4623865

End: 4624557

Strand: Direct

Name: 218906005

Synonym: BCAH820_4893

Alternate gene names: NA

Gene position: 4623865-4624557 (Clockwise)

Preceding gene: 218906004

Following gene: 218906008

Centisome position: 87.2

GC content: 44.01

Gene sequence:

>693_bases
ATGTACCCACGTAATTGTTTTAGTTGCGATGGTAGGCGTAACAGTGGCTCTACTGGAAACACCGGACCGACTGGAAATAT
CGGACCTACAGGGAGCACTGGGCCTACTGGTAACACCGGACCTTCCGGCAATACTGGACCCACTGGTAACACTGGACCTT
CCGGCAATACTGGACCCACTGGTAACACCGGACCTACTGGCTCTGCCGGTAGTGCATCAGCAAAAAGCATTGTTTTTCAA
GGAACAAATGCTGGTTTTCAACGTATAGCGGGGTCTCCTGGAATTGACTCCAATGTTATTCTGTATGTCACTGCTGGAGC
CGGTAGCATAGTTGGCTTTGCTGCGTCTATAAATGTAAATAACTTACCTGCTGCCGTTTATACGATTAATATTTGCAGGA
ACGTCCCCACAAACCTCACAACCCCTACTTCTAACTACATTCTATCTACAATTACCTTAACTATCACTGACAAAATTACA
GGAACTATAGTATTCTCAATTAAACCGACAGATACTGGATCAGGACAAATTCAAGTGTTTAATCCTACTCCGGCAGTAGG
TCCCGCTACTGTAACTTGGATTAGCATTACAACTGGAAACCCAGTTTCAAGAGGAGATGCTATATCCCTTTATATTAACC
CTGGAATTACTGCCAGTGCTGTATATTCTGTCTTTCTAATCACAAATATTTAG

Upstream 100 bases:

>100_bases
CACAATACAATCGAACACACAAAAATATAGAATTCATAATATGTATATAGTGGTTCTATTTTTACAACTAGTTTTTCAAA
ATAGAGACAGGAGAACATAC

Downstream 100 bases:

>100_bases
TTCTCTCTTAAAAGTAATTTATTCAACAGAAAAAGCCCCAATAATTTGGGTTAACAATTAACAAACTCACTATATATTAC
CATCATAAAAATACCCATAT

Product: collagen triple helix repeat protein

Products: NA

Alternate protein names: Triple Helix Repeat-Containing Collagen

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MYPRNCFSCDGRRNSGSTGNTGPTGNIGPTGSTGPTGNTGPSGNTGPTGNTGPSGNTGPTGNTGPTGSAGSASAKSIVFQ
GTNAGFQRIAGSPGIDSNVILYVTAGAGSIVGFAASINVNNLPAAVYTINICRNVPTNLTTPTSNYILSTITLTITDKIT
GTIVFSIKPTDTGSGQIQVFNPTPAVGPATVTWISITTGNPVSRGDAISLYINPGITASAVYSVFLITNI

Sequences:

>Translated_230_residues
MYPRNCFSCDGRRNSGSTGNTGPTGNIGPTGSTGPTGNTGPSGNTGPTGNTGPSGNTGPTGNTGPTGSAGSASAKSIVFQ
GTNAGFQRIAGSPGIDSNVILYVTAGAGSIVGFAASINVNNLPAAVYTINICRNVPTNLTTPTSNYILSTITLTITDKIT
GTIVFSIKPTDTGSGQIQVFNPTPAVGPATVTWISITTGNPVSRGDAISLYINPGITASAVYSVFLITNI
>Mature_230_residues
MYPRNCFSCDGRRNSGSTGNTGPTGNIGPTGSTGPTGNTGPSGNTGPTGNTGPSGNTGPTGNTGPTGSAGSASAKSIVFQ
GTNAGFQRIAGSPGIDSNVILYVTAGAGSIVGFAASINVNNLPAAVYTINICRNVPTNLTTPTSNYILSTITLTITDKIT
GTIVFSIKPTDTGSGQIQVFNPTPAVGPATVTWISITTGNPVSRGDAISLYINPGITASAVYSVFLITNI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22922; Mature: 22922

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYPRNCFSCDGRRNSGSTGNTGPTGNIGPTGSTGPTGNTGPSGNTGPTGNTGPSGNTGPT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GNTGPTGSAGSASAKSIVFQGTNAGFQRIAGSPGIDSNVILYVTAGAGSIVGFAASINVN
CCCCCCCCCCCCCCEEEEEECCCCCHHHHCCCCCCCCCEEEEEECCCCCEEEEEEEECCC
NLPAAVYTINICRNVPTNLTTPTSNYILSTITLTITDKITGTIVFSIKPTDTGSGQIQVF
CCCEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEECCCEEEEEEEEECCCCCCCEEEEE
NPTPAVGPATVTWISITTGNPVSRGDAISLYINPGITASAVYSVFLITNI
CCCCCCCCEEEEEEEEECCCCCCCCCEEEEEECCCCCHHHEEEEEEEECC
>Mature Secondary Structure
MYPRNCFSCDGRRNSGSTGNTGPTGNIGPTGSTGPTGNTGPSGNTGPTGNTGPSGNTGPT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GNTGPTGSAGSASAKSIVFQGTNAGFQRIAGSPGIDSNVILYVTAGAGSIVGFAASINVN
CCCCCCCCCCCCCCEEEEEECCCCCHHHHCCCCCCCCCEEEEEECCCCCEEEEEEEECCC
NLPAAVYTINICRNVPTNLTTPTSNYILSTITLTITDKITGTIVFSIKPTDTGSGQIQVF
CCCEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEECCCEEEEEEEEECCCCCCCEEEEE
NPTPAVGPATVTWISITTGNPVSRGDAISLYINPGITASAVYSVFLITNI
CCCCCCCCEEEEEEEEECCCCCCCCCEEEEEECCCCCHHHEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA