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The map label for this gene is gerIA [H]

Identifier: 218905964

GI number: 218905964

Start: 4588518

End: 4589885

Strand: Direct

Name: gerIA [H]

Synonym: BCAH820_4852

Alternate gene names: 218905964

Gene position: 4588518-4589885 (Clockwise)

Preceding gene: 218905963

Following gene: 218905965

Centisome position: 86.53

GC content: 35.53

Gene sequence:

>1368_bases
ATGCCTTATTGGATTTCTTACTATCGTCCTTCACTTGATGGTGAGAAATTGCAAAAGTATTTAATGCCTACTCTTTTAGA
ACGACCTAACGCATCACTAGAAGAGCTGAAGGAACATATTCCAATGAGCGGCATTACAATTACAAACGATTTACAAAAAA
TTGAGGACATGGTTTTAAAGGGACATGCGATTGTTCAAGTAAATCAACAAGATCAAAAATGTATGCTCGCAAATATTGCA
ATTGATAATTATCGTGCACCAACTCCACCTTTAAACGAATCGACTGTTATTGGTCCGCAAGAAGGTTTTGTAGAGGACAT
TGACACAAATATTAATTTAGTTCGAAAACGTCTTCCTGTTTTAGATTTACAAACAAAAGAAATGATTGTCGGTGAGTTTT
CCAAAACAAAAGTTGTCATGATGTATTTAGACAATCTCGCTGAAAAAGATAATGTAGATTTTCTCGAGGAATCATTACGT
GCTCTTGAATATGATCAAATTAATGATAGTGCTTATATACAAGAATTGATGGGAGAAAAGTCGATTTTTCCTCTTTATAT
CAATACAGAACGCACTGATAGAGTTACAAAAGCATTAATCGATGGAAAAATCGCTATTTTTGTGGACGGTTCTCCAAGTG
TTTTATTAACACCTGTATCCTATTTCGATTTTTTCATTTCACCAGAAGACTACAACGTCTCTTGGCTATACGCTACATTT
TCAAGGATTTTACGCCTTATCGCCGTTCTATTCTCGATATGCGCTACACCGTTATACGTTGCAGTTTTAAATTATCATTA
TGAACTCATTCCAAGTGATTTACTTGAAACTTTAATTTTATCAAGGGCACAAGTACCATTCCCACCTTTAATTGAAGCTC
TCTTTTTAGAACTCGCAATCGACTTATTGAGAGAAGCTGGGGCGAGGTTACCGATGAAAGTTGGTCAAACGCTCGGTATT
GTAGGCGGTATCGTAATCGGACAAGCATCTGTACAAGCTGGTTTAACGAGTAATATTTTATTAATTATCGTCGCCTTATC
AGCACTCGCTTCCTTTATTACACCTATTTATAAAATGGGGAATGCGGTTCGATTACTACGCTTCCCGTTTCTCATATTTG
CAGAAATAGGAGGACTTTTCGGGATTTCTCTTGGGTTTATCTTTTTATTTACTCATCTATTTAGACTTACTTCCTTACGT
AAACCATACGCTTTGTTTTATCCAACAAGACAACAATCTGTTAAAGATTCTTGGATTCGTTTTCCTTTAACAATGATTGA
TACAAGAGATGTACAAGCAAGGCCACAGCATGTAAAAAAATCAGCAAAAGGAATTTCAACAAAACATAGATCGGACTTTG
ATGATTAA

Upstream 100 bases:

>100_bases
GAAACCAGAAAAAGATCGTATTCATTCTTTACAAGATTTAATAGAGAAACTGAAAAAGTCTAGTGATTTTGTGAATTATC
ATACATCTGACGATGAAACG

Downstream 100 bases:

>100_bases
GAAATGAGGTGCATTCGATGAGTAAAGTTCAAGAAAAATATCAAATATCTCCTATCTTCGTTTTCTTCTTAATTCACGGT
GCACAGTTTGGAGCTGGCGT

Product: spore germination protein GerHA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 455; Mature: 454

Protein sequence:

>455_residues
MPYWISYYRPSLDGEKLQKYLMPTLLERPNASLEELKEHIPMSGITITNDLQKIEDMVLKGHAIVQVNQQDQKCMLANIA
IDNYRAPTPPLNESTVIGPQEGFVEDIDTNINLVRKRLPVLDLQTKEMIVGEFSKTKVVMMYLDNLAEKDNVDFLEESLR
ALEYDQINDSAYIQELMGEKSIFPLYINTERTDRVTKALIDGKIAIFVDGSPSVLLTPVSYFDFFISPEDYNVSWLYATF
SRILRLIAVLFSICATPLYVAVLNYHYELIPSDLLETLILSRAQVPFPPLIEALFLELAIDLLREAGARLPMKVGQTLGI
VGGIVIGQASVQAGLTSNILLIIVALSALASFITPIYKMGNAVRLLRFPFLIFAEIGGLFGISLGFIFLFTHLFRLTSLR
KPYALFYPTRQQSVKDSWIRFPLTMIDTRDVQARPQHVKKSAKGISTKHRSDFDD

Sequences:

>Translated_455_residues
MPYWISYYRPSLDGEKLQKYLMPTLLERPNASLEELKEHIPMSGITITNDLQKIEDMVLKGHAIVQVNQQDQKCMLANIA
IDNYRAPTPPLNESTVIGPQEGFVEDIDTNINLVRKRLPVLDLQTKEMIVGEFSKTKVVMMYLDNLAEKDNVDFLEESLR
ALEYDQINDSAYIQELMGEKSIFPLYINTERTDRVTKALIDGKIAIFVDGSPSVLLTPVSYFDFFISPEDYNVSWLYATF
SRILRLIAVLFSICATPLYVAVLNYHYELIPSDLLETLILSRAQVPFPPLIEALFLELAIDLLREAGARLPMKVGQTLGI
VGGIVIGQASVQAGLTSNILLIIVALSALASFITPIYKMGNAVRLLRFPFLIFAEIGGLFGISLGFIFLFTHLFRLTSLR
KPYALFYPTRQQSVKDSWIRFPLTMIDTRDVQARPQHVKKSAKGISTKHRSDFDD
>Mature_454_residues
PYWISYYRPSLDGEKLQKYLMPTLLERPNASLEELKEHIPMSGITITNDLQKIEDMVLKGHAIVQVNQQDQKCMLANIAI
DNYRAPTPPLNESTVIGPQEGFVEDIDTNINLVRKRLPVLDLQTKEMIVGEFSKTKVVMMYLDNLAEKDNVDFLEESLRA
LEYDQINDSAYIQELMGEKSIFPLYINTERTDRVTKALIDGKIAIFVDGSPSVLLTPVSYFDFFISPEDYNVSWLYATFS
RILRLIAVLFSICATPLYVAVLNYHYELIPSDLLETLILSRAQVPFPPLIEALFLELAIDLLREAGARLPMKVGQTLGIV
GGIVIGQASVQAGLTSNILLIIVALSALASFITPIYKMGNAVRLLRFPFLIFAEIGGLFGISLGFIFLFTHLFRLTSLRK
PYALFYPTRQQSVKDSWIRFPLTMIDTRDVQARPQHVKKSAKGISTKHRSDFDD

Specific function: Required for inosine germination [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerABKA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004995 [H]

Pfam domain/function: PF03323 GerA [H]

EC number: NA

Molecular weight: Translated: 51469; Mature: 51338

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYWISYYRPSLDGEKLQKYLMPTLLERPNASLEELKEHIPMSGITITNDLQKIEDMVLK
CCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCEEHHHHHHHHHHHHC
GHAIVQVNQQDQKCMLANIAIDNYRAPTPPLNESTVIGPQEGFVEDIDTNINLVRKRLPV
CCEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCEEECCCCCCHHHHCCCHHHHHHHCCC
LDLQTKEMIVGEFSKTKVVMMYLDNLAEKDNVDFLEESLRALEYDQINDSAYIQELMGEK
CCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
SIFPLYINTERTDRVTKALIDGKIAIFVDGSPSVLLTPVSYFDFFISPEDYNVSWLYATF
CEEEEEECCCHHHHHHHHHHCCEEEEEECCCCCEEEEEHHHHHEEECCCCCCCCHHHHHH
SRILRLIAVLFSICATPLYVAVLNYHYELIPSDLLETLILSRAQVPFPPLIEALFLELAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
DLLREAGARLPMKVGQTLGIVGGIVIGQASVQAGLTSNILLIIVALSALASFITPIYKMG
HHHHHCCCCCCHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
NAVRLLRFPFLIFAEIGGLFGISLGFIFLFTHLFRLTSLRKPYALFYPTRQQSVKDSWIR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHH
FPLTMIDTRDVQARPQHVKKSAKGISTKHRSDFDD
CCCCEECCCCCCCCHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
PYWISYYRPSLDGEKLQKYLMPTLLERPNASLEELKEHIPMSGITITNDLQKIEDMVLK
CEEECCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCEEHHHHHHHHHHHHC
GHAIVQVNQQDQKCMLANIAIDNYRAPTPPLNESTVIGPQEGFVEDIDTNINLVRKRLPV
CCEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCEEECCCCCCHHHHCCCHHHHHHHCCC
LDLQTKEMIVGEFSKTKVVMMYLDNLAEKDNVDFLEESLRALEYDQINDSAYIQELMGEK
CCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
SIFPLYINTERTDRVTKALIDGKIAIFVDGSPSVLLTPVSYFDFFISPEDYNVSWLYATF
CEEEEEECCCHHHHHHHHHHCCEEEEEECCCCCEEEEEHHHHHEEECCCCCCCCHHHHHH
SRILRLIAVLFSICATPLYVAVLNYHYELIPSDLLETLILSRAQVPFPPLIEALFLELAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
DLLREAGARLPMKVGQTLGIVGGIVIGQASVQAGLTSNILLIIVALSALASFITPIYKMG
HHHHHCCCCCCHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
NAVRLLRFPFLIFAEIGGLFGISLGFIFLFTHLFRLTSLRKPYALFYPTRQQSVKDSWIR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHH
FPLTMIDTRDVQARPQHVKKSAKGISTKHRSDFDD
CCCCEECCCCCCCCHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9852021 [H]