Click here to switch to the map view.

The map label for this gene is ytfP [H]

Identifier: 218905937

GI number: 218905937

Start: 4568017

End: 4569288

Strand: Direct

Name: ytfP [H]

Synonym: BCAH820_4825

Alternate gene names: 218905937

Gene position: 4568017-4569288 (Clockwise)

Preceding gene: 218905934

Following gene: 218905938

Centisome position: 86.15

GC content: 39.54

Gene sequence:

>1272_bases
ATGCATTATGATGTTATTGTCATCGGCGGCGGGCCTTCTGGGCTAATGGCTGCAATCGGTGCTGCAGAAGAAGGCGCAAG
CGTCTTACTTCTTGATAAAGGAAATAAACTAGGGCGTAAACTTGCGATTTCAGGTGGTGGCCGTTGTAACGTAACGAACC
GTCTACCACTTGATGAAATCGTTAAACATATACCAGGAAATGGCCGCTTCTTATACAGCGCTTTTTCTATTTTTAATAAT
GAAGATATTATTACATTCTTCGAAAATCTTGGTGTAAAACTGAAAGAAGAGGATCATGGCCGCATGTTCCCTGTTTCAAA
TAAAGCGCAATCGGTAGTAGACGCACTTTTAACACGATTAAAAGATTTAGGTGTAAAGATCCGCACGAATACACCTGTTG
AAACGATTGAATATGAAAATGGTCAAACGAAAGCAGTCGTACTAAAGACTGGCGAAGTGCTAGAAACAAATCACGTCGTT
ATCGCTGTTGGCGGAAAATCTGTTCCTCAAACTGGTTCTACTGGCGACGGATATGCTTGGGCTAAAAAAGCTGGACATAC
AATTACAGAATTATTCCCAACAGAAGTACCAATCCTTTCAAACGAACCATTTATTCAAGATCGTTCATTACAAGGACTTG
CTTTGCGAGACGTAAATTTAAGTGTATTAAACCCGAAAGGAAAGGCTATCATTTCTCACAAAATGGACATGCTCTTCACT
CACTTCGGTTTATCTGGTCCTGCTGCCCTTCGCTGTAGTCAATTCGTTGTAAAAGCACTGAAGAAGTTCAAAACGAATAC
AGTGCAAATGAGCATCGATGCATTGCCAGAAGAAAATAGTGAACAACTATTCCAGCGCATGCTGAAACAAATGAAAGAAG
ATCCGAAAAAAGGAATTAAAAACGTGTTAAAAGGTTATGTACCTGAACGTTACTTCCTATTCTTATTAGAAAGAAATGAA
ATTGATGGCAGCGAACAAGCTGGACAAGTTTCTCACGAAAAAATTCGTGCACTTGTGAAAGACTTTAAAGAATTTACTGT
AAACGTAAATGGTACGCAGTCAATTGAAAAAGCATTCGTTACTGGCGGCGGTGTATCTGTTAAAGAGATTAACCCAAAAG
AAATGTCTTCTAAATTCACGAACGGCTTATATTTCTGCGGGGAAGTTCTTGATATTCACGGTTATACTGGTGGCTATAAC
ATTACATCTGCTCTCGTTACTGGTAGAATCGCCGGAACAACAGCTGGAGAAAATGCAAAAATGCAATATTAA

Upstream 100 bases:

>100_bases
CACAATTCTCTCCTTAAGCAGTACTTCACTCTATTTTTCTTTTAAGGGAAAACATGCTATTCTTTTAGGCAGGAAATGTA
GAAAATGAGGTCGATATATT

Downstream 100 bases:

>100_bases
ACTGAGAAACAGGGATTCCTGTTTCTTTTTTTATAGGTACATGAAATTATTATCGACGATTACGCAGATATATCAGCGAT
TCTGTAATTTTATCGGCGAT

Product: conserved hypothetical protein TIGR00275

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MHYDVIVIGGGPSGLMAAIGAAEEGASVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFNN
EDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVVLKTGEVLETNHVV
IAVGGKSVPQTGSTGDGYAWAKKAGHTITELFPTEVPILSNEPFIQDRSLQGLALRDVNLSVLNPKGKAIISHKMDMLFT
HFGLSGPAALRCSQFVVKALKKFKTNTVQMSIDALPEENSEQLFQRMLKQMKEDPKKGIKNVLKGYVPERYFLFLLERNE
IDGSEQAGQVSHEKIRALVKDFKEFTVNVNGTQSIEKAFVTGGGVSVKEINPKEMSSKFTNGLYFCGEVLDIHGYTGGYN
ITSALVTGRIAGTTAGENAKMQY

Sequences:

>Translated_423_residues
MHYDVIVIGGGPSGLMAAIGAAEEGASVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFNN
EDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVVLKTGEVLETNHVV
IAVGGKSVPQTGSTGDGYAWAKKAGHTITELFPTEVPILSNEPFIQDRSLQGLALRDVNLSVLNPKGKAIISHKMDMLFT
HFGLSGPAALRCSQFVVKALKKFKTNTVQMSIDALPEENSEQLFQRMLKQMKEDPKKGIKNVLKGYVPERYFLFLLERNE
IDGSEQAGQVSHEKIRALVKDFKEFTVNVNGTQSIEKAFVTGGGVSVKEINPKEMSSKFTNGLYFCGEVLDIHGYTGGYN
ITSALVTGRIAGTTAGENAKMQY
>Mature_423_residues
MHYDVIVIGGGPSGLMAAIGAAEEGASVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFNN
EDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVVLKTGEVLETNHVV
IAVGGKSVPQTGSTGDGYAWAKKAGHTITELFPTEVPILSNEPFIQDRSLQGLALRDVNLSVLNPKGKAIISHKMDMLFT
HFGLSGPAALRCSQFVVKALKKFKTNTVQMSIDALPEENSEQLFQRMLKQMKEDPKKGIKNVLKGYVPERYFLFLLERNE
IDGSEQAGQVSHEKIRALVKDFKEFTVNVNGTQSIEKAFVTGGGVSVKEINPKEMSSKFTNGLYFCGEVLDIHGYTGGYN
ITSALVTGRIAGTTAGENAKMQY

Specific function: Unknown

COG id: COG2081

COG function: function code R; Predicted flavoproteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI2367234, Length=393, Percent_Identity=30.7888040712468, Blast_Score=160, Evalue=2e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004792
- InterPro:   IPR013027 [H]

Pfam domain/function: PF03486 HI0933_like [H]

EC number: NA

Molecular weight: Translated: 46142; Mature: 46142

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHYDVIVIGGGPSGLMAAIGAAEEGASVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEI
CCEEEEEECCCCHHHHHHHCCCCCCCEEEEEECCCCCCCEEEECCCCEEEECCCCCHHHH
VKHIPGNGRFLYSAFSIFNNEDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRL
HHHCCCCCEEEEEEEHHHCCCCCEEEHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHH
KDLGVKIRTNTPVETIEYENGQTKAVVLKTGEVLETNHVVIAVGGKSVPQTGSTGDGYAW
HHCCEEEECCCCCEEEEECCCCEEEEEEECCCEEECCCEEEEECCCCCCCCCCCCCCCHH
AKKAGHTITELFPTEVPILSNEPFIQDRSLQGLALRDVNLSVLNPKGKAIISHKMDMLFT
HHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECEEEEECCCCCEEHHHHHHHHHH
HFGLSGPAALRCSQFVVKALKKFKTNTVQMSIDALPEENSEQLFQRMLKQMKEDPKKGIK
HCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCHHHHHH
NVLKGYVPERYFLFLLERNEIDGSEQAGQVSHEKIRALVKDFKEFTVNVNGTQSIEKAFV
HHHHHCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHEEECCCCHHHHHHHC
TGGGVSVKEINPKEMSSKFTNGLYFCGEVLDIHGYTGGYNITSALVTGRIAGTTAGENAK
CCCCEEEEECCHHHHHHHHCCCCEEEEEEEEECCCCCCCCHHHHHHHCCEECCCCCCCCC
MQY
CCC
>Mature Secondary Structure
MHYDVIVIGGGPSGLMAAIGAAEEGASVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEI
CCEEEEEECCCCHHHHHHHCCCCCCCEEEEEECCCCCCCEEEECCCCEEEECCCCCHHHH
VKHIPGNGRFLYSAFSIFNNEDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRL
HHHCCCCCEEEEEEEHHHCCCCCEEEHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHH
KDLGVKIRTNTPVETIEYENGQTKAVVLKTGEVLETNHVVIAVGGKSVPQTGSTGDGYAW
HHCCEEEECCCCCEEEEECCCCEEEEEEECCCEEECCCEEEEECCCCCCCCCCCCCCCHH
AKKAGHTITELFPTEVPILSNEPFIQDRSLQGLALRDVNLSVLNPKGKAIISHKMDMLFT
HHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECEEEEECCCCCEEHHHHHHHHHH
HFGLSGPAALRCSQFVVKALKKFKTNTVQMSIDALPEENSEQLFQRMLKQMKEDPKKGIK
HCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCHHHHHH
NVLKGYVPERYFLFLLERNEIDGSEQAGQVSHEKIRALVKDFKEFTVNVNGTQSIEKAFV
HHHHHCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHEEECCCCHHHHHHHC
TGGGVSVKEINPKEMSSKFTNGLYFCGEVLDIHGYTGGYNITSALVTGRIAGTTAGENAK
CCCCEEEEECCHHHHHHHHCCCCEEEEEEEEECCCCCCCCHHHHHHHCCEECCCCCCCCC
MQY
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]