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The map label for this gene is ytoP [H]

Identifier: 218905925

GI number: 218905925

Start: 4555538

End: 4556611

Strand: Reverse

Name: ytoP [H]

Synonym: BCAH820_4813

Alternate gene names: 218905925

Gene position: 4556611-4555538 (Counterclockwise)

Preceding gene: 218905927

Following gene: 218905924

Centisome position: 85.93

GC content: 40.5

Gene sequence:

>1074_bases
GTGAATAAAGAGACATTACAATTATTTCGTACGTTAACAGAATTACAAGGTGCATCAGGTTTTGAACATGATGTGCGCCG
TTTTATGAAGCAAGAATTAAGCAAATATGCAGATGAAATTGTACAAGACGGTTTAGGTAGCGTATTTGGTCTGAAAAAAG
GGGACGAAACTGGCCCGCGTGTTCTTGTAGCAGGTCATATGGATGAAGTAGGTTTCATGATTACGCAAATTACGAAAAAC
GGAATGCTTCGTTTTCAACCGTTAGGCGGCTGGTGGAGCCAAGTACTATTAGCGCAACGCGTACAAGTGATGACGAAGAA
TGGTCCTGTTATTGGGGTTGTTGGTTCTATCCCTCCTCATTTATTAAGTGACGCGCAACGTGCAAAACCGATGGATATAA
AAAACATGTTAATTGATATAGGTGCAGATAGCTATGAAGATGCGATTGAAATTGGTGTAAAACCAGGACAACAAATCGTA
CCAATCTGCCCATTTACGCCGATGGCAAACGAAAAGAAAATTATGGCGAAAGCTTGGGACAACCGTTACGGATGTGGTCT
TGCAATCGAATTACTAAAAGAATTAAAAGACGAAACATTACCAAACACATTATACTCTGGTGCGACTGTACAAGAAGAAG
TTGGTCTTCGCGGTGCACAAACTGCTGCAAATATGATTCAACCAGATATTTTCTATGCGCTTGATGCAAGTCCAGCAAAC
GATGCATCTGGTGACAAAACACAGTTCGGTCAATTAGGAAAAGGTGCTCTTCTTCGTATTTACGATCGTACGATGGTAAC
ACATAGAGGAATGCGTGAATTCATTTTAGATACAGCAGAAACACACAACATTCCGTACCAATACTTTATTTCACAAGGCG
GTACAGATGCGGGACGTGTACATACAAGTAACTCAGGTGTCCCATCAGCAGTAATTGGTGTTTGCGCACGTTACATTCAT
ACACATGCTTCTATTTTACATGTTGATGATTATGCAGCAGCAAAAGAGCTAATTACGAAGCTTGTAAGAGCAACAGATAA
AACGACGTTAGAGACAATTAAGAATAACGCGTAA

Upstream 100 bases:

>100_bases
ATAAAGCAAATACAGCTAAAAAAGAAGAAACTAGAAACATTTCGAAAATTTCGTTACAATAAAAGAGGTATTCTACTAAG
GTTTGAAAGAAGGGGACTTC

Downstream 100 bases:

>100_bases
GGAGGAAGGGCGAAAACCCCTTCTTTTTTTAGGTTGAATAGATGCTCGAACGATGTATTAAGATCCCGAGTATGAAGAGA
GAGGTAGGCTGTTTTGGTGT

Product: peptidase, M42 family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MNKETLQLFRTLTELQGASGFEHDVRRFMKQELSKYADEIVQDGLGSVFGLKKGDETGPRVLVAGHMDEVGFMITQITKN
GMLRFQPLGGWWSQVLLAQRVQVMTKNGPVIGVVGSIPPHLLSDAQRAKPMDIKNMLIDIGADSYEDAIEIGVKPGQQIV
PICPFTPMANEKKIMAKAWDNRYGCGLAIELLKELKDETLPNTLYSGATVQEEVGLRGAQTAANMIQPDIFYALDASPAN
DASGDKTQFGQLGKGALLRIYDRTMVTHRGMREFILDTAETHNIPYQYFISQGGTDAGRVHTSNSGVPSAVIGVCARYIH
THASILHVDDYAAAKELITKLVRATDKTTLETIKNNA

Sequences:

>Translated_357_residues
MNKETLQLFRTLTELQGASGFEHDVRRFMKQELSKYADEIVQDGLGSVFGLKKGDETGPRVLVAGHMDEVGFMITQITKN
GMLRFQPLGGWWSQVLLAQRVQVMTKNGPVIGVVGSIPPHLLSDAQRAKPMDIKNMLIDIGADSYEDAIEIGVKPGQQIV
PICPFTPMANEKKIMAKAWDNRYGCGLAIELLKELKDETLPNTLYSGATVQEEVGLRGAQTAANMIQPDIFYALDASPAN
DASGDKTQFGQLGKGALLRIYDRTMVTHRGMREFILDTAETHNIPYQYFISQGGTDAGRVHTSNSGVPSAVIGVCARYIH
THASILHVDDYAAAKELITKLVRATDKTTLETIKNNA
>Mature_357_residues
MNKETLQLFRTLTELQGASGFEHDVRRFMKQELSKYADEIVQDGLGSVFGLKKGDETGPRVLVAGHMDEVGFMITQITKN
GMLRFQPLGGWWSQVLLAQRVQVMTKNGPVIGVVGSIPPHLLSDAQRAKPMDIKNMLIDIGADSYEDAIEIGVKPGQQIV
PICPFTPMANEKKIMAKAWDNRYGCGLAIELLKELKDETLPNTLYSGATVQEEVGLRGAQTAANMIQPDIFYALDASPAN
DASGDKTQFGQLGKGALLRIYDRTMVTHRGMREFILDTAETHNIPYQYFISQGGTDAGRVHTSNSGVPSAVIGVCARYIH
THASILHVDDYAAAKELITKLVRATDKTTLETIKNNA

Specific function: Unknown

COG id: COG1363

COG function: function code G; Cellulase M and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M42 family [H]

Homologues:

Organism=Escherichia coli, GI1790332, Length=357, Percent_Identity=38.375350140056, Blast_Score=231, Evalue=6e-62,
Organism=Escherichia coli, GI1788727, Length=347, Percent_Identity=32.2766570605187, Blast_Score=192, Evalue=2e-50,
Organism=Escherichia coli, GI87082417, Length=355, Percent_Identity=29.2957746478873, Blast_Score=143, Evalue=1e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008007 [H]

Pfam domain/function: PF05343 Peptidase_M42 [H]

EC number: NA

Molecular weight: Translated: 39164; Mature: 39164

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKETLQLFRTLTELQGASGFEHDVRRFMKQELSKYADEIVQDGLGSVFGLKKGDETGPR
CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCE
VLVAGHMDEVGFMITQITKNGMLRFQPLGGWWSQVLLAQRVQVMTKNGPVIGVVGSIPPH
EEEECCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEECCCCHH
LLSDAQRAKPMDIKNMLIDIGADSYEDAIEIGVKPGQQIVPICPFTPMANEKKIMAKAWD
HHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHCC
NRYGCGLAIELLKELKDETLPNTLYSGATVQEEVGLRGAQTAANMIQPDIFYALDASPAN
CCCCCHHHHHHHHHHHHHCCCHHHHCCCCHHHHHCCCHHHHHHHHCCCCEEEEECCCCCC
DASGDKTQFGQLGKGALLRIYDRTMVTHRGMREFILDTAETHNIPYQYFISQGGTDAGRV
CCCCCHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEE
HTSNSGVPSAVIGVCARYIHTHASILHVDDYAAAKELITKLVRATDKTTLETIKNNA
ECCCCCCHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHHCCHHHHHHHHCCC
>Mature Secondary Structure
MNKETLQLFRTLTELQGASGFEHDVRRFMKQELSKYADEIVQDGLGSVFGLKKGDETGPR
CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCE
VLVAGHMDEVGFMITQITKNGMLRFQPLGGWWSQVLLAQRVQVMTKNGPVIGVVGSIPPH
EEEECCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEECCCCHH
LLSDAQRAKPMDIKNMLIDIGADSYEDAIEIGVKPGQQIVPICPFTPMANEKKIMAKAWD
HHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHCC
NRYGCGLAIELLKELKDETLPNTLYSGATVQEEVGLRGAQTAANMIQPDIFYALDASPAN
CCCCCHHHHHHHHHHHHHCCCHHHHCCCCHHHHHCCCHHHHHHHHCCCCEEEEECCCCCC
DASGDKTQFGQLGKGALLRIYDRTMVTHRGMREFILDTAETHNIPYQYFISQGGTDAGRV
CCCCCHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEE
HTSNSGVPSAVIGVCARYIHTHASILHVDDYAAAKELITKLVRATDKTTLETIKNNA
ECCCCCCHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHHCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]