Click here to switch to the map view.

The map label for this gene is yjdJ [H]

Identifier: 218905887

GI number: 218905887

Start: 4522164

End: 4522466

Strand: Direct

Name: yjdJ [H]

Synonym: BCAH820_4775

Alternate gene names: 218905887

Gene position: 4522164-4522466 (Clockwise)

Preceding gene: 218905885

Following gene: 218905893

Centisome position: 85.28

GC content: 29.37

Gene sequence:

>303_bases
TTGACAATAAACCAAATGGTTCAACTCGGAAGTTCATTTATGCTATTTATTACTTCCGCACTGATGAGTTGGTATCAGGG
AAGTAATTTAATAGATAATCCTGATGAATGGAAATATAGCGCTAAATTTACGAATTACTTTAAAGGCACCGTTTCAAATT
ACGAAGATATTTATCAAATCGATTTCTTTATATATGCAGCAAAATTTTATCCAACAGCATTTATCGTTATGCTCATTAGC
TTACTTTATATGCTTATATTAATTCTTTATACTCTATTTAAAAGAAAAGATCCGGCGATTTAA

Upstream 100 bases:

>100_bases
ATGTGATTTCCGTATGAACTCGAAAAGGAGATTACAACAAAAAGGTTACAGGCATATGAATACACGATATAATAACCATA
AAATAGGAGGTGGATTCTTT

Downstream 100 bases:

>100_bases
ATCCATACATAAAAACCCCGAATCATAAACTTTTCAGCCTACAATTCGGGGTACTATTTGTTTATATTCGTTTCTAATTA
GTAACGAATTAAGAAATATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 100; Mature: 99

Protein sequence:

>100_residues
MTINQMVQLGSSFMLFITSALMSWYQGSNLIDNPDEWKYSAKFTNYFKGTVSNYEDIYQIDFFIYAAKFYPTAFIVMLIS
LLYMLILILYTLFKRKDPAI

Sequences:

>Translated_100_residues
MTINQMVQLGSSFMLFITSALMSWYQGSNLIDNPDEWKYSAKFTNYFKGTVSNYEDIYQIDFFIYAAKFYPTAFIVMLIS
LLYMLILILYTLFKRKDPAI
>Mature_99_residues
TINQMVQLGSSFMLFITSALMSWYQGSNLIDNPDEWKYSAKFTNYFKGTVSNYEDIYQIDFFIYAAKFYPTAFIVMLISL
LYMLILILYTLFKRKDPAI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016508 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11792; Mature: 11661

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTINQMVQLGSSFMLFITSALMSWYQGSNLIDNPDEWKYSAKFTNYFKGTVSNYEDIYQI
CCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHH
DFFIYAAKFYPTAFIVMLISLLYMLILILYTLFKRKDPAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TINQMVQLGSSFMLFITSALMSWYQGSNLIDNPDEWKYSAKFTNYFKGTVSNYEDIYQI
CHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHH
DFFIYAAKFYPTAFIVMLISLLYMLILILYTLFKRKDPAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]