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The map label for this gene is yrdR [H]

Identifier: 218905881

GI number: 218905881

Start: 4517285

End: 4518229

Strand: Direct

Name: yrdR [H]

Synonym: BCAH820_4769

Alternate gene names: 218905881

Gene position: 4517285-4518229 (Clockwise)

Preceding gene: 218905872

Following gene: 218905883

Centisome position: 85.19

GC content: 38.84

Gene sequence:

>945_bases
TTGAACAAAAAACAAATGCTACTCGGATCTCTTCTATGCTTACTTGCCGTAACGGCTTGGGGATTTATGTTTCCTGTAAT
GGCAAACGCCTTACAGTTTATCGATCCGTTTTTCTTCACAACGATTCGCTATGGATCAGCAGCTATTATTTTTCTTATTT
TGTTATTAATGACCGAAGGGACAAAGTCACTCCACTTAGAAAAGAAAACTCTTTCATTACTCTTTTACGGAACAGTCGGT
TTCGCAGGATATGGTTTTCTCGTTTTCTACGGACAACAACTTGCCGGACCTTCCGGAGCCATCCATGCCGCGATGATTCA
GTCTCTTATGCCACTCATCGCTTTATTATTGCAGTGGATAACAAAAAATAAACGCCCACAAAACTACACATTCCTTTGTA
TGTTCGTTGCACTAATTGGTGTTATGCTTGTCATTTCAAAAGGAAATATTCACTTATTATTTGGAGCTGCCAGTCACCTC
TCAACAAATATACTTATGCTATGCGGCGTTACTTGCTGGGTCATTTATACAAACGGTGGTGCTAGTTTTCAATCTTGGTC
ACCACTGAGGTACACGACGTTAACTTGTTTATTTGGCTCAATATCACTCATCGTTATTGTCACTTTCTTTACTTACACAA
ACGTTATTACTGTACCATCACTACGTACAATTATGAACGTTCGTTTTGAACTTATATATATGTCGATTATTGCAGGCGTT
ATCGCAGTATTTTGCTGGAACGCAGGAAATCGCCATATTTCATCTATTAACGGCATATTATTTATGAATTTAGTTCCTGT
GCTTGCACTTATCGGCTCCATCTTTCGAGGTTATACAGTCGACAAAATTGAAGTTGCCGGAGCCTCATTAACAATTATCG
CGCTATTATGCAACAATTTATGGCAAAGAAAAGAAAGTACAAAAATCCCCACCTCCGTTCGTTAG

Upstream 100 bases:

>100_bases
ATAACTGTCATAAAAAATCAGTATTTCCTTCTATAAACAATTACTCTTTATACTTATTTCATCAACTTACTATAACGAAA
TGTAAAGGGGAAAGATACTC

Downstream 100 bases:

>100_bases
GTGGGGATTTTTCACATATGAACAGCCCTTGGCCATTCATAGTACATATTCGTTATACACAGTGTTTGTTCCATCCATTG
TTCAATTTCTTTCGTGTACA

Product: transporter, EamA family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MNKKQMLLGSLLCLLAVTAWGFMFPVMANALQFIDPFFFTTIRYGSAAIIFLILLLMTEGTKSLHLEKKTLSLLFYGTVG
FAGYGFLVFYGQQLAGPSGAIHAAMIQSLMPLIALLLQWITKNKRPQNYTFLCMFVALIGVMLVISKGNIHLLFGAASHL
STNILMLCGVTCWVIYTNGGASFQSWSPLRYTTLTCLFGSISLIVIVTFFTYTNVITVPSLRTIMNVRFELIYMSIIAGV
IAVFCWNAGNRHISSINGILFMNLVPVLALIGSIFRGYTVDKIEVAGASLTIIALLCNNLWQRKESTKIPTSVR

Sequences:

>Translated_314_residues
MNKKQMLLGSLLCLLAVTAWGFMFPVMANALQFIDPFFFTTIRYGSAAIIFLILLLMTEGTKSLHLEKKTLSLLFYGTVG
FAGYGFLVFYGQQLAGPSGAIHAAMIQSLMPLIALLLQWITKNKRPQNYTFLCMFVALIGVMLVISKGNIHLLFGAASHL
STNILMLCGVTCWVIYTNGGASFQSWSPLRYTTLTCLFGSISLIVIVTFFTYTNVITVPSLRTIMNVRFELIYMSIIAGV
IAVFCWNAGNRHISSINGILFMNLVPVLALIGSIFRGYTVDKIEVAGASLTIIALLCNNLWQRKESTKIPTSVR
>Mature_314_residues
MNKKQMLLGSLLCLLAVTAWGFMFPVMANALQFIDPFFFTTIRYGSAAIIFLILLLMTEGTKSLHLEKKTLSLLFYGTVG
FAGYGFLVFYGQQLAGPSGAIHAAMIQSLMPLIALLLQWITKNKRPQNYTFLCMFVALIGVMLVISKGNIHLLFGAASHL
STNILMLCGVTCWVIYTNGGASFQSWSPLRYTTLTCLFGSISLIVIVTFFTYTNVITVPSLRTIMNVRFELIYMSIIAGV
IAVFCWNAGNRHISSINGILFMNLVPVLALIGSIFRGYTVDKIEVAGASLTIIALLCNNLWQRKESTKIPTSVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 34690; Mature: 34690

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKQMLLGSLLCLLAVTAWGFMFPVMANALQFIDPFFFTTIRYGSAAIIFLILLLMTEG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
TKSLHLEKKTLSLLFYGTVGFAGYGFLVFYGQQLAGPSGAIHAAMIQSLMPLIALLLQWI
CHHHEEHHHHHHEEEEEHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
TKNKRPQNYTFLCMFVALIGVMLVISKGNIHLLFGAASHLSTNILMLCGVTCWVIYTNGG
HCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHCCEEEEEEECCC
ASFQSWSPLRYTTLTCLFGSISLIVIVTFFTYTNVITVPSLRTIMNVRFELIYMSIIAGV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCHHHHHHHHHHHHHHHHHHHHH
IAVFCWNAGNRHISSINGILFMNLVPVLALIGSIFRGYTVDKIEVAGASLTIIALLCNNL
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHH
WQRKESTKIPTSVR
HHCCCCCCCCCCCC
>Mature Secondary Structure
MNKKQMLLGSLLCLLAVTAWGFMFPVMANALQFIDPFFFTTIRYGSAAIIFLILLLMTEG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
TKSLHLEKKTLSLLFYGTVGFAGYGFLVFYGQQLAGPSGAIHAAMIQSLMPLIALLLQWI
CHHHEEHHHHHHEEEEEHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
TKNKRPQNYTFLCMFVALIGVMLVISKGNIHLLFGAASHLSTNILMLCGVTCWVIYTNGG
HCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHCCEEEEEEECCC
ASFQSWSPLRYTTLTCLFGSISLIVIVTFFTYTNVITVPSLRTIMNVRFELIYMSIIAGV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCHHHHHHHHHHHHHHHHHHHHH
IAVFCWNAGNRHISSINGILFMNLVPVLALIGSIFRGYTVDKIEVAGASLTIIALLCNNL
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHH
WQRKESTKIPTSVR
HHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9308178; 9384377 [H]