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The map label for this gene is ysmA [H]

Identifier: 218905739

GI number: 218905739

Start: 4382019

End: 4382465

Strand: Reverse

Name: ysmA [H]

Synonym: BCAH820_4627

Alternate gene names: 218905739

Gene position: 4382465-4382019 (Counterclockwise)

Preceding gene: 218905740

Following gene: 218905737

Centisome position: 82.65

GC content: 36.02

Gene sequence:

>447_bases
ATGAAGAGGATTTCTTATATTGAAGACTTTGAGCAATGGGAAAGTGGTTTTTCGTTTTACAACTCTGTAAAGGTTCGTTT
TGGTGAAGTAGATATGTTTGGACATGTAAATAATGTCGTTGCCTTTACCTATTTTGAAGAAGCACGTATCGCATTGTTTA
AAGAACTTGGATTTATGCAAGAATGGACGCATGAATCTTCAGAAACGATGATTGTTGTTGCGGATTTACAATGTAATTTT
ATTAAGCAAATATATTTTGATGAACAGTTGAAGGTGTATGTAAAGGCGGGATCAGTTGGGAATTCTTCATTAGATTTGCA
TTATATGGTGAAGAATGCAGAAGGAGAAGTTTGCTTAGTTGGTCGTGGAATGATGGTTCAAGCATCGAAAAAAACGGGAA
GAGGCGAACCGTGGCCTGAAGAGTGGAAGAAAAAATTACTACAATAA

Upstream 100 bases:

>100_bases
AAATATTGCCTCTTCATATCGAAGAGGCAATATTTATAACTTTATTTTTCTGTTTATTCTGTTTATTATTTTTATTCGAA
GGTGAAAAGGAGAGGGAACA

Downstream 100 bases:

>100_bases
TAGAGTGAAAGAAAAATAAGAGAGCAAAACGCTCTCTTATTTTTTGTATTCCATCGCTTCTTCTAATGTTAAATGATGTT
TATATATGTATGTAGCGTAT

Product: putative 4-hydroxybenzoyl-CoA thioesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MKRISYIEDFEQWESGFSFYNSVKVRFGEVDMFGHVNNVVAFTYFEEARIALFKELGFMQEWTHESSETMIVVADLQCNF
IKQIYFDEQLKVYVKAGSVGNSSLDLHYMVKNAEGEVCLVGRGMMVQASKKTGRGEPWPEEWKKKLLQ

Sequences:

>Translated_148_residues
MKRISYIEDFEQWESGFSFYNSVKVRFGEVDMFGHVNNVVAFTYFEEARIALFKELGFMQEWTHESSETMIVVADLQCNF
IKQIYFDEQLKVYVKAGSVGNSSLDLHYMVKNAEGEVCLVGRGMMVQASKKTGRGEPWPEEWKKKLLQ
>Mature_148_residues
MKRISYIEDFEQWESGFSFYNSVKVRFGEVDMFGHVNNVVAFTYFEEARIALFKELGFMQEWTHESSETMIVVADLQCNF
IKQIYFDEQLKVYVKAGSVGNSSLDLHYMVKNAEGEVCLVGRGMMVQASKKTGRGEPWPEEWKKKLLQ

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 17218; Mature: 17218

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRISYIEDFEQWESGFSFYNSVKVRFGEVDMFGHVNNVVAFTYFEEARIALFKELGFMQ
CCCCHHHHHHHHHHHHHHHHHEEEEEECCEEECCCCCCEEEEEEHHHHHHHHHHHHCHHH
EWTHESSETMIVVADLQCNFIKQIYFDEQLKVYVKAGSVGNSSLDLHYMVKNAEGEVCLV
HHCCCCCCEEEEEEECCHHHHHHHHCCCEEEEEEEECCCCCCCEEEEEEEECCCCCEEEE
GRGMMVQASKKTGRGEPWPEEWKKKLLQ
ECCEEEEECCCCCCCCCCCHHHHHHHCC
>Mature Secondary Structure
MKRISYIEDFEQWESGFSFYNSVKVRFGEVDMFGHVNNVVAFTYFEEARIALFKELGFMQ
CCCCHHHHHHHHHHHHHHHHHEEEEEECCEEECCCCCCEEEEEEHHHHHHHHHHHHCHHH
EWTHESSETMIVVADLQCNFIKQIYFDEQLKVYVKAGSVGNSSLDLHYMVKNAEGEVCLV
HHCCCCCCEEEEEEECCHHHHHHHHCCCEEEEEEEECCCCCCCEEEEEEEECCCCCEEEE
GRGMMVQASKKTGRGEPWPEEWKKKLLQ
ECCEEEEECCCCCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3114423; 8969504; 9384377 [H]