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The map label for this gene is ywdJ [H]

Identifier: 218905716

GI number: 218905716

Start: 4358988

End: 4360292

Strand: Reverse

Name: ywdJ [H]

Synonym: BCAH820_4604

Alternate gene names: 218905716

Gene position: 4360292-4358988 (Counterclockwise)

Preceding gene: 218905717

Following gene: 218905715

Centisome position: 82.23

GC content: 36.4

Gene sequence:

>1305_bases
ATGGAAGGGATGAAAAATTTGGACAATCAACATAACCAAAATCATATTATGGGAACTTTGCAATGGTTTATATTTTTATT
AGCGAATTCAATCGCACTACCAATTGTCGTTGGCGGATTATTTCATCTTACGACGGAAGAAATATTTTATTTAATGCAGC
GTACGTTTTTTGTAGTTGGTATATCTTCTTTTTTACAAGGGTGGCTTGGACATAGACTCCCAATTGCGGACGGACCAGCT
GGATCTTGGGTTGGCGTATTTACCGTACTTGCTTACGCAACGGCCGGACAAGATCAATTACATAGTACGTTGCAAATTTT
AGAATTAGGAATGATAATTTCCGGTGTTATTTTAATAGGATTAGGCGTAACAGGTTTTATCGGACGTATTTTATTTTTGT
TTACGCCGCTTGTGACAGGGACGTTTTTACTTTTATTATGCTTACAATTAAGCGGTGTATTTTTAAAAGGGATGTTAGGA
ATTACGGCTACTGCTTCTCAAATTGGTGGATTTACAGCGATAATTGCGTTTAGTATATTTCTTTTCGTTATTATACTATC
TAATTTTGGAAAAGGTTTTGTCAAAAGTTACGCGGTTTTAATAGGTTTAATTAGTGGGTGGATTCTTTTTCTAATTGCAG
GAAAAGTTACGATTCCATCTCAAGTAAATCATTTTGTGCAACTTCCGCAAATATTTGCTTGGGGGCTTCCGAAATGGAAT
ACAGGTATGGCAGTATCGAGTTTCGTTATGGTATGTATTTTAGTTTCGAATACAGTGGCAGCTATTATAGCAATTAATCA
AGCTACCATCCAAAAAGCGACTATTGAACAGAAACAGTTGAAGGATGGAACGTGGGTTGGAGGGATTTCACACATCATTT
CCTCCATATTTTCAACTGTAGGTGTCGTGCCATTACCGGCAACGGCAGGATTTATACGTTTAACGAAACAAAAAAATATA
CGTTCGTTCTTACTAGCATGTATGTTACTAGTCGTAATGTCGCTGTTTCCAAGTATTATTCGTTATTTAGCATCTTTACC
GTCCGCTGTTGCATCTGCGGTTTTAATGGCTTCTTTCGTACAGTTAATTGGAATTGGGTTAAATAATATAAAACAAGTGG
AGCTTAATGAAAGGAATGTAACAATTTTAGGTGTTGCAGTATTATTTGGCAGCGGCGTTATGTTTTTACCGTCTGAAGCA
CTACAATCATTGCCTTCTGTTATGCAATATATATTCGGGAATGGTTTATTTGTAGGTACTGTTGTAAGTATATTGCTAGA
ACAAATATGGCGCATCGGGAAATAA

Upstream 100 bases:

>100_bases
TTACACTGCAACATTTGGATACGGGAAGAAATCGAAAGGACAAAAAGAGTTGTTTCGAAAAGCTACGTAATAGTATAGCG
TGTATTTCTGTGTGAAATAT

Downstream 100 bases:

>100_bases
GTGGATACAAAGAGTGTACGCACTGTATAAAAGTCTAAAATAACATGTGAAATAAAGCCCATTTTCATTCACCACCCGCA
CATTTCGTTCATACAATATC

Product: xanthine/uracil permease family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MEGMKNLDNQHNQNHIMGTLQWFIFLLANSIALPIVVGGLFHLTTEEIFYLMQRTFFVVGISSFLQGWLGHRLPIADGPA
GSWVGVFTVLAYATAGQDQLHSTLQILELGMIISGVILIGLGVTGFIGRILFLFTPLVTGTFLLLLCLQLSGVFLKGMLG
ITATASQIGGFTAIIAFSIFLFVIILSNFGKGFVKSYAVLIGLISGWILFLIAGKVTIPSQVNHFVQLPQIFAWGLPKWN
TGMAVSSFVMVCILVSNTVAAIIAINQATIQKATIEQKQLKDGTWVGGISHIISSIFSTVGVVPLPATAGFIRLTKQKNI
RSFLLACMLLVVMSLFPSIIRYLASLPSAVASAVLMASFVQLIGIGLNNIKQVELNERNVTILGVAVLFGSGVMFLPSEA
LQSLPSVMQYIFGNGLFVGTVVSILLEQIWRIGK

Sequences:

>Translated_434_residues
MEGMKNLDNQHNQNHIMGTLQWFIFLLANSIALPIVVGGLFHLTTEEIFYLMQRTFFVVGISSFLQGWLGHRLPIADGPA
GSWVGVFTVLAYATAGQDQLHSTLQILELGMIISGVILIGLGVTGFIGRILFLFTPLVTGTFLLLLCLQLSGVFLKGMLG
ITATASQIGGFTAIIAFSIFLFVIILSNFGKGFVKSYAVLIGLISGWILFLIAGKVTIPSQVNHFVQLPQIFAWGLPKWN
TGMAVSSFVMVCILVSNTVAAIIAINQATIQKATIEQKQLKDGTWVGGISHIISSIFSTVGVVPLPATAGFIRLTKQKNI
RSFLLACMLLVVMSLFPSIIRYLASLPSAVASAVLMASFVQLIGIGLNNIKQVELNERNVTILGVAVLFGSGVMFLPSEA
LQSLPSVMQYIFGNGLFVGTVVSILLEQIWRIGK
>Mature_434_residues
MEGMKNLDNQHNQNHIMGTLQWFIFLLANSIALPIVVGGLFHLTTEEIFYLMQRTFFVVGISSFLQGWLGHRLPIADGPA
GSWVGVFTVLAYATAGQDQLHSTLQILELGMIISGVILIGLGVTGFIGRILFLFTPLVTGTFLLLLCLQLSGVFLKGMLG
ITATASQIGGFTAIIAFSIFLFVIILSNFGKGFVKSYAVLIGLISGWILFLIAGKVTIPSQVNHFVQLPQIFAWGLPKWN
TGMAVSSFVMVCILVSNTVAAIIAINQATIQKATIEQKQLKDGTWVGGISHIISSIFSTVGVVPLPATAGFIRLTKQKNI
RSFLLACMLLVVMSLFPSIIRYLASLPSAVASAVLMASFVQLIGIGLNNIKQVELNERNVTILGVAVLFGSGVMFLPSEA
LQSLPSVMQYIFGNGLFVGTVVSILLEQIWRIGK

Specific function: Unknown

COG id: COG2233

COG function: function code F; Xanthine/uracil permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xanthine/uracil permease family. Nucleobase:cation symporter-2 (NCS2) (TC 2.A.40) subfamily [H]

Homologues:

Organism=Escherichia coli, GI87081750, Length=427, Percent_Identity=25.2927400468384, Blast_Score=141, Evalue=6e-35,
Organism=Escherichia coli, GI87082181, Length=418, Percent_Identity=20.5741626794258, Blast_Score=74, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006042
- InterPro:   IPR006043 [H]

Pfam domain/function: PF00860 Xan_ur_permease [H]

EC number: NA

Molecular weight: Translated: 46839; Mature: 46839

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHCCCC
>Mature Secondary Structure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HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]