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The map label for this gene is pinE [C]

Identifier: 218905699

GI number: 218905699

Start: 4345323

End: 4346783

Strand: Reverse

Name: pinE [C]

Synonym: BCAH820_4587

Alternate gene names: 218905699

Gene position: 4346783-4345323 (Counterclockwise)

Preceding gene: 218905700

Following gene: 218905698

Centisome position: 81.97

GC content: 31.69

Gene sequence:

>1461_bases
ATGCAACAAATAAAAGCTTTTGAGTATAGTATGAAAAAACGTATAACAATCGATGAAGAATATGTAGATAAAGATGTTTC
TGCTCGAAAAAAAACATTGATGCAACGACCTGGTATGAATAAGTTAATGAAAGAAATCGAAGCTGGAGTTGTGGGTAGTA
TTATTGTTTATAAAAGAGATAGATTCGCGCGTAAGTTACAAGAGCATATGCAGTTATATCGTCTATTTCAAGAGTATGAT
ATTGATGTTTATTTTTCATCAGATAGTGAAGTGCAAATGAATTATTCGCCCATTGGTGAATACATTGAAGCGATTCTCGG
TTCTATATGTGAAAACGAAGGTTCACTGATTGCGCAGCGCATTCAAGAAACAAAGATTGCAAAGTTTTTGAGCGGAAAGT
ATGCAGGGAATTTACCCTATGGATATGAAAAAGGTGAACCGAATGCTGATGGGCAAGTGAATATTTTACAAGTATCACAT
GAAATTGAAGTAGTGAAAGAAATATATAACGCATTACTAAATAAAGAATGTAAAAGTATACAAGAATTGTGTAACGATCT
AAATGAAAAATATAAAACAGAAGAGACTAAAGATTGGGATCAATCTAAAGTTGTTAACATCGTAAAAAACCCTATTTATC
ACGGTTTGCGAGTGATGAACTTTGGAAGTAAAGAATATAAAAAAGCATACAAAAACATTAAAGTAGTTGAAAAAACAGAT
TGGGATATAGCCAATGAACAATTAGATAAAATGATTGTGAAGCGAGAGACTGGTAAGGAAACAATTCAATTTTTACTAGA
AAATATCCTTTATTGTCATGAATGTCAAAAGCCACTTATTGCAAAAAAACGTATGAGAAGTTATCAGGATTACTATATAT
ATGAGTGTAAAGAACATGACGTTTGTGTCGAAGCTGGGTATATAGAAGTAGAAATATTGAAACATGCAAAAACTTTTTTT
CATCGTCTATTGGATGAAAATTTTAATGAATTATATGAAAGAAGTACATATCAAAACGTACGAAAGATTAAAAAACTTAT
TGGAAGTCAGGAGATGATTATTAAGGGTGTGACGAAAAAAGTTGGTAAATTAATAGATCAGTGGCTGAATTGTCAAAAGA
TGCAACGAGAACATGAGGGAAATGATTGTGCGAAATGCCAAAGTAATCAACATATAGGAGAAATAAAGGAAGCAAATGAA
ATCTTAAAGAGTGAAAAAAGAAAGTTACAACATTTGGATATGCGGTTATATGAAATTAAGAATTTTAAAGAGAAAGCAAA
AGAATGGATAACTCATTTAGAGTGTCCAAAAGATATTTTGCTTCTTGAGAAAGAAGAACGAAAGCGTTTTTATCGTGACA
TGATCCATTGCATTCAGGTGGATTCGTGGGAATACCATATTGTGTTTAAGCATCCTTTTATGCTGATACAGGAGGTGCAT
CAAAATAGTGAAACAGTATAA

Upstream 100 bases:

>100_bases
CAAGTGCATATTGTAAGTAGAAAGGATGGTGATGCTGAAAATGAAAAAGACAATAGCTTATTACAGAAGTTCGACCGATC
TTCAAGAAAATTCGATTGAG

Downstream 100 bases:

>100_bases
TGAAATGCGCTTAGAAGACATTTTACAACCAGGAAAACGAGTTGCTTTCTATGCACGTTATTCTACGAAAGATCAAGGAT
ATGAAATGCAAAAGCATTCT

Product: DNA recombinase, putative

Products: NA

Alternate protein names: Resolvase Domain-Containing Protein; DNA Recombinase; Site-Specific Recombinase; Site-Specific DNA Recombinase; Cassette Chromosome Recombinase B; Site-Specific Recombinase Resolvase Family; Site-Specific RecombinaIVCA; Recombinase; Resolvase Domain; Site-Specific Recombinase For Integration And Excision; Phage Integrase; Integrase; Resolvase Family Integrase; DNA Integration/Recombination Protein

Number of amino acids: Translated: 486; Mature: 486

Protein sequence:

>486_residues
MQQIKAFEYSMKKRITIDEEYVDKDVSARKKTLMQRPGMNKLMKEIEAGVVGSIIVYKRDRFARKLQEHMQLYRLFQEYD
IDVYFSSDSEVQMNYSPIGEYIEAILGSICENEGSLIAQRIQETKIAKFLSGKYAGNLPYGYEKGEPNADGQVNILQVSH
EIEVVKEIYNALLNKECKSIQELCNDLNEKYKTEETKDWDQSKVVNIVKNPIYHGLRVMNFGSKEYKKAYKNIKVVEKTD
WDIANEQLDKMIVKRETGKETIQFLLENILYCHECQKPLIAKKRMRSYQDYYIYECKEHDVCVEAGYIEVEILKHAKTFF
HRLLDENFNELYERSTYQNVRKIKKLIGSQEMIIKGVTKKVGKLIDQWLNCQKMQREHEGNDCAKCQSNQHIGEIKEANE
ILKSEKRKLQHLDMRLYEIKNFKEKAKEWITHLECPKDILLLEKEERKRFYRDMIHCIQVDSWEYHIVFKHPFMLIQEVH
QNSETV

Sequences:

>Translated_486_residues
MQQIKAFEYSMKKRITIDEEYVDKDVSARKKTLMQRPGMNKLMKEIEAGVVGSIIVYKRDRFARKLQEHMQLYRLFQEYD
IDVYFSSDSEVQMNYSPIGEYIEAILGSICENEGSLIAQRIQETKIAKFLSGKYAGNLPYGYEKGEPNADGQVNILQVSH
EIEVVKEIYNALLNKECKSIQELCNDLNEKYKTEETKDWDQSKVVNIVKNPIYHGLRVMNFGSKEYKKAYKNIKVVEKTD
WDIANEQLDKMIVKRETGKETIQFLLENILYCHECQKPLIAKKRMRSYQDYYIYECKEHDVCVEAGYIEVEILKHAKTFF
HRLLDENFNELYERSTYQNVRKIKKLIGSQEMIIKGVTKKVGKLIDQWLNCQKMQREHEGNDCAKCQSNQHIGEIKEANE
ILKSEKRKLQHLDMRLYEIKNFKEKAKEWITHLECPKDILLLEKEERKRFYRDMIHCIQVDSWEYHIVFKHPFMLIQEVH
QNSETV
>Mature_486_residues
MQQIKAFEYSMKKRITIDEEYVDKDVSARKKTLMQRPGMNKLMKEIEAGVVGSIIVYKRDRFARKLQEHMQLYRLFQEYD
IDVYFSSDSEVQMNYSPIGEYIEAILGSICENEGSLIAQRIQETKIAKFLSGKYAGNLPYGYEKGEPNADGQVNILQVSH
EIEVVKEIYNALLNKECKSIQELCNDLNEKYKTEETKDWDQSKVVNIVKNPIYHGLRVMNFGSKEYKKAYKNIKVVEKTD
WDIANEQLDKMIVKRETGKETIQFLLENILYCHECQKPLIAKKRMRSYQDYYIYECKEHDVCVEAGYIEVEILKHAKTFF
HRLLDENFNELYERSTYQNVRKIKKLIGSQEMIIKGVTKKVGKLIDQWLNCQKMQREHEGNDCAKCQSNQHIGEIKEANE
ILKSEKRKLQHLDMRLYEIKNFKEKAKEWITHLECPKDILLLEKEERKRFYRDMIHCIQVDSWEYHIVFKHPFMLIQEVH
QNSETV

Specific function: This Protein Catalyzes The Inversion Of An 1800-Bp E.Coli DNA Fragment, The P Region, Which Can Exist In Either Orientation. The Function Of The Inversion Is Not Yet Clear. [C]

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57750; Mature: 57750

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQIKAFEYSMKKRITIDEEYVDKDVSARKKTLMQRPGMNKLMKEIEAGVVGSIIVYKRD
CCCHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHEEHHH
RFARKLQEHMQLYRLFQEYDIDVYFSSDSEVQMNYSPIGEYIEAILGSICENEGSLIAQR
HHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEECCCHHHHHHHHHHHHHHCCCHHHHHHH
IQETKIAKFLSGKYAGNLPYGYEKGEPNADGQVNILQVSHEIEVVKEIYNALLNKECKSI
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHH
QELCNDLNEKYKTEETKDWDQSKVVNIVKNPIYHGLRVMNFGSKEYKKAYKNIKVVEKTD
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHCCEEEECCC
WDIANEQLDKMIVKRETGKETIQFLLENILYCHECQKPLIAKKRMRSYQDYYIYECKEHD
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEECCCCC
VCVEAGYIEVEILKHAKTFFHRLLDENFNELYERSTYQNVRKIKKLIGSQEMIIKGVTKK
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
VGKLIDQWLNCQKMQREHEGNDCAKCQSNQHIGEIKEANEILKSEKRKLQHLDMRLYEIK
HHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NFKEKAKEWITHLECPKDILLLEKEERKRFYRDMIHCIQVDSWEYHIVFKHPFMLIQEVH
HHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHEECCCEEEEEECCHHHHHHHHH
QNSETV
HCCCCC
>Mature Secondary Structure
MQQIKAFEYSMKKRITIDEEYVDKDVSARKKTLMQRPGMNKLMKEIEAGVVGSIIVYKRD
CCCHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHEEHHH
RFARKLQEHMQLYRLFQEYDIDVYFSSDSEVQMNYSPIGEYIEAILGSICENEGSLIAQR
HHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEECCCHHHHHHHHHHHHHHCCCHHHHHHH
IQETKIAKFLSGKYAGNLPYGYEKGEPNADGQVNILQVSHEIEVVKEIYNALLNKECKSI
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHH
QELCNDLNEKYKTEETKDWDQSKVVNIVKNPIYHGLRVMNFGSKEYKKAYKNIKVVEKTD
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHCCEEEECCC
WDIANEQLDKMIVKRETGKETIQFLLENILYCHECQKPLIAKKRMRSYQDYYIYECKEHD
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEECCCCC
VCVEAGYIEVEILKHAKTFFHRLLDENFNELYERSTYQNVRKIKKLIGSQEMIIKGVTKK
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
VGKLIDQWLNCQKMQREHEGNDCAKCQSNQHIGEIKEANEILKSEKRKLQHLDMRLYEIK
HHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NFKEKAKEWITHLECPKDILLLEKEERKRFYRDMIHCIQVDSWEYHIVFKHPFMLIQEVH
HHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHEECCCEEEEEECCHHHHHHHHH
QNSETV
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA