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The map label for this gene is ysoA [H]

Identifier: 218905676

GI number: 218905676

Start: 4321928

End: 4322926

Strand: Reverse

Name: ysoA [H]

Synonym: BCAH820_4561

Alternate gene names: 218905676

Gene position: 4322926-4321928 (Counterclockwise)

Preceding gene: 218905677

Following gene: 218905675

Centisome position: 81.52

GC content: 34.43

Gene sequence:

>999_bases
ATGGATAAAAAAGAAAATACGGTCGTATTGTTTCCGCAGCTATCAGCGCGCTATATTGATGAAGGTTTTTTAGCACTGAA
AGAGCGGAAATTCGAAGATGCATTGCGCTGCTTTGAAATATTACGTCAGTATAATGCAGAAACGGAACAAACAGAACTAG
CTTCGGTTATTTGTTTGTTAGAATTAAAGCATATGGAAGAAGCGAAAGAGAAATGTGAACAGTTGCTGGAGACAGGAGCT
GTACTATTTGGTGATATTCTTGAAACGTATGTGACAATTTTAGTTCAAACAAATGATTATGAAGGCGTAATTGAAACCGT
TGAAAAAGTTTTGCAAACGAAAGATATAATGCCGGAACAAAAGGAAAAATTAGCACAGCTCGCTTTATTTGCAGAAGGTA
TGTTAAATGAAGTAGAGACGTCACTAGTCGATTCGAATTTTGAATTAGATGATTTTACTAATGAAATGTTTGGAGAAAAC
TTTGGGCAAAAGCTAAGAGCGATTCAGCAACTTTCGTTAAAAGACTTAGATCTTGCATTACCTGTTTTAAAGAAATTTTT
AGTAGACGAAAAACAGCACCCTTATTTGAAAACTTCTATTTTATATAAAATGATAGAAAATCAAATAGAAGAAGAGATAG
AGGTGGAAAAGTTTGGGAATACGATCAAGGTAATTCCGGCATTTACAGGTCATAATGAGGAGCAATCCGATAACATTATA
CATACATTATCAAGTCGATTAGAACAAAATTATCCTGATATATTTGATGCGATGGTTACATATTGGAAAGAGTTGCAAAT
TAGCGTTTTCCCATTCGCTCTATTAATGGATAAAGTGGAGATTTGGGCTGCTGTTTTAGAGAGAATTGGTAGAAAGCGTT
TCGGGTTGACTATTGATGAAGTAGAGCTTATGACTGCGTATAATATTGAATTAGAAGAGTTTCATATTGCCTATCAATGG
TTATTACGTATTGAAAGAGAAGGATATTTGCCCGTATAA

Upstream 100 bases:

>100_bases
TTCATATTTCAAACAAAGGGTTTTGAGATGTTGTGTTCTCATTACTCATTTGATATATTTACTTTAAAGATAATTAAAAT
CTAGAAAAAGAGGCGGACGT

Downstream 100 bases:

>100_bases
TTATGAAAAAGAATCGTTCAGTTCTTGAAACGAGCATATTCTATGTTATAATGTAAGGGTTGCAAAAGGCAGAAATCTGC
CTGTTTGTAAGAGAAGAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MDKKENTVVLFPQLSARYIDEGFLALKERKFEDALRCFEILRQYNAETEQTELASVICLLELKHMEEAKEKCEQLLETGA
VLFGDILETYVTILVQTNDYEGVIETVEKVLQTKDIMPEQKEKLAQLALFAEGMLNEVETSLVDSNFELDDFTNEMFGEN
FGQKLRAIQQLSLKDLDLALPVLKKFLVDEKQHPYLKTSILYKMIENQIEEEIEVEKFGNTIKVIPAFTGHNEEQSDNII
HTLSSRLEQNYPDIFDAMVTYWKELQISVFPFALLMDKVEIWAAVLERIGRKRFGLTIDEVELMTAYNIELEEFHIAYQW
LLRIEREGYLPV

Sequences:

>Translated_332_residues
MDKKENTVVLFPQLSARYIDEGFLALKERKFEDALRCFEILRQYNAETEQTELASVICLLELKHMEEAKEKCEQLLETGA
VLFGDILETYVTILVQTNDYEGVIETVEKVLQTKDIMPEQKEKLAQLALFAEGMLNEVETSLVDSNFELDDFTNEMFGEN
FGQKLRAIQQLSLKDLDLALPVLKKFLVDEKQHPYLKTSILYKMIENQIEEEIEVEKFGNTIKVIPAFTGHNEEQSDNII
HTLSSRLEQNYPDIFDAMVTYWKELQISVFPFALLMDKVEIWAAVLERIGRKRFGLTIDEVELMTAYNIELEEFHIAYQW
LLRIEREGYLPV
>Mature_332_residues
MDKKENTVVLFPQLSARYIDEGFLALKERKFEDALRCFEILRQYNAETEQTELASVICLLELKHMEEAKEKCEQLLETGA
VLFGDILETYVTILVQTNDYEGVIETVEKVLQTKDIMPEQKEKLAQLALFAEGMLNEVETSLVDSNFELDDFTNEMFGEN
FGQKLRAIQQLSLKDLDLALPVLKKFLVDEKQHPYLKTSILYKMIENQIEEEIEVEKFGNTIKVIPAFTGHNEEQSDNII
HTLSSRLEQNYPDIFDAMVTYWKELQISVFPFALLMDKVEIWAAVLERIGRKRFGLTIDEVELMTAYNIELEEFHIAYQW
LLRIEREGYLPV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006822
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF04733 Coatomer_E [H]

EC number: NA

Molecular weight: Translated: 38700; Mature: 38700

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKKENTVVLFPQLSARYIDEGFLALKERKFEDALRCFEILRQYNAETEQTELASVICLL
CCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
ELKHMEEAKEKCEQLLETGAVLFGDILETYVTILVQTNDYEGVIETVEKVLQTKDIMPEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHH
KEKLAQLALFAEGMLNEVETSLVDSNFELDDFTNEMFGENFGQKLRAIQQLSLKDLDLAL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PVLKKFLVDEKQHPYLKTSILYKMIENQIEEEIEVEKFGNTIKVIPAFTGHNEEQSDNII
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHH
HTLSSRLEQNYPDIFDAMVTYWKELQISVFPFALLMDKVEIWAAVLERIGRKRFGLTIDE
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHH
VELMTAYNIELEEFHIAYQWLLRIEREGYLPV
HHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MDKKENTVVLFPQLSARYIDEGFLALKERKFEDALRCFEILRQYNAETEQTELASVICLL
CCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
ELKHMEEAKEKCEQLLETGAVLFGDILETYVTILVQTNDYEGVIETVEKVLQTKDIMPEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHH
KEKLAQLALFAEGMLNEVETSLVDSNFELDDFTNEMFGENFGQKLRAIQQLSLKDLDLAL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PVLKKFLVDEKQHPYLKTSILYKMIENQIEEEIEVEKFGNTIKVIPAFTGHNEEQSDNII
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHH
HTLSSRLEQNYPDIFDAMVTYWKELQISVFPFALLMDKVEIWAAVLERIGRKRFGLTIDE
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHH
VELMTAYNIELEEFHIAYQWLLRIEREGYLPV
HHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]