Click here to switch to the map view.

The map label for this gene is comEA [H]

Identifier: 218905464

GI number: 218905464

Start: 4133331

End: 4133927

Strand: Reverse

Name: comEA [H]

Synonym: BCAH820_4349

Alternate gene names: 218905464

Gene position: 4133927-4133331 (Counterclockwise)

Preceding gene: 218905466

Following gene: 218905463

Centisome position: 77.96

GC content: 38.02

Gene sequence:

>597_bases
ATGTGGGATTTTCCAAAGAAATGGTTAGGACTAGTAGCTATTATTGGGATTGTACTTTTTCTTCTTTTTTGGAAAACGAA
CGAGCATACAGAGCGCTCGGTCATTACAACGGATGTTCAAGCGAAAGAGATAGAGAAAAAAAGTAAACCGAAAATATCGG
ATACAAAGCTGCAGAAAAAAATAATTGTAATTGATATGAAAGGGGCTGTTGTTAAAGAGGGAGTATATGAAATGAAAGAA
GGAGACCGGGTCAAGGATGCCATTGAGAAGGCAGGTGGTTTTTTACCCGAGGCAGATAGGAAAAAGGTAAATTTAGCGCA
AGTGGTACAAGACCAAATGGTCCTTTATGTGCCGGATAAAAATGAACAAGTGCAGGAAGGGGCTGCTGTTTCAAAGGGGG
AGGAGAAAGTTCGAATAAATGCAGCTTCTAAAGAACAACTTGAAAAAATTACAGGTATCGGTTCTAGGAAAGCAGAAAGT
ATTTTGAAATATCGTGAGGGACATGGTCCGTTTCAGAAAATAGAAGATTTGTTAGAGATTGATGGGATTGGTGTGAAGTC
TCTGGAAAAAATAAAAGATCAAATTATTATTCCGTAA

Upstream 100 bases:

>100_bases
CCTATAATTCCTATGTTCAATGTTTCATCCCTCCTTCGTAACAGCTTTCTCCTAAACAATATGAATGATGTTATAAATTT
ATGATTAGAGGTGTAAAATG

Downstream 100 bases:

>100_bases
AAGATTGACGAAGTTTTTCTTCATTCGCTACACTACAAGTAGACAAAAAAGTAGGTGAAGAATATGGAACGAATTTCATG
GGATCAATATTTTATGACGC

Product: comE operon protein 1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MWDFPKKWLGLVAIIGIVLFLLFWKTNEHTERSVITTDVQAKEIEKKSKPKISDTKLQKKIIVIDMKGAVVKEGVYEMKE
GDRVKDAIEKAGGFLPEADRKKVNLAQVVQDQMVLYVPDKNEQVQEGAAVSKGEEKVRINAASKEQLEKITGIGSRKAES
ILKYREGHGPFQKIEDLLEIDGIGVKSLEKIKDQIIIP

Sequences:

>Translated_198_residues
MWDFPKKWLGLVAIIGIVLFLLFWKTNEHTERSVITTDVQAKEIEKKSKPKISDTKLQKKIIVIDMKGAVVKEGVYEMKE
GDRVKDAIEKAGGFLPEADRKKVNLAQVVQDQMVLYVPDKNEQVQEGAAVSKGEEKVRINAASKEQLEKITGIGSRKAES
ILKYREGHGPFQKIEDLLEIDGIGVKSLEKIKDQIIIP
>Mature_198_residues
MWDFPKKWLGLVAIIGIVLFLLFWKTNEHTERSVITTDVQAKEIEKKSKPKISDTKLQKKIIVIDMKGAVVKEGVYEMKE
GDRVKDAIEKAGGFLPEADRKKVNLAQVVQDQMVLYVPDKNEQVQEGAAVSKGEEKVRINAASKEQLEKITGIGSRKAES
ILKYREGHGPFQKIEDLLEIDGIGVKSLEKIKDQIIIP

Specific function: Needed for both DNA binding and transport. It is absolutely required for the uptake of transforming DNA but not for binding. Its role in binding may be indirect [H]

COG id: COG1555

COG function: function code L; DNA uptake protein and related DNA-binding proteins

Gene ontology:

Cell location: Cell membrane; Single-pass type II membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 HhH domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004787
- InterPro:   IPR004509
- InterPro:   IPR000445
- InterPro:   IPR003583
- InterPro:   IPR010994
- InterPro:   IPR019554 [H]

Pfam domain/function: PF00633 HHH; PF10531 SLBB [H]

EC number: NA

Molecular weight: Translated: 22296; Mature: 22296

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWDFPKKWLGLVAIIGIVLFLLFWKTNEHTERSVITTDVQAKEIEKKSKPKISDTKLQKK
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHCCCCCCHHHHHCE
IIVIDMKGAVVKEGVYEMKEGDRVKDAIEKAGGFLPEADRKKVNLAQVVQDQMVLYVPDK
EEEEECCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCEEEEECCC
NEQVQEGAAVSKGEEKVRINAASKEQLEKITGIGSRKAESILKYREGHGPFQKIEDLLEI
CCHHHHCCCCCCCCCEEEEECCCHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
DGIGVKSLEKIKDQIIIP
CCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MWDFPKKWLGLVAIIGIVLFLLFWKTNEHTERSVITTDVQAKEIEKKSKPKISDTKLQKK
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHCCCCCCHHHHHCE
IIVIDMKGAVVKEGVYEMKEGDRVKDAIEKAGGFLPEADRKKVNLAQVVQDQMVLYVPDK
EEEEECCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCEEEEECCC
NEQVQEGAAVSKGEEKVRINAASKEQLEKITGIGSRKAESILKYREGHGPFQKIEDLLEI
CCHHHHCCCCCCCCCEEEEECCCHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
DGIGVKSLEKIKDQIIIP
CCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7968523; 8969508; 9384377; 7768800 [H]