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The map label for this gene is yqfF [H]

Identifier: 218905441

GI number: 218905441

Start: 4108855

End: 4110999

Strand: Reverse

Name: yqfF [H]

Synonym: BCAH820_4326

Alternate gene names: 218905441

Gene position: 4110999-4108855 (Counterclockwise)

Preceding gene: 218905442

Following gene: 218905440

Centisome position: 77.53

GC content: 34.13

Gene sequence:

>2145_bases
ATGTTAAGATCTCAAGAAATTTCTAAGTGGTTTCGTAATTTACAACATTCGAAAAAACTAAGTTGGATTTCTTACGTTTT
ATTAGGAGCAGTGCTGTTTTTTGCACTTATGAATAATGTGAAACCAGAGCAATTAGATGTTGATATGTATTCTATTGCGA
AAAAAACAATTCATTCTCCTATTAAAATTGAAGATAAGGTTATAACGGAAAGGAAAAAACAAGAGGCCGCTCAAAAAGTT
GGGGATCAATATACATATAGAAGTGAATATAAACAAAATAGAGTAGATATTGTAAATGATGTTTTTGCTAAGGTAAATGA
AGTAATTCAGGAGATGAAAGCTGCTGGACCTGAAGAGCAAAAAAAGATGACCGATGCTAATAAATTAGAAAAGTTGAAGA
AGAAGTTGCCATCTAATTTAACAAAGGAATTATCTGATGAAAATTTATTGTACTTTATTAATGCAGAACCAGATCAATTA
GAATTAGCAAAGAATGCGGCTTTAACGTCTGTTAGTGTTATTATGGGTGGAAATATTAAAATGTCCGAAGAAATGGCAGC
GAAAGAGCGATTTGTTAATGAAATGAAAACCCTTAATGTGAATAGCGGATTGAAGGAAGCTGTTAATGCGTTAGGATCAT
ATGCGATTACAGCAAATTATTTTTATGATCCAGCTGTAACGAAAGAGAAGAAGAAAGCGGAAGAAGATTTAGTTCCACCT
GTTTATATTCTTCAAGGACAAGTTATTGTTAGAGAAGGTGAAACAATTTCAAGTGATATGTATAATCAGTTGAAATTGGT
CGGTTTATTAGAGAAAGGTAATAGTTTTCAGCCTTATGTTGGATTAGCTGTGCTTATTGGTGTGTTACTATACTTTATGC
ATAAGCAGTTTGAAGTATTTTTACAGCGGAAAAGAGAAGATAGACCGTACATTTTAGCGTATATCACAATTTTGTCTATC
ACGATTGTTTTAATGAAAATTATTAGTTTGTTTCAAAAGCTTGAATATGCAGGAATTGCGTATGTTGTCCCAGTTGCGAT
GGGAACAATACTTGTAAAACTAATGATTGGCGATCGATTTGTATTTTTAACAAGTATGATTTTTTCTGTGTGCGGAAGTA
TTATGTTTAATGAAGGAGTAACAAGTACACTAAATTATAGTGTAGGTATTTATGTGTTATTAAGTTCATTATCAGTGAGT
ATTTTCTTAAGAGAAAAAAATCGTCGTACGATGATCTTACAAGCTGGTATACTCGTTTCTATCTTAAATGTAGTCGTCTT
GGCGGCGTTATTATTATTACGCAATGGGAATTTTTCACCTCTTGAAATTGGTACGCAATTATTAATGGCTTCCCTTTCAG
GCATTATCTCATCCGTTTTGGCTATGGGAATATTACCATATTTAGAAAGTGGACTTGGAATTGTATCAAGTATGAAGCTT
ATGGAATTATCAAGTCCAAATCATCCGCTTTTGCGTAGAATTTTGTTAGAAGCGCCAGGAACATATCACCATAGTGTAAT
GGTAGCTAATCTTTCTGAGGCAGCTTGTGAAGCGGTTGGAGCAAATGGTGTATTAGCGCGTGTAGGGGCGTATTATCATG
ATGTAGGAAAAACAGTACAACCGCAATTCTTTATTGAAAACCAGATGGGAATTGAAAATCCACATGATAAATTAGATCCT
GTGACGAGTAAAGATATTATTATTGCTCATGTAACCGATGGAGTAAAAATGCTCGAAGAATACCATATTCCACAAGAAAT
TATCGATATCGCTGGACAACACCATGGTACAACGCTCCTTAAATATTTTTATTATAAGGCGATTAAAGAAGATAAAGAAA
AATATACAGAAGAGATGTTCCGTTATCCGGGATCAAAAGCAACTTCTAAAGAATCGGCAATCGTTGGTATCGCGGATAGT
GTTGAGGCGGCGGTACGTTCTATGAATCACCCAACGCCAGATCAAATTAATAATTTAGTGCAAAGTATTATTAAAGATCG
TTTGCAAGATGGGCAATTTAGTGAATGTGATTTGACATTTAAGGAACTACAAATTGTTGGAAAAACGTTATGTGAAACGT
TAAATGGTATTTTCCATTCGCGTATTACATATCCGGAGCCACCGGAAGAGAAGGAGAAAGAATGA

Upstream 100 bases:

>100_bases
CCGGTGTATAAAAATGTTACCTAAAAGTATCGTTGGCTAGAAGAAATGAAAGCTATAAATAGTTTCACTTTATTTCTGGA
GAGGAGAAGGTATTGAAATC

Downstream 100 bases:

>100_bases
GTTTATTAATTGATTTTATTGATGAAACAGAAGAAGTGAAAGAAGAATATGTGAATTTAATTCGTGAAATATTAGGAAAA
GCAGCTCAAATGGAAAAAAT

Product: HDIG domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 714; Mature: 714

Protein sequence:

>714_residues
MLRSQEISKWFRNLQHSKKLSWISYVLLGAVLFFALMNNVKPEQLDVDMYSIAKKTIHSPIKIEDKVITERKKQEAAQKV
GDQYTYRSEYKQNRVDIVNDVFAKVNEVIQEMKAAGPEEQKKMTDANKLEKLKKKLPSNLTKELSDENLLYFINAEPDQL
ELAKNAALTSVSVIMGGNIKMSEEMAAKERFVNEMKTLNVNSGLKEAVNALGSYAITANYFYDPAVTKEKKKAEEDLVPP
VYILQGQVIVREGETISSDMYNQLKLVGLLEKGNSFQPYVGLAVLIGVLLYFMHKQFEVFLQRKREDRPYILAYITILSI
TIVLMKIISLFQKLEYAGIAYVVPVAMGTILVKLMIGDRFVFLTSMIFSVCGSIMFNEGVTSTLNYSVGIYVLLSSLSVS
IFLREKNRRTMILQAGILVSILNVVVLAALLLLRNGNFSPLEIGTQLLMASLSGIISSVLAMGILPYLESGLGIVSSMKL
MELSSPNHPLLRRILLEAPGTYHHSVMVANLSEAACEAVGANGVLARVGAYYHDVGKTVQPQFFIENQMGIENPHDKLDP
VTSKDIIIAHVTDGVKMLEEYHIPQEIIDIAGQHHGTTLLKYFYYKAIKEDKEKYTEEMFRYPGSKATSKESAIVGIADS
VEAAVRSMNHPTPDQINNLVQSIIKDRLQDGQFSECDLTFKELQIVGKTLCETLNGIFHSRITYPEPPEEKEKE

Sequences:

>Translated_714_residues
MLRSQEISKWFRNLQHSKKLSWISYVLLGAVLFFALMNNVKPEQLDVDMYSIAKKTIHSPIKIEDKVITERKKQEAAQKV
GDQYTYRSEYKQNRVDIVNDVFAKVNEVIQEMKAAGPEEQKKMTDANKLEKLKKKLPSNLTKELSDENLLYFINAEPDQL
ELAKNAALTSVSVIMGGNIKMSEEMAAKERFVNEMKTLNVNSGLKEAVNALGSYAITANYFYDPAVTKEKKKAEEDLVPP
VYILQGQVIVREGETISSDMYNQLKLVGLLEKGNSFQPYVGLAVLIGVLLYFMHKQFEVFLQRKREDRPYILAYITILSI
TIVLMKIISLFQKLEYAGIAYVVPVAMGTILVKLMIGDRFVFLTSMIFSVCGSIMFNEGVTSTLNYSVGIYVLLSSLSVS
IFLREKNRRTMILQAGILVSILNVVVLAALLLLRNGNFSPLEIGTQLLMASLSGIISSVLAMGILPYLESGLGIVSSMKL
MELSSPNHPLLRRILLEAPGTYHHSVMVANLSEAACEAVGANGVLARVGAYYHDVGKTVQPQFFIENQMGIENPHDKLDP
VTSKDIIIAHVTDGVKMLEEYHIPQEIIDIAGQHHGTTLLKYFYYKAIKEDKEKYTEEMFRYPGSKATSKESAIVGIADS
VEAAVRSMNHPTPDQINNLVQSIIKDRLQDGQFSECDLTFKELQIVGKTLCETLNGIFHSRITYPEPPEEKEKE
>Mature_714_residues
MLRSQEISKWFRNLQHSKKLSWISYVLLGAVLFFALMNNVKPEQLDVDMYSIAKKTIHSPIKIEDKVITERKKQEAAQKV
GDQYTYRSEYKQNRVDIVNDVFAKVNEVIQEMKAAGPEEQKKMTDANKLEKLKKKLPSNLTKELSDENLLYFINAEPDQL
ELAKNAALTSVSVIMGGNIKMSEEMAAKERFVNEMKTLNVNSGLKEAVNALGSYAITANYFYDPAVTKEKKKAEEDLVPP
VYILQGQVIVREGETISSDMYNQLKLVGLLEKGNSFQPYVGLAVLIGVLLYFMHKQFEVFLQRKREDRPYILAYITILSI
TIVLMKIISLFQKLEYAGIAYVVPVAMGTILVKLMIGDRFVFLTSMIFSVCGSIMFNEGVTSTLNYSVGIYVLLSSLSVS
IFLREKNRRTMILQAGILVSILNVVVLAALLLLRNGNFSPLEIGTQLLMASLSGIISSVLAMGILPYLESGLGIVSSMKL
MELSSPNHPLLRRILLEAPGTYHHSVMVANLSEAACEAVGANGVLARVGAYYHDVGKTVQPQFFIENQMGIENPHDKLDP
VTSKDIIIAHVTDGVKMLEEYHIPQEIIDIAGQHHGTTLLKYFYYKAIKEDKEKYTEEMFRYPGSKATSKESAIVGIADS
VEAAVRSMNHPTPDQINNLVQSIIKDRLQDGQFSECDLTFKELQIVGKTLCETLNGIFHSRITYPEPPEEKEKE

Specific function: Unknown

COG id: COG1480

COG function: function code R; Predicted membrane-associated HD superfamily hydrolase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011624
- InterPro:   IPR011621
- InterPro:   IPR003607
- InterPro:   IPR006675 [H]

Pfam domain/function: PF07698 7TM-7TMR_HD; PF07697 7TMR-HDED [H]

EC number: NA

Molecular weight: Translated: 80117; Mature: 80117

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRSQEISKWFRNLQHSKKLSWISYVLLGAVLFFALMNNVKPEQLDVDMYSIAKKTIHSP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHCCC
IKIEDKVITERKKQEAAQKVGDQYTYRSEYKQNRVDIVNDVFAKVNEVIQEMKAAGPEEQ
CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
KKMTDANKLEKLKKKLPSNLTKELSDENLLYFINAEPDQLELAKNAALTSVSVIMGGNIK
HHHCCHHHHHHHHHHCCCHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHEEECCCCE
MSEEMAAKERFVNEMKTLNVNSGLKEAVNALGSYAITANYFYDPAVTKEKKKAEEDLVPP
EHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHCCCC
VYILQGQVIVREGETISSDMYNQLKLVGLLEKGNSFQPYVGLAVLIGVLLYFMHKQFEVF
EEEEECEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LQRKREDRPYILAYITILSITIVLMKIISLFQKLEYAGIAYVVPVAMGTILVKLMIGDRF
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHH
VFLTSMIFSVCGSIMFNEGVTSTLNYSVGIYVLLSSLSVSIFLREKNRRTMILQAGILVS
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCEEEEHHHHHHH
ILNVVVLAALLLLRNGNFSPLEIGTQLLMASLSGIISSVLAMGILPYLESGLGIVSSMKL
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
MELSSPNHPLLRRILLEAPGTYHHSVMVANLSEAACEAVGANGVLARVGAYYHDVGKTVQ
HHCCCCCHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC
PQFFIENQMGIENPHDKLDPVTSKDIIIAHVTDGVKMLEEYHIPQEIIDIAGQHHGTTLL
CCEEECCCCCCCCCCHHCCCCCCCCEEEEEECHHHHHHHHHCCCHHHHHHCCCCCHHHHH
KYFYYKAIKEDKEKYTEEMFRYPGSKATSKESAIVGIADSVEAAVRSMNHPTPDQINNLV
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCCHHHHHHHH
QSIIKDRLQDGQFSECDLTFKELQIVGKTLCETLNGIFHSRITYPEPPEEKEKE
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLRSQEISKWFRNLQHSKKLSWISYVLLGAVLFFALMNNVKPEQLDVDMYSIAKKTIHSP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHCCC
IKIEDKVITERKKQEAAQKVGDQYTYRSEYKQNRVDIVNDVFAKVNEVIQEMKAAGPEEQ
CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
KKMTDANKLEKLKKKLPSNLTKELSDENLLYFINAEPDQLELAKNAALTSVSVIMGGNIK
HHHCCHHHHHHHHHHCCCHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHEEECCCCE
MSEEMAAKERFVNEMKTLNVNSGLKEAVNALGSYAITANYFYDPAVTKEKKKAEEDLVPP
EHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHCCCC
VYILQGQVIVREGETISSDMYNQLKLVGLLEKGNSFQPYVGLAVLIGVLLYFMHKQFEVF
EEEEECEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LQRKREDRPYILAYITILSITIVLMKIISLFQKLEYAGIAYVVPVAMGTILVKLMIGDRF
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHH
VFLTSMIFSVCGSIMFNEGVTSTLNYSVGIYVLLSSLSVSIFLREKNRRTMILQAGILVS
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCEEEEHHHHHHH
ILNVVVLAALLLLRNGNFSPLEIGTQLLMASLSGIISSVLAMGILPYLESGLGIVSSMKL
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
MELSSPNHPLLRRILLEAPGTYHHSVMVANLSEAACEAVGANGVLARVGAYYHDVGKTVQ
HHCCCCCHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC
PQFFIENQMGIENPHDKLDPVTSKDIIIAHVTDGVKMLEEYHIPQEIIDIAGQHHGTTLL
CCEEECCCCCCCCCCHHCCCCCCCCEEEEEECHHHHHHHHHCCCHHHHHHCCCCCHHHHH
KYFYYKAIKEDKEKYTEEMFRYPGSKATSKESAIVGIADSVEAAVRSMNHPTPDQINNLV
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCCHHHHHHHH
QSIIKDRLQDGQFSECDLTFKELQIVGKTLCETLNGIFHSRITYPEPPEEKEKE
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]