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The map label for this gene is ctaC [H]

Identifier: 218905075

GI number: 218905075

Start: 3795861

End: 3796910

Strand: Reverse

Name: ctaC [H]

Synonym: BCAH820_3959

Alternate gene names: 218905075

Gene position: 3796910-3795861 (Counterclockwise)

Preceding gene: 218905076

Following gene: 218905074

Centisome position: 71.6

GC content: 36.1

Gene sequence:

>1050_bases
ATGAAGAAACAGTGGCGACTGCTTTCGTTCGTTTCACTGCTGGCTTTACTGTTAGGGGGATGCGGTAAAGCCTTTCAATC
TACTTTAATTCCGCAAGGAGAAGTAGCAAAAATGCAATATGATCTGCTCTTACTAGCAAGTGCAATCATGGTAGGAGTAG
TACTAGTAGTTACTATTATTTTCTTATATGTAATTGTGCGTTTCCGACAAAAGAAAGGTCAGGAAGATTATATTCCAGAG
CAAGTTGAAGGAAATCACAAACTAGAAATTATATGGACAGTTATTCCGATTATTCTTTTGTTAATCTTAGCTGTTCCGAC
GGTTACATATACATTCAAACTTGCTGATGTAAGTGCGATGGAGAAAAAGAATATTGATAAAGATACTATCGTTGTTGATG
TAACAGCGAATCTTTATTGGTGGGAATTTTCTTATAAATCAGAAAAGATAGTAACTTCTCAAGATTTAGTTATCCCCACA
GGTAAGAAAGTGTATTTGAATTTGAAGGGTGCCGATATTAAACATTCGTTTTGGGTTCCATCTTTAGCTGGGAAAATGGA
TACAAATACAGATAATGTGAACAAAATGTGGTTAAAGGCAGATAAATCGGGCACTTATAATGGTTTTTGTACAGAATTTT
GCGGCCCATCACATTCTTTAATGCAATTCAAAGTGAAAGCTTTAGATGAAAGCGAGTACAAAAAATGGCTTGCTGATATG
AAGAAAATTGATGGGAAGAAAGAAGTAGCTTCAACAAAGGCGCAAGAGGGCCAAGAAATATTTAATAAAAGCTGTATTGG
TTGTCACGCAGTTGGATCTAATGATAGTAGACCACCTTCCGCTCGTATCGCACCAAACTTAGCAAACTTTGCGGATCGCG
ATACAGTTGCCGGCATCGCCGAAAACAATGAAGAAAACTTAAAAAAATGGCTGAAAGATCCTGAAAATATGAAACCAGGA
AATAAAATGACTGGTAAATATGGCAACTTAACAGACGATCAAATTGATGCATTAAATGCATACTTACAAACGTTAAAAGT
TGAAAAGTAA

Upstream 100 bases:

>100_bases
CTTCTAAGACAACGACATAATTGGATTTCTTTACGTTGAGATTTACTTTACTTAACTATAAAGTACAATCTAATTCACAA
GGAAAGTGGGGGTTGTTTGT

Downstream 100 bases:

>100_bases
AGAGGGATTATTCGCGAAGGGGAGGTTGAAAACGTGAGTTCTGTAGCAAAAAAACAGGGGATGGGTGCTGTCATATGGGA
TTATTTAACGACAGTAGACC

Product: cytochrome c oxidase, subunit II

Products: NA

Alternate protein names: Cytochrome aa3 subunit 2; Cytochrome c oxidase polypeptide II; Oxidase aa(3) subunit 2 [H]

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MKKQWRLLSFVSLLALLLGGCGKAFQSTLIPQGEVAKMQYDLLLLASAIMVGVVLVVTIIFLYVIVRFRQKKGQEDYIPE
QVEGNHKLEIIWTVIPIILLLILAVPTVTYTFKLADVSAMEKKNIDKDTIVVDVTANLYWWEFSYKSEKIVTSQDLVIPT
GKKVYLNLKGADIKHSFWVPSLAGKMDTNTDNVNKMWLKADKSGTYNGFCTEFCGPSHSLMQFKVKALDESEYKKWLADM
KKIDGKKEVASTKAQEGQEIFNKSCIGCHAVGSNDSRPPSARIAPNLANFADRDTVAGIAENNEENLKKWLKDPENMKPG
NKMTGKYGNLTDDQIDALNAYLQTLKVEK

Sequences:

>Translated_349_residues
MKKQWRLLSFVSLLALLLGGCGKAFQSTLIPQGEVAKMQYDLLLLASAIMVGVVLVVTIIFLYVIVRFRQKKGQEDYIPE
QVEGNHKLEIIWTVIPIILLLILAVPTVTYTFKLADVSAMEKKNIDKDTIVVDVTANLYWWEFSYKSEKIVTSQDLVIPT
GKKVYLNLKGADIKHSFWVPSLAGKMDTNTDNVNKMWLKADKSGTYNGFCTEFCGPSHSLMQFKVKALDESEYKKWLADM
KKIDGKKEVASTKAQEGQEIFNKSCIGCHAVGSNDSRPPSARIAPNLANFADRDTVAGIAENNEENLKKWLKDPENMKPG
NKMTGKYGNLTDDQIDALNAYLQTLKVEK
>Mature_349_residues
MKKQWRLLSFVSLLALLLGGCGKAFQSTLIPQGEVAKMQYDLLLLASAIMVGVVLVVTIIFLYVIVRFRQKKGQEDYIPE
QVEGNHKLEIIWTVIPIILLLILAVPTVTYTFKLADVSAMEKKNIDKDTIVVDVTANLYWWEFSYKSEKIVTSQDLVIPT
GKKVYLNLKGADIKHSFWVPSLAGKMDTNTDNVNKMWLKADKSGTYNGFCTEFCGPSHSLMQFKVKALDESEYKKWLADM
KKIDGKKEVASTKAQEGQEIFNKSCIGCHAVGSNDSRPPSARIAPNLANFADRDTVAGIAENNEENLKKWLKDPENMKPG
NKMTGKYGNLTDDQIDALNAYLQTLKVEK

Specific function: Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cytochrome c domain [H]

Homologues:

Organism=Escherichia coli, GI1786635, Length=245, Percent_Identity=27.3469387755102, Blast_Score=103, Evalue=2e-23,
Organism=Saccharomyces cerevisiae, GI6226540, Length=243, Percent_Identity=23.0452674897119, Blast_Score=73, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001505
- InterPro:   IPR008972
- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR014222
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759 [H]

Pfam domain/function: PF00116 COX2; PF02790 COX2_TM; PF00034 Cytochrom_C [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 39154; Mature: 39154

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50999 COX2_TM ; PS50857 COX2_CUA ; PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKQWRLLSFVSLLALLLGGCGKAFQSTLIPQGEVAKMQYDLLLLASAIMVGVVLVVTII
CCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FLYVIVRFRQKKGQEDYIPEQVEGNHKLEIIWTVIPIILLLILAVPTVTYTFKLADVSAM
HHHHHHHHHHHCCCCCCCCHHHCCCCEEEEHHHHHHHHHHHHHHHHHHEEEEEECCHHHH
EKKNIDKDTIVVDVTANLYWWEFSYKSEKIVTSQDLVIPTGKKVYLNLKGADIKHSFWVP
HHCCCCCCEEEEEEECCEEEEEEECCCCEEECCCCEEEECCCEEEEEECCCCCCCCCCCC
SLAGKMDTNTDNVNKMWLKADKSGTYNGFCTEFCGPSHSLMQFKVKALDESEYKKWLADM
HHCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHH
KKIDGKKEVASTKAQEGQEIFNKSCIGCHAVGSNDSRPPSARIAPNLANFADRDTVAGIA
HHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHCCCHHHHHHH
ENNEENLKKWLKDPENMKPGNKMTGKYGNLTDDQIDALNAYLQTLKVEK
CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKQWRLLSFVSLLALLLGGCGKAFQSTLIPQGEVAKMQYDLLLLASAIMVGVVLVVTII
CCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FLYVIVRFRQKKGQEDYIPEQVEGNHKLEIIWTVIPIILLLILAVPTVTYTFKLADVSAM
HHHHHHHHHHHCCCCCCCCHHHCCCCEEEEHHHHHHHHHHHHHHHHHHEEEEEECCHHHH
EKKNIDKDTIVVDVTANLYWWEFSYKSEKIVTSQDLVIPTGKKVYLNLKGADIKHSFWVP
HHCCCCCCEEEEEEECCEEEEEEECCCCEEECCCCEEEECCCEEEEEECCCCCCCCCCCC
SLAGKMDTNTDNVNKMWLKADKSGTYNGFCTEFCGPSHSLMQFKVKALDESEYKKWLADM
HHCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHH
KKIDGKKEVASTKAQEGQEIFNKSCIGCHAVGSNDSRPPSARIAPNLANFADRDTVAGIA
HHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHCCCHHHHHHH
ENNEENLKKWLKDPENMKPGNKMTGKYGNLTDDQIDALNAYLQTLKVEK
CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1964459 [H]