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The map label for this gene is yugJ [H]

Identifier: 218904845

GI number: 218904845

Start: 3562039

End: 3563202

Strand: Reverse

Name: yugJ [H]

Synonym: BCAH820_3729

Alternate gene names: 218904845

Gene position: 3563202-3562039 (Counterclockwise)

Preceding gene: 218904846

Following gene: 218904844

Centisome position: 67.2

GC content: 36.6

Gene sequence:

>1164_bases
ATGCAAAATTTTGTATTTCGTAATCCAACGAAACTTATTTTTGGTAAAGGTCAATTAGAACAGTTAAAAACTGAAATTCC
ACAGTTCGGTAAAAAAGTTCTTCTCGTATACGGGGGAGGCAGCATTAAAAGAAACGGTATTTATGATAATGTAATTTCTA
TTTTAAAGGAAATAAATGCAGAAGTATTTGAATTGACAGGTGTTGAACCGAATCCACGTGTATCAACTGTGAAGAAAGGG
ATTCAAATTTGTAAAGATAATGGTGTTGAATTTATTTTAGCAGTTGGTGGAGGTAGTGTAATCGACTGTACGAAGGCAAT
TGCAGTTGGTAGTAAGTACGATGGAGATGTGTGGGATATTGTAACGAAAAAAACATTTGCCAGTGAGGCATTACCATTTG
GTACTGTGCTTACTCTTGCGGCAACAGGATCTGAAATGAATGCTGGTTCTGTCATTACAAATTGGGAAACGAATGAAAAA
TATGGCTGGGGTAGCCCTGTTACTTTCCCGCAGTTTTCAATTTTAGATCCGGCCCATACTGCGTCTGTACCGAAAGATCA
AACAATTTACGGTATGGTAGATATTATGTCGCACGTATTAGAACAATATTTCCATCATGGAACAAATACAGAATTACAAG
ATCGTTATTGTGAATCTGTTTTAAAAACAGTAATTGAGACAGCTCCTAAGCTTTTAAGTGATCTAGAAAATTATGAGCAT
AGAGAAACGATTTTATATTGCGGTACTATGGCGTTAAACGGTATTTTAGCGATGGGGGTAAAAGGGGACTGGGCAACTCA
TAATATTGAGCATGCAGTTTCTGCGGTTCATGACATACCGCATGGAGGCGGCTTAGCTATTCTATTCCCGAACTGGATGA
AGCATGTTGTAGATGAAAATGTAAGTCGTTTTAAACAGTTTGCTATTCGTGTATTCGATGTAAAAACAGATGGAAAGACT
GATCGAGAAATTGCGTTAGAAGGAATTGAGGCGTTACGTCAATTTTGGAATTCAATTGAGGCACCAGTAACACTATCTGA
TTACGCTATTGGAGAAAATGAAATTGATGTAATGGCGGATAAAGCGATGGCTTATGGCGAATTTGGTAACTTTAAAAAAT
TAAATAAAGACGATGTTTTAAGCATATATAGAGCTTCCTTATAA

Upstream 100 bases:

>100_bases
GGCTGGGATTTTTTTGTTAGGCAAATATTTTTGTGAAATGAAAAAAATATGGTATACAAAAGTATAGTTGCTTTTCATAT
AGAAGGGATGGTAAAGGGAT

Downstream 100 bases:

>100_bases
GTGAATTGAGTAAAGAAACCCATTTGATATCACAATCAAATGGGTTTCTTTTTTGTTGTTTATAATCGTTTGTGATTGTT
TTTGATTATTTATGAATGTT

Product: alcohol dehydrogenase, iron-containing

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MQNFVFRNPTKLIFGKGQLEQLKTEIPQFGKKVLLVYGGGSIKRNGIYDNVISILKEINAEVFELTGVEPNPRVSTVKKG
IQICKDNGVEFILAVGGGSVIDCTKAIAVGSKYDGDVWDIVTKKTFASEALPFGTVLTLAATGSEMNAGSVITNWETNEK
YGWGSPVTFPQFSILDPAHTASVPKDQTIYGMVDIMSHVLEQYFHHGTNTELQDRYCESVLKTVIETAPKLLSDLENYEH
RETILYCGTMALNGILAMGVKGDWATHNIEHAVSAVHDIPHGGGLAILFPNWMKHVVDENVSRFKQFAIRVFDVKTDGKT
DREIALEGIEALRQFWNSIEAPVTLSDYAIGENEIDVMADKAMAYGEFGNFKKLNKDDVLSIYRASL

Sequences:

>Translated_387_residues
MQNFVFRNPTKLIFGKGQLEQLKTEIPQFGKKVLLVYGGGSIKRNGIYDNVISILKEINAEVFELTGVEPNPRVSTVKKG
IQICKDNGVEFILAVGGGSVIDCTKAIAVGSKYDGDVWDIVTKKTFASEALPFGTVLTLAATGSEMNAGSVITNWETNEK
YGWGSPVTFPQFSILDPAHTASVPKDQTIYGMVDIMSHVLEQYFHHGTNTELQDRYCESVLKTVIETAPKLLSDLENYEH
RETILYCGTMALNGILAMGVKGDWATHNIEHAVSAVHDIPHGGGLAILFPNWMKHVVDENVSRFKQFAIRVFDVKTDGKT
DREIALEGIEALRQFWNSIEAPVTLSDYAIGENEIDVMADKAMAYGEFGNFKKLNKDDVLSIYRASL
>Mature_387_residues
MQNFVFRNPTKLIFGKGQLEQLKTEIPQFGKKVLLVYGGGSIKRNGIYDNVISILKEINAEVFELTGVEPNPRVSTVKKG
IQICKDNGVEFILAVGGGSVIDCTKAIAVGSKYDGDVWDIVTKKTFASEALPFGTVLTLAATGSEMNAGSVITNWETNEK
YGWGSPVTFPQFSILDPAHTASVPKDQTIYGMVDIMSHVLEQYFHHGTNTELQDRYCESVLKTVIETAPKLLSDLENYEH
RETILYCGTMALNGILAMGVKGDWATHNIEHAVSAVHDIPHGGGLAILFPNWMKHVVDENVSRFKQFAIRVFDVKTDGKT
DREIALEGIEALRQFWNSIEAPVTLSDYAIGENEIDVMADKAMAYGEFGNFKKLNKDDVLSIYRASL

Specific function: Unknown

COG id: COG1979

COG function: function code C; Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iron-containing alcohol dehydrogenase family [H]

Homologues:

Organism=Escherichia coli, GI1789386, Length=391, Percent_Identity=38.1074168797954, Blast_Score=270, Evalue=9e-74,
Organism=Escherichia coli, GI48994951, Length=392, Percent_Identity=25.765306122449, Blast_Score=126, Evalue=3e-30,
Organism=Escherichia coli, GI1789163, Length=389, Percent_Identity=23.3933161953728, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI1787493, Length=333, Percent_Identity=25.2252252252252, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI87082107, Length=316, Percent_Identity=24.0506329113924, Blast_Score=82, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI17537053, Length=202, Percent_Identity=31.1881188118812, Blast_Score=87, Evalue=2e-17,
Organism=Saccharomyces cerevisiae, GI6321181, Length=380, Percent_Identity=23.6842105263158, Blast_Score=102, Evalue=7e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001670
- InterPro:   IPR018211 [H]

Pfam domain/function: PF00465 Fe-ADH [H]

EC number: 1.1.-.- [C]

Molecular weight: Translated: 42778; Mature: 42778

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: PS00913 ADH_IRON_1 ; PS00060 ADH_IRON_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNFVFRNPTKLIFGKGQLEQLKTEIPQFGKKVLLVYGGGSIKRNGIYDNVISILKEINA
CCCCCCCCCCEEEECCCHHHHHHHHHHHCCCEEEEEECCCCEECCCCHHHHHHHHHHCCC
EVFELTGVEPNPRVSTVKKGIQICKDNGVEFILAVGGGSVIDCTKAIAVGSKYDGDVWDI
CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCHHHH
VTKKTFASEALPFGTVLTLAATGSEMNAGSVITNWETNEKYGWGSPVTFPQFSILDPAHT
HHHHHHHHHCCCCHHEEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHH
ASVPKDQTIYGMVDIMSHVLEQYFHHGTNTELQDRYCESVLKTVIETAPKLLSDLENYEH
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
RETILYCGTMALNGILAMGVKGDWATHNIEHAVSAVHDIPHGGGLAILFPNWMKHVVDEN
HHHEEEEHHHHHCCHHEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHH
VSRFKQFAIRVFDVKTDGKTDREIALEGIEALRQFWNSIEAPVTLSDYAIGENEIDVMAD
HHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHH
KAMAYGEFGNFKKLNKDDVLSIYRASL
HHHHHCCCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MQNFVFRNPTKLIFGKGQLEQLKTEIPQFGKKVLLVYGGGSIKRNGIYDNVISILKEINA
CCCCCCCCCCEEEECCCHHHHHHHHHHHCCCEEEEEECCCCEECCCCHHHHHHHHHHCCC
EVFELTGVEPNPRVSTVKKGIQICKDNGVEFILAVGGGSVIDCTKAIAVGSKYDGDVWDI
CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCHHHH
VTKKTFASEALPFGTVLTLAATGSEMNAGSVITNWETNEKYGWGSPVTFPQFSILDPAHT
HHHHHHHHHCCCCHHEEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHH
ASVPKDQTIYGMVDIMSHVLEQYFHHGTNTELQDRYCESVLKTVIETAPKLLSDLENYEH
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
RETILYCGTMALNGILAMGVKGDWATHNIEHAVSAVHDIPHGGGLAILFPNWMKHVVDEN
HHHEEEEHHHHHCCHHEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHH
VSRFKQFAIRVFDVKTDGKTDREIALEGIEALRQFWNSIEAPVTLSDYAIGENEIDVMAD
HHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHH
KAMAYGEFGNFKKLNKDDVLSIYRASL
HHHHHCCCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]