Click here to switch to the map view.

The map label for this gene is ynbB [H]

Identifier: 218904831

GI number: 218904831

Start: 3547507

End: 3548778

Strand: Reverse

Name: ynbB [H]

Synonym: BCAH820_3715

Alternate gene names: 218904831

Gene position: 3548778-3547507 (Counterclockwise)

Preceding gene: 218904832

Following gene: 218904830

Centisome position: 66.92

GC content: 39.07

Gene sequence:

>1272_bases
ATGTTTGATCGTTTGAAAAATGGAAAAAAGATTGCTCCGATTGTAAAAGAAGTAGAGAGCCAAATTACAGAAGTACATAA
ACGTGCGGATGAAGTAATTGAAAGTAATCAGTTTCGTGTATTAGAAAGTTTTCGTAAACATAAAATTAGTGATTCACATT
TTATTCCGACGACAGGTTACGGTTATGACGATATTGGTCGTGATACGCTAGAAAAAGTGTATGCAGATGTATTTGGAGCG
GAAGCTGGCCTAGTTCGTCCGCAAATCATTTCAGGTACTCACGCTATTTCTACAGCGTTATTTGGTATTTTACGTCCAGG
AGATGAGTTATTGTACATCACTGGTAAGCCGTATGATACGTTAGAAGAAATCGTTGGTGTACGCGGAAAAGGTGTAGGTT
CATTTAAAGAATATAATATTGGTTATAATGCAGTTCCGCTTACTGAAGAGGGGCTTGTTGATTTAGGAGCTGTTGCGGCT
GCCATTCATAGTAATACGAAAATGATCGGTATTCAGCGCTCAAAAGGTTATGCTACTCGTCCGTCTTTTACTATTTCTCA
AATTAAAGAAATGATAGCGTTTGTTAAAGAAATTAAACCGGATGTTGTCGTGTTTGTAGATAACTGTTATGGCGAGTTTA
TTGAAGAACAAGAGCCATGTCATGTTGGTGCAGATTTAATGGCGGGTTCGCTTATTAAAAACCCGGGCGGGGGAATTGTT
AAAACTGGTGGTTATATTGTTGGTAAAGAACAGTATGTTGAAGCGTGTGCCTATCGTTTAACATCTCCAGGGATTGGTGC
GGAAGCAGGAGCATCTTTATACAGCCTGCAAGAAATGTATCAAGGTTTCTTCTTAGCGCCGCATGTAGCGGGACAAGCGC
TAAAAGGGGCGATTTTTACAGCTGCATTTTTAGAAAAGTTAGGAATGAATACTTCACCAGCATGGAATGCGCCAAGAACA
GATTTAATTCAATCTGTTCAATTTGATGATAAAGATCGTATGATTGCATTCTGCCAAGCGATTCAATATGCATCTCCGAT
TAATTCTCACTTCACTCCATATGCCAACTATATGCCGGGATATGAAGATGATGTAATTATGGCTGCGGGAACGTTTATTC
AAGGTGCAAGTATTGAATTGTCAGCCGATGGTCCGATTCGCCCGCCGTATGTTGCTTACGTGCAAGGCGGATTAACTTAT
TCACATGTGAAAATTGCGATTTGTTCTGCAATTGACGCATTAATTGAAAAAGAATTATTAACAATTTCTTAA

Upstream 100 bases:

>100_bases
GAAGATAAATTTGTGTATGATTGCGCAGGATATATTTTTGCTCATTCATCACTTAATGTGCAATTAAAGAGATTTTTAGT
GGAAGAAGGAGAAAATAAAA

Downstream 100 bases:

>100_bases
CGGGAAGCTGTCGATTTCGACAGCTTTTTTCGCATGAAAGTAATAATTTATTTCATTAGAAAAAAGAATGAAAAAATTTA
TAAAAAAATCATGTAAGAAA

Product: aluminum resistance protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MFDRLKNGKKIAPIVKEVESQITEVHKRADEVIESNQFRVLESFRKHKISDSHFIPTTGYGYDDIGRDTLEKVYADVFGA
EAGLVRPQIISGTHAISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGYNAVPLTEEGLVDLGAVAA
AIHSNTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEPCHVGADLMAGSLIKNPGGGIV
KTGGYIVGKEQYVEACAYRLTSPGIGAEAGASLYSLQEMYQGFFLAPHVAGQALKGAIFTAAFLEKLGMNTSPAWNAPRT
DLIQSVQFDDKDRMIAFCQAIQYASPINSHFTPYANYMPGYEDDVIMAAGTFIQGASIELSADGPIRPPYVAYVQGGLTY
SHVKIAICSAIDALIEKELLTIS

Sequences:

>Translated_423_residues
MFDRLKNGKKIAPIVKEVESQITEVHKRADEVIESNQFRVLESFRKHKISDSHFIPTTGYGYDDIGRDTLEKVYADVFGA
EAGLVRPQIISGTHAISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGYNAVPLTEEGLVDLGAVAA
AIHSNTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEPCHVGADLMAGSLIKNPGGGIV
KTGGYIVGKEQYVEACAYRLTSPGIGAEAGASLYSLQEMYQGFFLAPHVAGQALKGAIFTAAFLEKLGMNTSPAWNAPRT
DLIQSVQFDDKDRMIAFCQAIQYASPINSHFTPYANYMPGYEDDVIMAAGTFIQGASIELSADGPIRPPYVAYVQGGLTY
SHVKIAICSAIDALIEKELLTIS
>Mature_423_residues
MFDRLKNGKKIAPIVKEVESQITEVHKRADEVIESNQFRVLESFRKHKISDSHFIPTTGYGYDDIGRDTLEKVYADVFGA
EAGLVRPQIISGTHAISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGYNAVPLTEEGLVDLGAVAA
AIHSNTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEPCHVGADLMAGSLIKNPGGGIV
KTGGYIVGKEQYVEACAYRLTSPGIGAEAGASLYSLQEMYQGFFLAPHVAGQALKGAIFTAAFLEKLGMNTSPAWNAPRT
DLIQSVQFDDKDRMIAFCQAIQYASPINSHFTPYANYMPGYEDDVIMAAGTFIQGASIELSADGPIRPPYVAYVQGGLTY
SHVKIAICSAIDALIEKELLTIS

Specific function: Unknown

COG id: COG4100

COG function: function code P; Cystathionine beta-lyase family protein involved in aluminum resistance

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009651
- InterPro:   IPR015424
- InterPro:   IPR015421 [H]

Pfam domain/function: PF06838 Alum_res [H]

EC number: NA

Molecular weight: Translated: 46040; Mature: 46040

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDRLKNGKKIAPIVKEVESQITEVHKRADEVIESNQFRVLESFRKHKISDSHFIPTTGY
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCC
GYDDIGRDTLEKVYADVFGAEAGLVRPQIISGTHAISTALFGILRPGDELLYITGKPYDT
CCHHCCHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHCCCCCCEEEEECCCHHH
LEEIVGVRGKGVGSFKEYNIGYNAVPLTEEGLVDLGAVAAAIHSNTKMIGIQRSKGYATR
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCC
PSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEPCHVGADLMAGSLIKNPGGGIV
CCCHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEE
KTGGYIVGKEQYVEACAYRLTSPGIGAEAGASLYSLQEMYQGFFLAPHVAGQALKGAIFT
ECCCEEECHHHHHHHHHHHHCCCCCCCHHCHHHHHHHHHHCCEEECHHHHHHHHHHHHHH
AAFLEKLGMNTSPAWNAPRTDLIQSVQFDDKDRMIAFCQAIQYASPINSHFTPYANYMPG
HHHHHHHCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCC
YEDDVIMAAGTFIQGASIELSADGPIRPPYVAYVQGGLTYSHVKIAICSAIDALIEKELL
CCCCEEEEECCEEECCEEEEECCCCCCCCEEEEEECCCEEHHHHHHHHHHHHHHHHHHHH
TIS
CCC
>Mature Secondary Structure
MFDRLKNGKKIAPIVKEVESQITEVHKRADEVIESNQFRVLESFRKHKISDSHFIPTTGY
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCC
GYDDIGRDTLEKVYADVFGAEAGLVRPQIISGTHAISTALFGILRPGDELLYITGKPYDT
CCHHCCHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHCCCCCCEEEEECCCHHH
LEEIVGVRGKGVGSFKEYNIGYNAVPLTEEGLVDLGAVAAAIHSNTKMIGIQRSKGYATR
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCC
PSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEPCHVGADLMAGSLIKNPGGGIV
CCCHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEE
KTGGYIVGKEQYVEACAYRLTSPGIGAEAGASLYSLQEMYQGFFLAPHVAGQALKGAIFT
ECCCEEECHHHHHHHHHHHHCCCCCCCHHCHHHHHHHHHHCCEEECHHHHHHHHHHHHHH
AAFLEKLGMNTSPAWNAPRTDLIQSVQFDDKDRMIAFCQAIQYASPINSHFTPYANYMPG
HHHHHHHCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCC
YEDDVIMAAGTFIQGASIELSADGPIRPPYVAYVQGGLTYSHVKIAICSAIDALIEKELL
CCCCEEEEECCEEECCEEEEECCCCCCCCEEEEEECCCEEHHHHHHHHHHHHHHHHHHHH
TIS
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]