Click here to switch to the map view.

The map label for this gene is yvaA [H]

Identifier: 218904722

GI number: 218904722

Start: 3443806

End: 3444837

Strand: Reverse

Name: yvaA [H]

Synonym: BCAH820_3606

Alternate gene names: 218904722

Gene position: 3444837-3443806 (Counterclockwise)

Preceding gene: 218904723

Following gene: 218904720

Centisome position: 64.96

GC content: 35.66

Gene sequence:

>1032_bases
ATGAAAAAAATAGGTGTAGGGATTGTAGGGTTTGGATTTTCTAGTACAACATTTCACATCCCATTATTACAAACGATAGA
AGAATACGATATTCGTGCCGTATTATCTTCAAAAGAAGAGGTAGTAAAAGAAACATTACCGAATGCTAACGTCGTGAGTA
CAATTGATGAATTGGTGAAGCGAGCTGATATTGACTTAGTTGTTATTACTTCACCAAATACAACTCATTTTCCATATGTA
AAAGAAGCAATATTAAACGGTAAGCATGTTGTTGTAGAGAAACCATTTGTTGTTTCAATTGAAGAAGGAGAAGAGCTTAT
TTCATTAGCAGAGCAGCATAATGTCGTATTAAGTGTATATCATAATCGTCGTTTTGATAATGATTTCTTAACAATTAAGA
AATTATTAGAAGAAAATAGAATAGGGAACCTATACGCATATGAAGCGCATTTTGATCGCTTCCGTCCACATGTACGTGAT
CGCTGGAGAGAAAAGAACTTACCAGGATCAGGTATATTATATGACTTAGGCTCGCATTTAATTGACCAAGCATTATCATT
ATTTGGGAAACCAGACGCGATACGTGCAGATATAATCAAACAACGCCCAGGTGCAGAGGTGGATGATTATTTCCACATAG
TACTTCATTACGGAGTTAAACGTGTCATTTTACGTAGTAGCAGTTATGTGAAAAAGGCAGGTCCACACTTTACAATGCAT
GGGGATAAAGGTTCTATCGTGAAATATGGTATGGATTCACAGGAAGAACAATTAAAAAATGGAATGAAGCCAGGGGATAA
CGGTTACGGAGTAGATACTGAAGCTAATTTTGCTACTGTAGAAACAGAAGAAGAGTTAGTACGTATTCCAACAGAAGTTG
GCTGTTATGACATGTATTATAAAAGGGTAAGGGATAGTATTGTAAATGGTGAGAAACCACCTGTAACAGCGCAAGAAGGT
TTAGAAGTAATTAAGTTGATTCAATTGGCGGTTGAAAGTAGTGAAACAGGTAGGATCATATTTATAAAATAA

Upstream 100 bases:

>100_bases
ATCTTGTTATAATAACTGAATGAAATCGTTCTCATGAAGTGGAACTTTAATCAGTGGGGGTCTTACTGCCCACAAATAGC
GGGATAAATGGAGGGGCAAC

Downstream 100 bases:

>100_bases
AAAGACACGAGTTTCGTGTCTTTTTATTTTTGTGGAACAGAAAGACCATAGAAAAACATAGTGATAATATCTTGAATATG
TTTTTCACGATCCCCTTCAA

Product: oxidoreductase, Gfo/Idh/MocA family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MKKIGVGIVGFGFSSTTFHIPLLQTIEEYDIRAVLSSKEEVVKETLPNANVVSTIDELVKRADIDLVVITSPNTTHFPYV
KEAILNGKHVVVEKPFVVSIEEGEELISLAEQHNVVLSVYHNRRFDNDFLTIKKLLEENRIGNLYAYEAHFDRFRPHVRD
RWREKNLPGSGILYDLGSHLIDQALSLFGKPDAIRADIIKQRPGAEVDDYFHIVLHYGVKRVILRSSSYVKKAGPHFTMH
GDKGSIVKYGMDSQEEQLKNGMKPGDNGYGVDTEANFATVETEEELVRIPTEVGCYDMYYKRVRDSIVNGEKPPVTAQEG
LEVIKLIQLAVESSETGRIIFIK

Sequences:

>Translated_343_residues
MKKIGVGIVGFGFSSTTFHIPLLQTIEEYDIRAVLSSKEEVVKETLPNANVVSTIDELVKRADIDLVVITSPNTTHFPYV
KEAILNGKHVVVEKPFVVSIEEGEELISLAEQHNVVLSVYHNRRFDNDFLTIKKLLEENRIGNLYAYEAHFDRFRPHVRD
RWREKNLPGSGILYDLGSHLIDQALSLFGKPDAIRADIIKQRPGAEVDDYFHIVLHYGVKRVILRSSSYVKKAGPHFTMH
GDKGSIVKYGMDSQEEQLKNGMKPGDNGYGVDTEANFATVETEEELVRIPTEVGCYDMYYKRVRDSIVNGEKPPVTAQEG
LEVIKLIQLAVESSETGRIIFIK
>Mature_343_residues
MKKIGVGIVGFGFSSTTFHIPLLQTIEEYDIRAVLSSKEEVVKETLPNANVVSTIDELVKRADIDLVVITSPNTTHFPYV
KEAILNGKHVVVEKPFVVSIEEGEELISLAEQHNVVLSVYHNRRFDNDFLTIKKLLEENRIGNLYAYEAHFDRFRPHVRD
RWREKNLPGSGILYDLGSHLIDQALSLFGKPDAIRADIIKQRPGAEVDDYFHIVLHYGVKRVILRSSSYVKKAGPHFTMH
GDKGSIVKYGMDSQEEQLKNGMKPGDNGYGVDTEANFATVETEEELVRIPTEVGCYDMYYKRVRDSIVNGEKPPVTAQEG
LEVIKLIQLAVESSETGRIIFIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI87081947, Length=337, Percent_Identity=44.8071216617211, Blast_Score=301, Evalue=5e-83,
Organism=Escherichia coli, GI1789848, Length=346, Percent_Identity=33.8150289017341, Blast_Score=201, Evalue=7e-53,
Organism=Escherichia coli, GI1787574, Length=192, Percent_Identity=27.6041666666667, Blast_Score=71, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24581117, Length=253, Percent_Identity=27.6679841897233, Blast_Score=80, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 38745; Mature: 38745

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIGVGIVGFGFSSTTFHIPLLQTIEEYDIRAVLSSKEEVVKETLPNANVVSTIDELVK
CCCCCEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
RADIDLVVITSPNTTHFPYVKEAILNGKHVVVEKPFVVSIEEGEELISLAEQHNVVLSVY
HCCCCEEEEECCCCCCCHHHHHHHHCCCEEEEECCEEEEECCCHHHHHHHHHCCEEEEEE
HNRRFDNDFLTIKKLLEENRIGNLYAYEAHFDRFRPHVRDRWREKNLPGSGILYDLGSHL
ECCCCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHCHHHHHHHHHCCCCCCCHHHHHHHHH
IDQALSLFGKPDAIRADIIKQRPGAEVDDYFHIVLHYGVKRVILRSSSYVKKAGPHFTMH
HHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEE
GDKGSIVKYGMDSQEEQLKNGMKPGDNGYGVDTEANFATVETEEELVRIPTEVGCYDMYY
CCCCCEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCEEEEECHHHHHCCCCCCCHHHHHH
KRVRDSIVNGEKPPVTAQEGLEVIKLIQLAVESSETGRIIFIK
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEC
>Mature Secondary Structure
MKKIGVGIVGFGFSSTTFHIPLLQTIEEYDIRAVLSSKEEVVKETLPNANVVSTIDELVK
CCCCCEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
RADIDLVVITSPNTTHFPYVKEAILNGKHVVVEKPFVVSIEEGEELISLAEQHNVVLSVY
HCCCCEEEEECCCCCCCHHHHHHHHCCCEEEEECCEEEEECCCHHHHHHHHHCCEEEEEE
HNRRFDNDFLTIKKLLEENRIGNLYAYEAHFDRFRPHVRDRWREKNLPGSGILYDLGSHL
ECCCCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHCHHHHHHHHHCCCCCCCHHHHHHHHH
IDQALSLFGKPDAIRADIIKQRPGAEVDDYFHIVLHYGVKRVILRSSSYVKKAGPHFTMH
HHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEE
GDKGSIVKYGMDSQEEQLKNGMKPGDNGYGVDTEANFATVETEEELVRIPTEVGCYDMYY
CCCCCEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCEEEEECHHHHHCCCCCCCHHHHHH
KRVRDSIVNGEKPPVTAQEGLEVIKLIQLAVESSETGRIIFIK
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]