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The map label for this gene is uidR [C]

Identifier: 218904721

GI number: 218904721

Start: 3443189

End: 3443782

Strand: Direct

Name: uidR [C]

Synonym: BCAH820_3605

Alternate gene names: 218904721

Gene position: 3443189-3443782 (Clockwise)

Preceding gene: 218904717

Following gene: 218904731

Centisome position: 64.93

GC content: 30.13

Gene sequence:

>594_bases
TTGAATGGCTTTGAAAAAGTGAAAGAAAAGAAAAAACGCGCTATTAAAGAGGCAGCTTTCTTATTATTTTCAGAACGTGG
ATTTAATGAAGTAAAAATAGAACATATCGCAAAAGAAGCAAACGTTTCTCAAGTTACAATTTATAATCATTTTGGAAGTA
AAGATGCGTTATTTAGAGAACTTATACAAGAATTTATCATATGTGAATTTCAATATTATAAAGAACTTGCTGAAGAAAAA
TTACCTTTCCATGACATGATGCAAAAAATGATTGTACGAAAAATGAATACTGGCGGGTTATTTCAACCTGATATGTTACT
ACAAATGATGCAAAGAGACGAAATTCTCCGAGAGTTTATTTATAGTTATCAAAATGAAAAAATACTGCCATGGTATTTAG
AAATATTAGAACGAGCGCAGCGCAATAATGAAATTAATCCTCATCTTACTAAAGAAATGATGTTACTTTACATTCAAATG
TTTACTAAATTAGGTGATGATTTCGGGGCACAGCTTCTTGAAGGGGATCGTGAAAAACATATTCAAGATATTATCACTAT
GTTTTTCTATGGTCTTTCTGTTCCACAAAAATAA

Upstream 100 bases:

>100_bases
TCCATATTCGCAACAACTTTTTGAAATATTTATATGTCCATATTTCAAAAATATTGTTTCCACCTATATTTTCCTGTATA
TTTTTATTGAGGTGATTGTA

Downstream 100 bases:

>100_bases
AAAGACACGAAACTCGTGTCTTTTTATTTTATAAATATGATCCTACCTGTTTCACTACTTTCAACCGCCAATTGAATCAA
CTTAATTACTTCTAAACCTT

Product: transcriptional regulator, TetR family

Products: NA

Alternate protein names: TetR Family Transcriptional Regulator; Transcriptional Regulator

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MNGFEKVKEKKKRAIKEAAFLLFSERGFNEVKIEHIAKEANVSQVTIYNHFGSKDALFRELIQEFIICEFQYYKELAEEK
LPFHDMMQKMIVRKMNTGGLFQPDMLLQMMQRDEILREFIYSYQNEKILPWYLEILERAQRNNEINPHLTKEMMLLYIQM
FTKLGDDFGAQLLEGDREKHIQDIITMFFYGLSVPQK

Sequences:

>Translated_197_residues
MNGFEKVKEKKKRAIKEAAFLLFSERGFNEVKIEHIAKEANVSQVTIYNHFGSKDALFRELIQEFIICEFQYYKELAEEK
LPFHDMMQKMIVRKMNTGGLFQPDMLLQMMQRDEILREFIYSYQNEKILPWYLEILERAQRNNEINPHLTKEMMLLYIQM
FTKLGDDFGAQLLEGDREKHIQDIITMFFYGLSVPQK
>Mature_197_residues
MNGFEKVKEKKKRAIKEAAFLLFSERGFNEVKIEHIAKEANVSQVTIYNHFGSKDALFRELIQEFIICEFQYYKELAEEK
LPFHDMMQKMIVRKMNTGGLFQPDMLLQMMQRDEILREFIYSYQNEKILPWYLEILERAQRNNEINPHLTKEMMLLYIQM
FTKLGDDFGAQLLEGDREKHIQDIITMFFYGLSVPQK

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23609; Mature: 23609

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGFEKVKEKKKRAIKEAAFLLFSERGFNEVKIEHIAKEANVSQVTIYNHFGSKDALFRE
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHH
LIQEFIICEFQYYKELAEEKLPFHDMMQKMIVRKMNTGGLFQPDMLLQMMQRDEILREFI
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
YSYQNEKILPWYLEILERAQRNNEINPHLTKEMMLLYIQMFTKLGDDFGAQLLEGDREKH
HHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHH
IQDIITMFFYGLSVPQK
HHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNGFEKVKEKKKRAIKEAAFLLFSERGFNEVKIEHIAKEANVSQVTIYNHFGSKDALFRE
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHH
LIQEFIICEFQYYKELAEEKLPFHDMMQKMIVRKMNTGGLFQPDMLLQMMQRDEILREFI
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
YSYQNEKILPWYLEILERAQRNNEINPHLTKEMMLLYIQMFTKLGDDFGAQLLEGDREKH
HHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHH
IQDIITMFFYGLSVPQK
HHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA